RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 NOD1Q9Y239 953 aa7.78□□□□□ -1.16
CBWD1-216ENST00000489272 HMX2A2RU54 273 aa7.77□□□□□ -1.17
CBWD1-216ENST00000489272 CPB1P15086 417 aa7.77□□□□□ -1.17
CBWD1-216ENST00000489272 HOXA10P31260 410 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-216ENST00000489272 SHKBP1Q8TBC3 707 aa7.77□□□□□ -1.17
CBWD1-216ENST00000489272 ANKIB1Q9P2G1 1089 aa7.77□□□□□ -1.17
CBWD1-216ENST00000489272 SFI1A8K8P3 1242 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 GTF2IP78347 998 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 PSME1Q06323 249 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 NCOA4Q13772 614 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 PKN1Q16512 942 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 PCSK7Q16549 785 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 PERM1Q5SV97 790 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 SCHIP1Q9P0W5 487 aaPredicted RBP7.76□□□□□ -1.17
CBWD1-216ENST00000489272 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
CBWD1-216ENST00000489272 USP17L5A8MUK1 530 aa7.75□□□□□ -1.17
CBWD1-216ENST00000489272 COL19A1Q14993 1142 aa7.75□□□□□ -1.17
CBWD1-216ENST00000489272 HSH2DQ96JZ2 352 aa7.75□□□□□ -1.17
CBWD1-216ENST00000489272 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
CBWD1-216ENST00000489272 CCDC39Q9UFE4 941 aa7.75□□□□□ -1.17
CBWD1-216ENST00000489272 POM121CA8CG34 1229 aa7.74□□□□□ -1.17
CBWD1-216ENST00000489272 BACH1O14867 736 aa7.74□□□□□ -1.17
CBWD1-216ENST00000489272 UVSSAQ2YD98 709 aa7.74□□□□□ -1.17
CBWD1-216ENST00000489272 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.74□□□□□ -1.17
CBWD1-216ENST00000489272 JAG2Q9Y219 1238 aa7.74□□□□□ -1.17
CBWD1-216ENST00000489272 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
CBWD1-216ENST00000489272 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 ELMSAN1Q6PJG2 1045 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 NFXL1Q6ZNB6 911 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 DEPDC4Q8N2C3 294 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 DCAF11Q8TEB1 546 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 GSX2Q9BZM3 304 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
CBWD1-216ENST00000489272 ZNF232Q9UNY5 417 aa7.73□□□□□ -1.17
CBWD1-216ENST00000489272 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.73□□□□□ -1.17
CBWD1-216ENST00000489272 PRNPP04156 253 aa7.72□□□□□ -1.17
CBWD1-216ENST00000489272 TRIM50Q86XT4 487 aa7.72□□□□□ -1.17
CBWD1-216ENST00000489272 TP53INP2Q8IXH6 220 aa7.72□□□□□ -1.17
CBWD1-216ENST00000489272 UTP4Q969X6 686 aaKnown RBP7.72□□□□□ -1.17
CBWD1-216ENST00000489272 CEP41Q9BYV8 373 aa7.72□□□□□ -1.17
CBWD1-216ENST00000489272 PAPLNO95428 1278 aa7.71□□□□□ -1.18
CBWD1-216ENST00000489272 ADAMTS19Q8TE59 1207 aa7.71□□□□□ -1.18
CBWD1-216ENST00000489272 PNMA5Q96PV4 448 aa7.71□□□□□ -1.18
CBWD1-216ENST00000489272 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
CBWD1-216ENST00000489272 PIM2Q9P1W9 311 aa7.71□□□□□ -1.18
CBWD1-216ENST00000489272 USP17L3A6NCW0 530 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 USP17L4A6NCW7 530 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 NFKB1P19838 968 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 MSMPQ1L6U9 139 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 HDGFL1Q5TGJ6 251 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 C1orf53Q5VUE5 145 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 USP17L2Q6R6M4 530 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 USP17L1Q7RTZ2 530 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 PLEKHM2Q8IWE5 1019 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.7□□□□□ -1.18
CBWD1-216ENST00000489272 ZNF280CQ8ND82 737 aa7.7□□□□□ -1.18
CBWD1-216ENST00000489272 ATP1A2P50993 1020 aa7.69□□□□□ -1.18
CBWD1-216ENST00000489272 VSIG10LQ86VR7 867 aa7.69□□□□□ -1.18
CBWD1-216ENST00000489272 CLEC10AQ8IUN9 316 aa7.69□□□□□ -1.18
CBWD1-216ENST00000489272 MAP4K3Q8IVH8 894 aa7.69□□□□□ -1.18
CBWD1-216ENST00000489272 FAM46AQ96IP4 442 aaKnown RBP7.69□□□□□ -1.18
CBWD1-216ENST00000489272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
CBWD1-216ENST00000489272 SERTM1A2A2V5 107 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 ATP9BO43861 1147 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 SH3PXD2AQ5TCZ1 1133 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 TPCN2Q8NHX9 752 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 SUSD3Q96L08 255 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 MYRFLQ96LU7 910 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 FAM83CQ9BQN1 747 aa7.68□□□□□ -1.18
CBWD1-216ENST00000489272 WDR64B1ANS9 1081 aa7.67□□□□□ -1.18
CBWD1-216ENST00000489272 ZBTB42B2RXF5 422 aa7.67□□□□□ -1.18
CBWD1-216ENST00000489272 CCINQ13939 588 aa7.67□□□□□ -1.18
CBWD1-216ENST00000489272 SETDB1Q15047 1291 aa7.67□□□□□ -1.18
CBWD1-216ENST00000489272 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
CBWD1-216ENST00000489272 KSR1Q8IVT5 923 aa7.67□□□□□ -1.18
CBWD1-216ENST00000489272 CLUAP1Q96AJ1 413 aa7.67□□□□□ -1.18
CBWD1-216ENST00000489272 EPHA4P54764 986 aa7.66□□□□□ -1.18
CBWD1-216ENST00000489272 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
CBWD1-216ENST00000489272 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
CBWD1-216ENST00000489272 TRPM4Q8TD43 1214 aa7.66□□□□□ -1.18
CBWD1-216ENST00000489272 SMG9Q9H0W8 520 aaKnown RBP7.66□□□□□ -1.18
CBWD1-216ENST00000489272 MAP3K6O95382 1288 aa7.65□□□□□ -1.18
CBWD1-216ENST00000489272 CLDN10P78369 228 aa7.65□□□□□ -1.18
CBWD1-216ENST00000489272 CCDC102BQ68D86 513 aa7.65□□□□□ -1.18
CBWD1-216ENST00000489272 GLMNQ92990 594 aa7.65□□□□□ -1.18
CBWD1-216ENST00000489272 KIAA1024Q9UPX6 916 aa7.65□□□□□ -1.18
CBWD1-216ENST00000489272 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
CBWD1-216ENST00000489272 CARMIL2Q6F5E8 1435 aa7.64□□□□□ -1.19
CBWD1-216ENST00000489272 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
CBWD1-216ENST00000489272 FAM20CQ8IXL6 584 aa7.64□□□□□ -1.19
CBWD1-216ENST00000489272 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
CBWD1-216ENST00000489272 LARGE2Q8N3Y3 721 aa7.64□□□□□ -1.19
CBWD1-216ENST00000489272 OGFOD1Q8N543 542 aa7.64□□□□□ -1.19
CBWD1-216ENST00000489272 MKRN1Q9UHC7 482 aaKnown RBP7.64□□□□□ -1.19
CBWD1-216ENST00000489272 PALM3A6NDB9 673 aaPredicted RBP7.63□□□□□ -1.19
CBWD1-216ENST00000489272 FOSL1P15407 271 aa7.63□□□□□ -1.19
CBWD1-216ENST00000489272 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
CBWD1-216ENST00000489272 AGBL5Q8NDL9 886 aa7.63□□□□□ -1.19
CBWD1-216ENST00000489272 LEMD3Q9Y2U8 911 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms