RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
USP11-211ENST00000489111 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
USP11-211ENST00000489111 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
USP11-211ENST00000489111 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
USP11-211ENST00000489111 RGPD4Q7Z3J3 1758 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 CIAO1O76071 339 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 ITGA6P23229 1130 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 IL15P40933 162 aaPredicted RBP12.31□□□□□ -0.44
USP11-211ENST00000489111 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
USP11-211ENST00000489111 ERFEQ4G0M1 354 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 AACSQ86V21 672 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 GREM2Q9H772 168 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 AOX1Q06278 1338 aa12.31□□□□□ -0.44
USP11-211ENST00000489111 EP400Q96L91 3159 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 EYA2O00167 538 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 SASH1O94885 1247 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 GYS1P13807 737 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 PDE1AP54750 535 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 NFIXQ14938 502 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 EZH2Q15910 746 aaKnown RBP12.3□□□□□ -0.44
USP11-211ENST00000489111 CNBD1Q8NA66 436 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
USP11-211ENST00000489111 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
USP11-211ENST00000489111 TFCP2Q12800 502 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 C8orf34Q49A92 452 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 OSBPL3Q9H4L5 887 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 STAP2Q9UGK3 403 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 NUP98P52948 1817 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 SALL3Q9BXA9 1300 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 RTL9Q8NET4 1388 aa12.29□□□□□ -0.44
USP11-211ENST00000489111 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
USP11-211ENST00000489111 ERC2O15083 957 aa12.28□□□□□ -0.44
USP11-211ENST00000489111 ST5P78524 1137 aa12.28□□□□□ -0.44
USP11-211ENST00000489111 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
USP11-211ENST00000489111 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
USP11-211ENST00000489111 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
USP11-211ENST00000489111 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
USP11-211ENST00000489111 GSPT1P15170 499 aaKnown RBP12.27□□□□□ -0.45
USP11-211ENST00000489111 IGHMBP2P38935 993 aaKnown RBP12.27□□□□□ -0.45
USP11-211ENST00000489111 LRRC24Q50LG9 513 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 TNNI3KQ59H18 835 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 METTL24Q5JXM2 366 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 SLC10A5Q5PT55 438 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 COL23A1Q86Y22 540 aaPredicted RBP12.27□□□□□ -0.45
USP11-211ENST00000489111 CCDC125Q86Z20 511 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 NLGN1Q8N2Q7 840 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 NLRP3Q96P20 1036 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 MPHOSPH8Q99549 860 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
USP11-211ENST00000489111 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 FPGT-TNNI3KV9GXZ4 949 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
USP11-211ENST00000489111 COL24A1Q17RW2 1714 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 CDC45O75419 566 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 GLRX3O76003 335 aaKnown RBP12.26□□□□□ -0.45
USP11-211ENST00000489111 SF3B3Q15393 1217 aaKnown RBP12.26□□□□□ -0.45
USP11-211ENST00000489111 SLC15A2Q16348 729 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 CASC1Q6TDU7 716 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 EAF2Q96CJ1 260 aaPredicted RBP12.26□□□□□ -0.45
USP11-211ENST00000489111 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
USP11-211ENST00000489111 CCDC8Q9H0W5 538 aaPredicted RBP12.26□□□□□ -0.45
USP11-211ENST00000489111 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
USP11-211ENST00000489111 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 SERPINB2P05120 415 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
USP11-211ENST00000489111 SEC31BQ9NQW1 1179 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 TLR7Q9NYK1 1049 aaKnown RBP12.25□□□□□ -0.45
USP11-211ENST00000489111 MROH5Q6ZUA9 1318 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 ZNF609O15014 1411 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 RIC1Q4ADV7 1423 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 LRP5O75197 1615 aa12.25□□□□□ -0.45
USP11-211ENST00000489111 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
USP11-211ENST00000489111 EIF5BO60841 1220 aaKnown RBP12.24□□□□□ -0.45
USP11-211ENST00000489111 SDSP20132 328 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 TM4SF1P30408 202 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 DDR1Q08345 913 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 PRR5LQ6MZQ0 368 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 ANKRD18AQ8IVF6 992 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
USP11-211ENST00000489111 LAMB2P55268 1798 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 ATP2B3Q16720 1220 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
USP11-211ENST00000489111 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
USP11-211ENST00000489111 RILPL2Q969X0 211 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms