RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 INHAP05111 366 aa11.61□□□□□ -0.55
TRAPPC12-221ENST00000489032 SWI5Q1ZZU3 235 aa11.61□□□□□ -0.55
TRAPPC12-221ENST00000489032 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
TRAPPC12-221ENST00000489032 AGBL1Q96MI9 1066 aa11.61□□□□□ -0.55
TRAPPC12-221ENST00000489032 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
TRAPPC12-221ENST00000489032 ATRNO75882 1429 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 MEN1O00255 615 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 ETNK1Q9HBU6 452 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 ZNF358Q9NW07 568 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 CCDC144AA2RUR9 1427 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 MST1RQ04912 1400 aa11.6□□□□□ -0.55
TRAPPC12-221ENST00000489032 A0A1W2PRU2 124 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 TMEM229AB2RXF0 380 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 M0R2N6 131 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 ZNF326Q5BKZ1 582 aaKnown RBP11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 MEIOBQ8N635 442 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 ZNF395Q9H8N7 513 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 ADAMTS13Q76LX8 1427 aa11.59□□□□□ -0.55
TRAPPC12-221ENST00000489032 TMEM88BA6NKF7 163 aa11.58□□□□□ -0.56
TRAPPC12-221ENST00000489032 WASLO00401 505 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC12-221ENST00000489032 SCNN1DP51172 638 aa11.58□□□□□ -0.56
TRAPPC12-221ENST00000489032 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
TRAPPC12-221ENST00000489032 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
TRAPPC12-221ENST00000489032 PTCH1Q13635 1447 aa11.58□□□□□ -0.56
TRAPPC12-221ENST00000489032 CARNS1A5YM72 827 aa11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 DKK1O94907 266 aa11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 STAU1O95793 577 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 AVPP01185 164 aa11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 SCARF1Q14162 830 aa11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 DEFB132Q7Z7B7 95 aa11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 TSEN2Q8NCE0 465 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 ESYT1Q9BSJ8 1104 aa11.57□□□□□ -0.56
TRAPPC12-221ENST00000489032 KIF1BO60333 1816 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 AXIN1O15169 862 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 BMP2P12643 396 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 CLN3Q13286 438 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 XAGE2Q96GT9 111 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 CLTCL1P53675 1640 aa11.56□□□□□ -0.56
TRAPPC12-221ENST00000489032 YY1P25490 414 aa11.55□□□□□ -0.56
TRAPPC12-221ENST00000489032 TLR1Q15399 786 aa11.55□□□□□ -0.56
TRAPPC12-221ENST00000489032 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
TRAPPC12-221ENST00000489032 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
TRAPPC12-221ENST00000489032 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-221ENST00000489032 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
TRAPPC12-221ENST00000489032 IL2RAP01589 272 aa11.54□□□□□ -0.56
TRAPPC12-221ENST00000489032 SMTNP53814 917 aa11.54□□□□□ -0.56
TRAPPC12-221ENST00000489032 C6orf118Q5T5N4 469 aa11.54□□□□□ -0.56
TRAPPC12-221ENST00000489032 POLMQ9NP87 494 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-221ENST00000489032 PTPRUQ92729 1446 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 A6NJY4 79 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 PRMT3O60678 531 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 BRD1O95696 1058 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 SLC27A3Q5K4L6 730 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 MRPL14Q6P1L8 145 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 CHMP3Q9Y3E7 222 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
TRAPPC12-221ENST00000489032 BCL9LQ86UU0 1499 aa11.52□□□□□ -0.56
TRAPPC12-221ENST00000489032 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
TRAPPC12-221ENST00000489032 ATP2B4P23634 1241 aa11.52□□□□□ -0.57
TRAPPC12-221ENST00000489032 CENPCQ03188 943 aa11.52□□□□□ -0.57
TRAPPC12-221ENST00000489032 RGL3Q3MIN7 710 aa11.52□□□□□ -0.57
TRAPPC12-221ENST00000489032 KDF1Q8NAX2 398 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-221ENST00000489032 LGR5O75473 907 aa11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 TMEM214Q6NUQ4 689 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 PRIMPOLQ96LW4 560 aa11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 ZSCAN10Q96SZ4 725 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 INSM2Q96T92 566 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
TRAPPC12-221ENST00000489032 LAMC1P11047 1609 aa11.5□□□□□ -0.57
TRAPPC12-221ENST00000489032 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
TRAPPC12-221ENST00000489032 SPINT1O43278 529 aa11.5□□□□□ -0.57
TRAPPC12-221ENST00000489032 VTI1AQ96AJ9 217 aa11.5□□□□□ -0.57
TRAPPC12-221ENST00000489032 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
TRAPPC12-221ENST00000489032 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 MARF1Q9Y4F3 1742 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 GPC1P35052 558 aa11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 BAG6P46379 1132 aa11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 GAS2L2Q8NHY3 880 aa11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 SCG3Q8WXD2 468 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 C1orf167Q5SNV9 1468 aa11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 BRWD3Q6RI45 1802 aa11.49□□□□□ -0.57
TRAPPC12-221ENST00000489032 CDK2AP1O14519 115 aa11.48□□□□□ -0.57
TRAPPC12-221ENST00000489032 SCHIP1Q9P0W5 487 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms