RNA–Protein interactions for RNA: ENST00000488985.1

RPS6KA1-208, Transcript of ribosomal protein S6 kinase A1, human

TSL 3

Gene RPS6KA1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS6KA1-208	ENST00000488985	BCL11A	Q9H165	835 aa		10.02	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PHAX	Q9H814	394 aa	Known RBP	10.02	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	LTBP3	Q9NS15	1303 aa		10.02	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	AFDN	P55196	1824 aa	Known RBP	10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	GRIPAP1	Q4V328	841 aa		10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	TSPYL6	Q8N831	410 aa		10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PANK1	Q8TE04	598 aa		10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	JDP2	Q8WYK2	163 aa		10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	CRAMP1	Q96RY5	1269 aa		10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	RRAGC	Q9HB90	399 aa		10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.01	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	GLTPD2	A6NH11	291 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	KIF3C	O14782	793 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	TOMM70	O94826	608 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	HOXA10	P31260	410 aa	Predicted RBP	10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	RGS3	P49796	1198 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SLC10A5	Q5PT55	438 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SYNE4	Q8N205	404 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	IL27	Q8NEV9	243 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ISCA1	Q9BUE6	129 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SMC4	Q9NTJ3	1288 aa		10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	CWC25	Q9NXE8	425 aa	Predicted RBP	10	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	IRS4	O14654	1257 aa	Predicted RBP	9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	BBOX1	O75936	387 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SLC4A2	P04920	1241 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	VEGFA	P15692	232 aa	Predicted RBP	9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	IARS	P41252	1262 aa	Known RBP	9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	FKBP5	Q13451	457 aa	Predicted RBP	9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	OLFM4	Q6UX06	510 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	C3orf67	Q6ZVT6	689 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SMC5	Q8IY18	1101 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	LARGE2	Q8N3Y3	721 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SUPT20H	Q8NEM7	779 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	C7orf43	Q8WVR3	580 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	GCC1	Q96CN9	775 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	FAM89A	Q96GI7	184 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	MAP3K2	Q9Y2U5	619 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ABCC4	O15439	1325 aa		9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	COL11A2	P13942	1736 aa	Predicted RBP	9.99	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PI4KAP2	A4QPH2	592 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PRELP	P51888	382 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	EIF6	P56537	245 aa	Known RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	EXOSC9	Q06265	439 aa	Known RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	TRIM28	Q13263	835 aa	Known RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	GRAP	Q13588	217 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	GSE1	Q14687	1217 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	DPP8	Q6V1X1	898 aa	Predicted RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	KSR2	Q6VAB6	950 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	TMC4	Q7Z404	712 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	NIM1K	Q8IY84	436 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PI4KAP1	Q8N8J0	262 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	CCDC191	Q8NCU4	936 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	RBM46	Q8TBY0	533 aa	Known RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	GRAPL	Q8TC17	118 aa	Predicted RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	TBC1D32	Q96NH3	1257 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PSMD1	Q99460	953 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	METTL22	Q9BUU2	404 aa	Predicted RBP	9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ZBTB40	Q9NUA8	1239 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ATP6V0A2	Q9Y487	856 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PCDHB15	Q9Y5E8	787 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ARFGEF1	Q9Y6D6	1849 aa		9.98	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	DLEC1	Q9Y238	1755 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	IQCA1L	A6NCM1	817 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PPIP5K2	O43314	1243 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	HSPA6	P17066	643 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	PTMS	P20962	102 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	FLII	Q13045	1269 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	NFKBIB	Q15653	356 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	CCDC152	Q4G0S7	254 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	SMC1B	Q8NDV3	1235 aa		9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	API5	Q9BZZ5	524 aa	Known RBP	9.97	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	BRCA1	P38398	1863 aa	Known RBP	9.96	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	ANKRD31	Q8N7Z5	1873 aa		9.96	□□□□□ -0.81
RPS6KA1-208	ENST00000488985	DDN	O94850	711 aa	Predicted RBP	9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	PCCA	P05165	728 aa	Predicted RBP	9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	TRIM27	P14373	513 aa		9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	FSTL1	Q12841	308 aa		9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	MPND	Q8N594	471 aa		9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	SSH1	Q8WYL5	1049 aa		9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	GJA3	Q9Y6H8	435 aa		9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.96	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	RLBP1	P12271	317 aa		9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	LMOD1	P29536	600 aa	Predicted RBP	9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	APLP1	P51693	650 aa		9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	SF3B3	Q15393	1217 aa	Known RBP	9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	SP8	Q8IXZ3	490 aa		9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	DNAAF4	Q8WXU2	420 aa		9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.95	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	ZNF541	Q9H0D2	1346 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985		G3V3G9	751 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	C6orf229	H3BNL8	230 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	PDE8A	O60658	829 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	VAMP4	O75379	141 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	NUCB1	Q02818	461 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	AOC3	Q16853	763 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	EAPP	Q56P03	285 aa	Predicted RBP	9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	DCAF8	Q5TAQ9	597 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	G2E3	Q7L622	706 aa		9.94	□□□□□ -0.82
RPS6KA1-208	ENST00000488985	ITPRIP	Q8IWB1	547 aa		9.94	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms