RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 EML1O00423 815 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 HMGB1P09429 215 aaKnown RBP5.44□□□□□ -1.54
PRPF4-203ENST00000488937 KCNQ4P56696 695 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 TEAD4Q15561 434 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 TSGA10IPQ3SY00 556 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 KSR1Q8IVT5 923 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 RHPN1Q8TCX5 695 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 L3MBTL2Q969R5 705 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 POM121Q96HA1 1249 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 UBE2OQ9C0C9 1292 aaKnown RBP5.44□□□□□ -1.54
PRPF4-203ENST00000488937 BRD7Q9NPI1 651 aa5.44□□□□□ -1.54
PRPF4-203ENST00000488937 TMEM229AB2RXF0 380 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 E9PSI1 815 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 DEAF1O75398 565 aaPredicted RBP5.43□□□□□ -1.54
PRPF4-203ENST00000488937 PPP1R15AO75807 674 aaPredicted RBP5.43□□□□□ -1.54
PRPF4-203ENST00000488937 PAPLNO95428 1278 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 TXLNAP40222 546 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 TTLL10Q6ZVT0 673 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 PUS7Q96PZ0 661 aaKnown RBP5.43□□□□□ -1.54
PRPF4-203ENST00000488937 SCHIP1Q9P0W5 487 aaPredicted RBP5.43□□□□□ -1.54
PRPF4-203ENST00000488937 KCNH4Q9UQ05 1017 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 AMOTL2Q9Y2J4 779 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 CHMP3Q9Y3E7 222 aa5.43□□□□□ -1.54
PRPF4-203ENST00000488937 TTBK1Q5TCY1 1321 aaPredicted RBP5.43□□□□□ -1.54
PRPF4-203ENST00000488937 PATL2C9JE40 543 aaKnown RBP5.42□□□□□ -1.54
PRPF4-203ENST00000488937 HSP90B1P14625 803 aaKnown RBP5.42□□□□□ -1.54
PRPF4-203ENST00000488937 NOS2P35228 1153 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 COL19A1Q14993 1142 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 PCSK7Q16549 785 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 CILP2Q8IUL8 1156 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 PLPP7Q8NBV4 271 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 CEP63Q96MT8 703 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 C7orf69Q9H7B7 122 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 CCDC39Q9UFE4 941 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 ZNF232Q9UNY5 417 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 PARP3Q9Y6F1 533 aa5.42□□□□□ -1.54
PRPF4-203ENST00000488937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
PRPF4-203ENST00000488937 PRNPP04156 253 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 ABL2P42684 1182 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 TBC1D8BQ0IIM8 1120 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 WASHC4Q2M389 1173 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 C1orf53Q5VUE5 145 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 SIAH1Q8IUQ4 282 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 TP53INP2Q8IXH6 220 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 BHMTQ93088 406 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 USP3Q9Y6I4 520 aa5.41□□□□□ -1.54
PRPF4-203ENST00000488937 SERTM1A2A2V5 107 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 GLB1P16278 677 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 PDE4CQ08493 712 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 GRIK5Q16478 980 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 HIF1AQ16665 826 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 BHLHE22Q8NFJ8 381 aaPredicted RBP5.4□□□□□ -1.54
PRPF4-203ENST00000488937 DCAF11Q8TEB1 546 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 UBL7Q96S82 380 aaPredicted RBP5.4□□□□□ -1.54
PRPF4-203ENST00000488937 SLC38A3Q99624 504 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 NAGPAQ9UK23 515 aa5.4□□□□□ -1.54
PRPF4-203ENST00000488937 LZTS3O60299 673 aaPredicted RBP5.39□□□□□ -1.55
PRPF4-203ENST00000488937 GRNP28799 593 aaKnown RBP5.39□□□□□ -1.55
PRPF4-203ENST00000488937 HOXA10P31260 410 aaPredicted RBP5.39□□□□□ -1.55
PRPF4-203ENST00000488937 VAC14Q08AM6 782 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 KCNA1Q09470 495 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 NFXL1Q6ZNB6 911 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 WFDC8Q8IUA0 241 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 ARMC10Q8N2F6 343 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 SHKBP1Q8TBC3 707 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 ZDHHC1Q8WTX9 485 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 TOX2Q96NM4 488 aa5.39□□□□□ -1.55
PRPF4-203ENST00000488937 HMX2A2RU54 273 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 SOX11P35716 441 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 EML3Q32P44 896 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 DBX2Q6ZNG2 339 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 LCNL1Q6ZST4 164 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 VSIG10LQ86VR7 867 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 PNMA5Q96PV4 448 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 IGFLR1Q9H665 355 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 CARMIL2Q6F5E8 1435 aa5.38□□□□□ -1.55
PRPF4-203ENST00000488937 CDK11BP21127 795 aaKnown RBP5.37□□□□□ -1.55
PRPF4-203ENST00000488937 CFPP27918 469 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 PSMA6P60900 246 aaKnown RBP5.37□□□□□ -1.55
PRPF4-203ENST00000488937 PSME1Q06323 249 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 TYRO3Q06418 890 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 MSMPQ1L6U9 139 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 UVSSAQ2YD98 709 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 SLC9A9Q8IVB4 645 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 ZSCAN18Q8TBC5 510 aaPredicted RBP5.37□□□□□ -1.55
PRPF4-203ENST00000488937 ALG2Q9H553 416 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 FRRS1LQ9P0K9 344 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 CDK11AQ9UQ88 783 aaPredicted RBP5.37□□□□□ -1.55
PRPF4-203ENST00000488937 NOD1Q9Y239 953 aa5.37□□□□□ -1.55
PRPF4-203ENST00000488937 SFI1A8K8P3 1242 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 BRD1O95696 1058 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 HIRAP54198 1017 aaPredicted RBP5.36□□□□□ -1.55
PRPF4-203ENST00000488937 SEMA3FQ13275 785 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 WWC1Q8IX03 1113 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 AGBL5Q8NDL9 886 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 C7orf43Q8WVR3 580 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 IGSF5Q9NSI5 407 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 ZNF358Q9NW07 568 aa5.36□□□□□ -1.55
PRPF4-203ENST00000488937 DNAJB12Q9NXW2 375 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms