RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 JARID2Q92833 1246 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-215ENST00000488920 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-215ENST00000488920 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
CCHCR1-215ENST00000488920 COL4A5P29400 1685 aa15.38■□□□□ 0.05
CCHCR1-215ENST00000488920 DDX58O95786 925 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 TWISTNBQ3B726 338 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 SUPT20HQ8NEM7 779 aa15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 IL16Q14005 1332 aa15.37■□□□□ 0.05
CCHCR1-215ENST00000488920 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
CCHCR1-215ENST00000488920 STK31Q9BXU1 1019 aa15.36■□□□□ 0.05
CCHCR1-215ENST00000488920 VPS33BQ9H267 617 aa15.36■□□□□ 0.05
CCHCR1-215ENST00000488920 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 ZNRF3Q9ULT6 936 aa15.35■□□□□ 0.05
CCHCR1-215ENST00000488920 PCCAP05165 728 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 LMOD1P29536 600 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 EPS15P42566 896 aa15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 CXCL9Q07325 125 aa15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 G2E3Q7L622 706 aa15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 WDR63Q8IWG1 891 aa15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 NSFL1CQ9UNZ2 370 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-215ENST00000488920 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 HSP90B1P14625 803 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 SCNN1DP51172 638 aa15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 FANCIQ9NVI1 1328 aa15.33■□□□□ 0.04
CCHCR1-215ENST00000488920 PDE8AO60658 829 aa15.32■□□□□ 0.04
CCHCR1-215ENST00000488920 RAD17O75943 681 aa15.32■□□□□ 0.04
CCHCR1-215ENST00000488920 IGKV5-2P06315 115 aa15.32■□□□□ 0.04
CCHCR1-215ENST00000488920 GPSM2P81274 684 aa15.32■□□□□ 0.04
CCHCR1-215ENST00000488920 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
CCHCR1-215ENST00000488920 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
CCHCR1-215ENST00000488920 C6orf229H3BNL8 230 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 EXOSC9Q06265 439 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 WASHC4Q2M389 1173 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 SPINK5Q9NQ38 1064 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 POLLQ9UGP5 575 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 PASKQ96RG2 1323 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 LAMB2P55268 1798 aa15.31■□□□□ 0.04
CCHCR1-215ENST00000488920 VAMP4O75379 141 aa15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 GMPSP49915 693 aaPredicted RBP15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 NEXNQ0ZGT2 675 aa15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 CIAPIN1Q6FI81 312 aa15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 GPRC5DQ9NZD1 345 aa15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 MKRN1Q9UHC7 482 aaKnown RBP15.3■□□□□ 0.04
CCHCR1-215ENST00000488920 SCN4AP35499 1836 aa15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 YDJCA8MPS7 323 aa15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 FLIIQ13045 1269 aa15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 TNIP1Q15025 636 aa15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 GPR101Q96P66 508 aaPredicted RBP15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
CCHCR1-215ENST00000488920 TMEM88BA6NKF7 163 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 FKBP5Q13451 457 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 USP50Q70EL3 339 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 TBC1D16Q8TBP0 767 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 DBNDD1Q9H9R9 158 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 ANKIB1Q9P2G1 1089 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 TAF1P21675 1872 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 COL4A1P02462 1669 aa15.28■□□□□ 0.04
CCHCR1-215ENST00000488920 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
CCHCR1-215ENST00000488920 CTSWP56202 376 aa15.27■□□□□ 0.04
CCHCR1-215ENST00000488920 EYA3Q99504 573 aa15.27■□□□□ 0.04
CCHCR1-215ENST00000488920 ADARB2Q9NS39 739 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-215ENST00000488920 H7C1W4 665 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 UBE3BQ7Z3V4 1068 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 TTLL11Q8NHH1 800 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 MYH16Q9H6N6 1097 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 KCNQ5Q9NR82 932 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
CCHCR1-215ENST00000488920 DUOX1Q9NRD9 1551 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 PSMD14O00487 310 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 ECE2O60344 883 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms