RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PDE8AO60658 829 aa13.46□□□□□ -0.25
COL21A1-211ENST00000488912 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
COL21A1-211ENST00000488912 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
COL21A1-211ENST00000488912 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
COL21A1-211ENST00000488912 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.26
COL21A1-211ENST00000488912 ZNF594Q96JF6 807 aaPredicted RBP13.46□□□□□ -0.26
COL21A1-211ENST00000488912 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
COL21A1-211ENST00000488912 MX1P20591 662 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 HMGB2P26583 209 aaKnown RBP13.45□□□□□ -0.26
COL21A1-211ENST00000488912 PDE1AP54750 535 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 GREM2Q9H772 168 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
COL21A1-211ENST00000488912 IFIT5Q13325 482 aaKnown RBP13.44□□□□□ -0.26
COL21A1-211ENST00000488912 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
COL21A1-211ENST00000488912 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
COL21A1-211ENST00000488912 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
COL21A1-211ENST00000488912 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
COL21A1-211ENST00000488912 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
COL21A1-211ENST00000488912 ITGA6P23229 1130 aa13.44□□□□□ -0.26
COL21A1-211ENST00000488912 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
COL21A1-211ENST00000488912 ATG9AQ7Z3C6 839 aa13.44□□□□□ -0.26
COL21A1-211ENST00000488912 ABCC12Q96J65 1359 aa13.43□□□□□ -0.26
COL21A1-211ENST00000488912 GYS1P13807 737 aa13.43□□□□□ -0.26
COL21A1-211ENST00000488912 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
COL21A1-211ENST00000488912 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
COL21A1-211ENST00000488912 EYA2O00167 538 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 LRP5O75197 1615 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 TFCP2Q12800 502 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 NFIXQ14938 502 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 AACSQ86V21 672 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 NBPF5PQ86XG9 351 aaPredicted RBP13.42□□□□□ -0.26
COL21A1-211ENST00000488912 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 PUS3Q9BZE2 481 aaKnown RBP13.42□□□□□ -0.26
COL21A1-211ENST00000488912 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 CARMIL3Q8ND23 1372 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
COL21A1-211ENST00000488912 NYXQ9GZU5 481 aa13.42□□□□□ -0.26
COL21A1-211ENST00000488912 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
COL21A1-211ENST00000488912 ANKRD18BA2A2Z9 1011 aa13.41□□□□□ -0.26
COL21A1-211ENST00000488912 CIAO1O76071 339 aa13.41□□□□□ -0.26
COL21A1-211ENST00000488912 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
COL21A1-211ENST00000488912 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
COL21A1-211ENST00000488912 TAF1P21675 1872 aa13.41□□□□□ -0.26
COL21A1-211ENST00000488912 IFIT2P09913 472 aaKnown RBP13.41□□□□□ -0.26
COL21A1-211ENST00000488912 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
COL21A1-211ENST00000488912 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
COL21A1-211ENST00000488912 TLR7Q9NYK1 1049 aaKnown RBP13.41□□□□□ -0.26
COL21A1-211ENST00000488912 TNRC6CQ9HCJ0 1690 aaKnown RBP13.41□□□□□ -0.26
COL21A1-211ENST00000488912 COL4A1P02462 1669 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 AOX1Q06278 1338 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 COL23A1Q86Y22 540 aaPredicted RBP13.4□□□□□ -0.26
COL21A1-211ENST00000488912 SDSP20132 328 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 TNNI3KQ59H18 835 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 CCDC8Q9H0W5 538 aaPredicted RBP13.4□□□□□ -0.26
COL21A1-211ENST00000488912 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 FPGT-TNNI3KV9GXZ4 949 aa13.4□□□□□ -0.26
COL21A1-211ENST00000488912 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.27
COL21A1-211ENST00000488912 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
COL21A1-211ENST00000488912 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 SEC31BQ9NQW1 1179 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 SEC24BO95487 1268 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 LDHAL6AQ6ZMR3 332 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 ZNF609O15014 1411 aa13.39□□□□□ -0.27
COL21A1-211ENST00000488912 QSER1Q2KHR3 1735 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 NPHP1O15259 732 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 BAG6P46379 1132 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 DBNLQ9UJU6 430 aaKnown RBP13.38□□□□□ -0.27
COL21A1-211ENST00000488912 TM4SF1P30408 202 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
COL21A1-211ENST00000488912 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 FLAD1Q8NFF5 587 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 GPATCH3Q96I76 525 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
COL21A1-211ENST00000488912 DDR1Q08345 913 aa13.37□□□□□ -0.27
COL21A1-211ENST00000488912 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
COL21A1-211ENST00000488912 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 TBC1D9Q6ZT07 1266 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 A0A1B0GUL6 1792 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 CDC45O75419 566 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 METTL24Q5JXM2 366 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
COL21A1-211ENST00000488912 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms