RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 HMMRO75330 724 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 LMBR1LQ6UX01 489 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
CHD1L-208ENST00000488864 GYS1P13807 737 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 HCLS1P14317 486 aaPredicted RBP16.23■□□□□ 0.19
CHD1L-208ENST00000488864 NUCB1Q02818 461 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
CHD1L-208ENST00000488864 KLHDC4Q8TBB5 520 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
CHD1L-208ENST00000488864 HDAC5Q9UQL6 1122 aa16.23■□□□□ 0.19
CHD1L-208ENST00000488864 ANKRD36CQ5JPF3 1778 aa16.22■□□□□ 0.19
CHD1L-208ENST00000488864 BCORQ6W2J9 1755 aa16.22■□□□□ 0.19
CHD1L-208ENST00000488864 IRS4O14654 1257 aaPredicted RBP16.22■□□□□ 0.19
CHD1L-208ENST00000488864 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
CHD1L-208ENST00000488864 FOXO4P98177 505 aa16.22■□□□□ 0.19
CHD1L-208ENST00000488864 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
CHD1L-208ENST00000488864 KIF2CQ99661 725 aa16.22■□□□□ 0.19
CHD1L-208ENST00000488864 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
CHD1L-208ENST00000488864 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
CHD1L-208ENST00000488864 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 PNPLA7Q6ZV29 1317 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 NTSR2O95665 410 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 NFIXQ14938 502 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
CHD1L-208ENST00000488864 ISY1Q9ULR0 285 aaKnown RBP16.21■□□□□ 0.19
CHD1L-208ENST00000488864 SH3TC1Q8TE82 1336 aa16.21■□□□□ 0.18
CHD1L-208ENST00000488864 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
CHD1L-208ENST00000488864 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
CHD1L-208ENST00000488864 RGPD3A6NKT7 1758 aaPredicted RBP16.2■□□□□ 0.18
CHD1L-208ENST00000488864 RGPD4Q7Z3J3 1758 aa16.2■□□□□ 0.18
CHD1L-208ENST00000488864 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
CHD1L-208ENST00000488864 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
CHD1L-208ENST00000488864 MTX1Q13505 466 aa16.2■□□□□ 0.18
CHD1L-208ENST00000488864 POLA2Q14181 598 aa16.2■□□□□ 0.18
CHD1L-208ENST00000488864 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-208ENST00000488864 CCDC125Q86Z20 511 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-208ENST00000488864 SIL1Q9H173 461 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 NPHP1O15259 732 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 RRP9O43818 475 aaKnown RBP16.19■□□□□ 0.18
CHD1L-208ENST00000488864 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-208ENST00000488864 UPF1Q92900 1129 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHD1L-208ENST00000488864 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 GBP4Q96PP9 640 aa16.19■□□□□ 0.18
CHD1L-208ENST00000488864 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-208ENST00000488864 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
CHD1L-208ENST00000488864 TRIM44Q96DX7 344 aaPredicted RBP16.18■□□□□ 0.18
CHD1L-208ENST00000488864 TUBGCP6Q96RT7 1819 aa16.18■□□□□ 0.18
CHD1L-208ENST00000488864 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
CHD1L-208ENST00000488864 GLIPR1L2Q4G1C9 344 aa16.18■□□□□ 0.18
CHD1L-208ENST00000488864 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
CHD1L-208ENST00000488864 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
CHD1L-208ENST00000488864 RGL2O15211 777 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 PDE8AO60658 829 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 CTSWP56202 376 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 GREM2Q9H772 168 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 OS9Q13438 667 aaPredicted RBP16.16■□□□□ 0.18
CHD1L-208ENST00000488864 BMP2KLQ5H9B9 411 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 PLA2G12BQ9BX93 195 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 ABCC12Q96J65 1359 aa16.16■□□□□ 0.18
CHD1L-208ENST00000488864 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
CHD1L-208ENST00000488864 PTPN12Q05209 780 aaKnown RBP16.15■□□□□ 0.18
CHD1L-208ENST00000488864 SKOR2Q2VWA4 1001 aaPredicted RBP16.15■□□□□ 0.18
CHD1L-208ENST00000488864 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
CHD1L-208ENST00000488864 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
CHD1L-208ENST00000488864 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
CHD1L-208ENST00000488864 DDR1Q08345 913 aa16.15■□□□□ 0.18
CHD1L-208ENST00000488864 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
CHD1L-208ENST00000488864 C16orf71Q8IYS4 520 aaPredicted RBP16.15■□□□□ 0.18
CHD1L-208ENST00000488864 IL1RAPL2Q9NP60 686 aa16.15■□□□□ 0.18
CHD1L-208ENST00000488864 CSF1RP07333 972 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 TM4SF1P30408 202 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 PKNOX2Q96KN3 472 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
CHD1L-208ENST00000488864 SERPINB2P05120 415 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 CNBD1Q8NA66 436 aa16.14■□□□□ 0.17
CHD1L-208ENST00000488864 ITGA6P23229 1130 aa16.13■□□□□ 0.17
CHD1L-208ENST00000488864 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
CHD1L-208ENST00000488864 ZMYND15Q9H091 742 aa16.13■□□□□ 0.17
CHD1L-208ENST00000488864 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
CHD1L-208ENST00000488864 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
CHD1L-208ENST00000488864 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
CHD1L-208ENST00000488864 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
CHD1L-208ENST00000488864 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.13■□□□□ 0.17
CHD1L-208ENST00000488864 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
CHD1L-208ENST00000488864 MMP10P09238 476 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms