RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 NUDT16Q96DE0 195 aaKnown RBP7.33□□□□□ -1.24
SSR1-209ENST00000488834 UBE2OQ9C0C9 1292 aaKnown RBP7.33□□□□□ -1.24
SSR1-209ENST00000488834 C11orf16Q9NQ32 467 aa7.33□□□□□ -1.24
SSR1-209ENST00000488834 OIP5O43482 229 aa7.32□□□□□ -1.24
SSR1-209ENST00000488834 HOXB4P17483 251 aaPredicted RBP7.32□□□□□ -1.24
SSR1-209ENST00000488834 TARSP26639 723 aaKnown RBP7.32□□□□□ -1.24
SSR1-209ENST00000488834 C8orf34Q49A92 452 aa7.32□□□□□ -1.24
SSR1-209ENST00000488834 GNEQ9Y223 722 aaKnown RBP7.32□□□□□ -1.24
SSR1-209ENST00000488834 MZF1P28698 734 aaPredicted RBP7.31□□□□□ -1.24
SSR1-209ENST00000488834 GRNP28799 593 aaKnown RBP7.31□□□□□ -1.24
SSR1-209ENST00000488834 RRAGCQ9HB90 399 aa7.31□□□□□ -1.24
SSR1-209ENST00000488834 BRPF3Q9ULD4 1205 aa7.31□□□□□ -1.24
SSR1-209ENST00000488834 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
SSR1-209ENST00000488834 ELOA3CA0A087WX78 387 aaPredicted RBP7.3□□□□□ -1.24
SSR1-209ENST00000488834 ELOA3DA6NLF2 546 aaPredicted RBP7.3□□□□□ -1.24
SSR1-209ENST00000488834 NDUFB5O43674 189 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 PDGFAP04085 211 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 PSAPP07602 524 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 EPXP11678 715 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 NPR3P17342 541 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 USP5P45974 858 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 ELOA3BQ3SY89 546 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 TTC39BQ5VTQ0 682 aaPredicted RBP7.3□□□□□ -1.24
SSR1-209ENST00000488834 ZNF438Q7Z4V0 828 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 NLRP13Q86W25 1043 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 FCHSD1Q86WN1 690 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 ELOA3Q8NG57 546 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 TMC1Q8TDI8 760 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 LRRC4BQ9NT99 713 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 POLIQ9UNA4 740 aa7.3□□□□□ -1.24
SSR1-209ENST00000488834 CNTNAP5Q8WYK1 1306 aa7.29□□□□□ -1.24
SSR1-209ENST00000488834 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
SSR1-209ENST00000488834 EGFRP00533 1210 aa7.29□□□□□ -1.24
SSR1-209ENST00000488834 ADH7P40394 386 aa7.29□□□□□ -1.24
SSR1-209ENST00000488834 MARSP56192 900 aaKnown RBP7.29□□□□□ -1.24
SSR1-209ENST00000488834 SNRPNP63162 240 aaKnown RBP7.29□□□□□ -1.24
SSR1-209ENST00000488834 TRIP4Q15650 581 aaPredicted RBP7.29□□□□□ -1.24
SSR1-209ENST00000488834 PCSK7Q16549 785 aa7.29□□□□□ -1.24
SSR1-209ENST00000488834 MAP3K6O95382 1288 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 ITGB2P05107 769 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 DHX32Q7L7V1 743 aaKnown RBP7.28□□□□□ -1.24
SSR1-209ENST00000488834 PODNQ7Z5L7 613 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 TNFRSF25Q93038 417 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 CCDC87Q9NVE4 849 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 DNAJB12Q9NXW2 375 aaKnown RBP7.28□□□□□ -1.24
SSR1-209ENST00000488834 ZFATQ9P243 1243 aa7.28□□□□□ -1.24
SSR1-209ENST00000488834 IRS1P35568 1242 aa7.27□□□□□ -1.25
SSR1-209ENST00000488834 RASSF7Q02833 373 aa7.27□□□□□ -1.25
SSR1-209ENST00000488834 PLAURQ03405 335 aa7.27□□□□□ -1.25
SSR1-209ENST00000488834 EHHADHQ08426 723 aa7.27□□□□□ -1.25
SSR1-209ENST00000488834 PDE12Q6L8Q7 609 aaKnown RBP7.27□□□□□ -1.25
SSR1-209ENST00000488834 ELP3Q9H9T3 547 aa7.27□□□□□ -1.25
SSR1-209ENST00000488834 A6NHS1 94 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 ADARB2-AS1A8MUL3 147 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 PHF20L1A8MW92 1017 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 FZD6O60353 706 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 MMP20O60882 483 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 MLLT1Q03111 559 aaPredicted RBP7.26□□□□□ -1.25
SSR1-209ENST00000488834 CHSY3Q70JA7 882 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 FAM35AQ86V20 835 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 BTBD6Q96KE9 485 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 ABI2Q9NYB9 513 aaPredicted RBP7.26□□□□□ -1.25
SSR1-209ENST00000488834 TLR7Q9NYK1 1049 aaKnown RBP7.26□□□□□ -1.25
SSR1-209ENST00000488834 SLC6A14Q9UN76 642 aa7.26□□□□□ -1.25
SSR1-209ENST00000488834 ARHGAP4P98171 946 aa7.25□□□□□ -1.25
SSR1-209ENST00000488834 PDE3BQ13370 1112 aa7.25□□□□□ -1.25
SSR1-209ENST00000488834 NSUN5Q96P11 429 aaKnown RBP7.25□□□□□ -1.25
SSR1-209ENST00000488834 RBSNQ9H1K0 784 aa7.25□□□□□ -1.25
SSR1-209ENST00000488834 GHRHP01286 108 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 CPB1P15086 417 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 EIF2AK2P19525 551 aaKnown RBP7.24□□□□□ -1.25
SSR1-209ENST00000488834 NRLP54845 237 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 KANK3Q6NY19 840 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 HFE2Q6ZVN8 426 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 MICALL1Q8N3F8 863 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 SPACA7Q96KW9 195 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 GGNBP2Q9H3C7 697 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 TMEM63CQ9P1W3 806 aa7.24□□□□□ -1.25
SSR1-209ENST00000488834 MAPK1P28482 360 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 GPLD1P80108 840 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 ELMSAN1Q6PJG2 1045 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 GJD3Q8N144 294 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 OR13H1Q8NG92 308 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 TRPM4Q8TD43 1214 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 SCARF2Q96GP6 870 aaPredicted RBP7.23□□□□□ -1.25
SSR1-209ENST00000488834 MDFIQ99750 246 aa7.23□□□□□ -1.25
SSR1-209ENST00000488834 M0R082 166 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 PIK3R2O00459 728 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 PHACTR2O75167 634 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 CES1P23141 567 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 SOX18P35713 384 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 HYAL2Q12891 473 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 PSAPL1Q6NUJ1 521 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 NCAPG2Q86XI2 1143 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 BEND7Q8N7W2 519 aaPredicted RBP7.22□□□□□ -1.25
SSR1-209ENST00000488834 ZNF417Q8TAU3 575 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 NUDT8Q8WV74 236 aa7.22□□□□□ -1.25
SSR1-209ENST00000488834 ZNF587Q96SQ5 575 aaPredicted RBP7.22□□□□□ -1.25
SSR1-209ENST00000488834 SUV39H2Q9H5I1 410 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms