RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 SRGNP10124 158 aa14.06□□□□□ -0.16
NUP98-212ENST00000488828 HCLS1P14317 486 aaPredicted RBP14.06□□□□□ -0.16
NUP98-212ENST00000488828 NPR1P16066 1061 aa14.06□□□□□ -0.16
NUP98-212ENST00000488828 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
NUP98-212ENST00000488828 PDAP1Q13442 181 aaKnown RBP14.06□□□□□ -0.16
NUP98-212ENST00000488828 STYK1Q6J9G0 422 aa14.06□□□□□ -0.16
NUP98-212ENST00000488828 FAM89AQ96GI7 184 aa14.06□□□□□ -0.16
NUP98-212ENST00000488828 ISCA1Q9BUE6 129 aa14.06□□□□□ -0.16
NUP98-212ENST00000488828 METTL22Q9BUU2 404 aaPredicted RBP14.06□□□□□ -0.16
NUP98-212ENST00000488828 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
NUP98-212ENST00000488828 PSEN1P49768 467 aa14.05□□□□□ -0.16
NUP98-212ENST00000488828 SYNE4Q8N205 404 aa14.05□□□□□ -0.16
NUP98-212ENST00000488828 CWC25Q9NXE8 425 aaPredicted RBP14.05□□□□□ -0.16
NUP98-212ENST00000488828 C21orf2O43822 256 aa14.04□□□□□ -0.16
NUP98-212ENST00000488828 ALDH1B1P30837 517 aa14.04□□□□□ -0.16
NUP98-212ENST00000488828 TRIM28Q13263 835 aaKnown RBP14.04□□□□□ -0.16
NUP98-212ENST00000488828 CCDC191Q8NCU4 936 aa14.04□□□□□ -0.16
NUP98-212ENST00000488828 JARID2Q92833 1246 aaPredicted RBP14.04□□□□□ -0.16
NUP98-212ENST00000488828 RBM17Q96I25 401 aaKnown RBP14.04□□□□□ -0.16
NUP98-212ENST00000488828 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
NUP98-212ENST00000488828 SLC10A5Q5PT55 438 aa14.03□□□□□ -0.16
NUP98-212ENST00000488828 PRPF40BQ6NWY9 871 aaKnown RBP14.03□□□□□ -0.16
NUP98-212ENST00000488828 SLC4A10Q6U841 1118 aa14.03□□□□□ -0.16
NUP98-212ENST00000488828 TRMT2AQ8IZ69 625 aaKnown RBP14.03□□□□□ -0.16
NUP98-212ENST00000488828 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
NUP98-212ENST00000488828 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
NUP98-212ENST00000488828 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
NUP98-212ENST00000488828 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
NUP98-212ENST00000488828 ABCC12Q96J65 1359 aa14.03□□□□□ -0.16
NUP98-212ENST00000488828 NRXN2Q9P2S2 1712 aa14.03□□□□□ -0.16
NUP98-212ENST00000488828 IBTKQ9P2D0 1353 aaPredicted RBP14.02□□□□□ -0.17
NUP98-212ENST00000488828 RNF123Q5XPI4 1314 aa14.02□□□□□ -0.17
NUP98-212ENST00000488828 KLRG2A4D1S0 409 aaPredicted RBP14.02□□□□□ -0.17
NUP98-212ENST00000488828 F6X3S4 739 aa14.02□□□□□ -0.17
NUP98-212ENST00000488828 IRS4O14654 1257 aaPredicted RBP14.02□□□□□ -0.17
NUP98-212ENST00000488828 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
NUP98-212ENST00000488828 CWF19L2Q2TBE0 894 aaKnown RBP14.02□□□□□ -0.17
NUP98-212ENST00000488828 SSH1Q8WYL5 1049 aa14.02□□□□□ -0.17
NUP98-212ENST00000488828 SMC4Q9NTJ3 1288 aa14.02□□□□□ -0.17
NUP98-212ENST00000488828 ADCY9O60503 1353 aa14.01□□□□□ -0.17
NUP98-212ENST00000488828 C3orf67Q6ZVT6 689 aa14.01□□□□□ -0.17
NUP98-212ENST00000488828 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
NUP98-212ENST00000488828 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
NUP98-212ENST00000488828 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
NUP98-212ENST00000488828 IGKV5-2P06315 115 aa14□□□□□ -0.17
NUP98-212ENST00000488828 CT47B1P0C2W7 299 aaPredicted RBP14□□□□□ -0.17
NUP98-212ENST00000488828 NEURL1BA8MQ27 555 aa13.99□□□□□ -0.17
NUP98-212ENST00000488828 PCCAP05165 728 aaPredicted RBP13.99□□□□□ -0.17
NUP98-212ENST00000488828 ALDH1L2Q3SY69 923 aa13.99□□□□□ -0.17
NUP98-212ENST00000488828 CRY2Q49AN0 593 aa13.99□□□□□ -0.17
NUP98-212ENST00000488828 SOGA3Q5TF21 947 aa13.99□□□□□ -0.17
NUP98-212ENST00000488828 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
NUP98-212ENST00000488828 ANKRD31Q8N7Z5 1873 aa13.98□□□□□ -0.17
NUP98-212ENST00000488828 GOLGB1Q14789 3259 aaKnown RBP13.98□□□□□ -0.17
NUP98-212ENST00000488828 HOXA10P31260 410 aaPredicted RBP13.98□□□□□ -0.17
NUP98-212ENST00000488828 GCKRQ14397 625 aa13.98□□□□□ -0.17
NUP98-212ENST00000488828 UBE3BQ7Z3V4 1068 aa13.98□□□□□ -0.17
NUP98-212ENST00000488828 CCDC85AQ96PX6 553 aaPredicted RBP13.98□□□□□ -0.17
NUP98-212ENST00000488828 CRAMP1Q96RY5 1269 aa13.98□□□□□ -0.17
NUP98-212ENST00000488828 KIAA1551Q9HCM1 1747 aa13.98□□□□□ -0.17
NUP98-212ENST00000488828 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
NUP98-212ENST00000488828 STK25O00506 426 aa13.97□□□□□ -0.17
NUP98-212ENST00000488828 PPEF1O14829 653 aaPredicted RBP13.97□□□□□ -0.17
NUP98-212ENST00000488828 RASSF7Q02833 373 aa13.97□□□□□ -0.17
NUP98-212ENST00000488828 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
NUP98-212ENST00000488828 SRCIN1Q9C0H9 1055 aa13.97□□□□□ -0.17
NUP98-212ENST00000488828 C9orf78Q9NZ63 289 aaPredicted RBP13.97□□□□□ -0.17
NUP98-212ENST00000488828 RNF181Q9P0P0 153 aa13.97□□□□□ -0.17
NUP98-212ENST00000488828 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.17
NUP98-212ENST00000488828 PDE8AO60658 829 aa13.96□□□□□ -0.17
NUP98-212ENST00000488828 BBOX1O75936 387 aa13.96□□□□□ -0.17
NUP98-212ENST00000488828 CCDC93Q567U6 631 aa13.96□□□□□ -0.17
NUP98-212ENST00000488828 OLFM4Q6UX06 510 aa13.96□□□□□ -0.17
NUP98-212ENST00000488828 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
NUP98-212ENST00000488828 ZNF526Q8TF50 670 aaPredicted RBP13.96□□□□□ -0.17
NUP98-212ENST00000488828 NOB1Q9ULX3 412 aaKnown RBP13.96□□□□□ -0.17
NUP98-212ENST00000488828 PTPRCP08575 1304 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.95□□□□□ -0.18
NUP98-212ENST00000488828 H7C1W4 665 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 LMNB1P20700 586 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 RARSP54136 660 aaKnown RBP13.95□□□□□ -0.18
NUP98-212ENST00000488828 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
NUP98-212ENST00000488828 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 BEND3Q5T5X7 828 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
NUP98-212ENST00000488828 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
NUP98-212ENST00000488828 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
NUP98-212ENST00000488828 TAOK3Q9H2K8 898 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 ANKRD36CQ5JPF3 1778 aa13.95□□□□□ -0.18
NUP98-212ENST00000488828 ABCC4O15439 1325 aa13.94□□□□□ -0.18
NUP98-212ENST00000488828 GRAPQ13588 217 aa13.94□□□□□ -0.18
NUP98-212ENST00000488828 RIC1Q4ADV7 1423 aa13.94□□□□□ -0.18
NUP98-212ENST00000488828 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
NUP98-212ENST00000488828 GRAPLQ8TC17 118 aaPredicted RBP13.94□□□□□ -0.18
NUP98-212ENST00000488828 C7orf43Q8WVR3 580 aa13.94□□□□□ -0.18
NUP98-212ENST00000488828 CDHR2Q9BYE9 1310 aa13.93□□□□□ -0.18
NUP98-212ENST00000488828 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
NUP98-212ENST00000488828 NFKBIEO00221 500 aa13.93□□□□□ -0.18
NUP98-212ENST00000488828 IPO8O15397 1037 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms