RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 CDCA7LQ96GN5 454 aa17.58■□□□□ 0.4
SH2D3C-212ENST00000488685 TMX4Q9H1E5 349 aaPredicted RBP17.58■□□□□ 0.4
SH2D3C-212ENST00000488685 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
SH2D3C-212ENST00000488685 CDHR2Q9BYE9 1310 aa17.57■□□□□ 0.4
SH2D3C-212ENST00000488685 PDE8AO60658 829 aa17.57■□□□□ 0.4
SH2D3C-212ENST00000488685 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
SH2D3C-212ENST00000488685 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
SH2D3C-212ENST00000488685 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
SH2D3C-212ENST00000488685 H7C1W4 665 aa17.56■□□□□ 0.4
SH2D3C-212ENST00000488685 LINS1Q8NG48 757 aa17.56■□□□□ 0.4
SH2D3C-212ENST00000488685 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
SH2D3C-212ENST00000488685 TAF1P21675 1872 aa17.56■□□□□ 0.4
SH2D3C-212ENST00000488685 GCKRQ14397 625 aa17.55■□□□□ 0.4
SH2D3C-212ENST00000488685 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
SH2D3C-212ENST00000488685 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
SH2D3C-212ENST00000488685 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
SH2D3C-212ENST00000488685 VPS33BQ9H267 617 aa17.55■□□□□ 0.4
SH2D3C-212ENST00000488685 TOMM70O94826 608 aa17.54■□□□□ 0.4
SH2D3C-212ENST00000488685 F6X3S4 739 aa17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 FZD9O00144 591 aa17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 MPNDQ8N594 471 aa17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
SH2D3C-212ENST00000488685 POTECB2RU33 542 aa17.52■□□□□ 0.4
SH2D3C-212ENST00000488685 CASP7P55210 303 aa17.52■□□□□ 0.4
SH2D3C-212ENST00000488685 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
SH2D3C-212ENST00000488685 JDP2Q8WYK2 163 aa17.52■□□□□ 0.4
SH2D3C-212ENST00000488685 DDNO94850 711 aaPredicted RBP17.51■□□□□ 0.39
SH2D3C-212ENST00000488685 UBE3BQ7Z3V4 1068 aa17.51■□□□□ 0.39
SH2D3C-212ENST00000488685 TTLL11Q8NHH1 800 aa17.51■□□□□ 0.39
SH2D3C-212ENST00000488685 WDR90Q96KV7 1748 aa17.51■□□□□ 0.39
SH2D3C-212ENST00000488685 PLA2G12BQ9BX93 195 aa17.51■□□□□ 0.39
SH2D3C-212ENST00000488685 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
SH2D3C-212ENST00000488685 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 CT47B1P0C2W7 299 aaPredicted RBP17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 CTSWP56202 376 aa17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 COL4A1P02462 1669 aa17.5■□□□□ 0.39
SH2D3C-212ENST00000488685 RBM46Q8TBY0 533 aaKnown RBP17.49■□□□□ 0.39
SH2D3C-212ENST00000488685 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
SH2D3C-212ENST00000488685 COL4A5P29400 1685 aa17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 PTPRCP08575 1304 aa17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 RTL9Q8NET4 1388 aa17.48■□□□□ 0.39
SH2D3C-212ENST00000488685 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 MYH3P11055 1940 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 CSF1RP07333 972 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 EIF6P56537 245 aaKnown RBP17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 GPSM2P81274 684 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 KIAA2012Q0VF49 1180 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 AOC3Q16853 763 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 NIM1KQ8IY84 436 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 GPC2Q8N158 579 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 GREM2Q9H772 168 aa17.47■□□□□ 0.39
SH2D3C-212ENST00000488685 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
SH2D3C-212ENST00000488685 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
SH2D3C-212ENST00000488685 CDC5LQ99459 802 aaKnown RBP17.46■□□□□ 0.39
SH2D3C-212ENST00000488685 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
SH2D3C-212ENST00000488685 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
SH2D3C-212ENST00000488685 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
SH2D3C-212ENST00000488685 IQCA1LA6NCM1 817 aa17.45■□□□□ 0.38
SH2D3C-212ENST00000488685 GRM8O00222 908 aa17.45■□□□□ 0.38
SH2D3C-212ENST00000488685 FSTL1Q12841 308 aa17.45■□□□□ 0.38
SH2D3C-212ENST00000488685 POLLQ9UGP5 575 aa17.45■□□□□ 0.38
SH2D3C-212ENST00000488685 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
SH2D3C-212ENST00000488685 SCN4AP35499 1836 aa17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 FOXO4P98177 505 aa17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 HNRNPUQ00839 825 aaKnown RBP eCLIP17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 TBC1D16Q8TBP0 767 aa17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 BSDC1Q9NW68 430 aaPredicted RBP17.44■□□□□ 0.38
SH2D3C-212ENST00000488685 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
SH2D3C-212ENST00000488685 HSPA6P17066 643 aa17.43■□□□□ 0.38
SH2D3C-212ENST00000488685 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
SH2D3C-212ENST00000488685 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
SH2D3C-212ENST00000488685 C9orf78Q9NZ63 289 aaPredicted RBP17.43■□□□□ 0.38
SH2D3C-212ENST00000488685 ITGA6P23229 1130 aa17.42■□□□□ 0.38
SH2D3C-212ENST00000488685 CXCL9Q07325 125 aa17.42■□□□□ 0.38
SH2D3C-212ENST00000488685 EYA3Q99504 573 aa17.42■□□□□ 0.38
SH2D3C-212ENST00000488685 ANKIB1Q9P2G1 1089 aa17.42■□□□□ 0.38
SH2D3C-212ENST00000488685 UTYO14607 1347 aa17.42■□□□□ 0.38
SH2D3C-212ENST00000488685 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
SH2D3C-212ENST00000488685 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
SH2D3C-212ENST00000488685 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
SH2D3C-212ENST00000488685 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
SH2D3C-212ENST00000488685 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
SH2D3C-212ENST00000488685 GJA3Q9Y6H8 435 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms