RNA–Protein interactions for RNA: ENST00000488671.1

AC112229.4-201, humanhuman

TSL 2 BASIC

Gene AC112229.4, Length 1,528 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC112229.4-201ENST00000488671 SF3B3Q15393 1217 aaKnown RBP28.74■■■□□ 2.19
AC112229.4-201ENST00000488671 DDX46Q7L014 1031 aaKnown RBP28.74■■■□□ 2.19
AC112229.4-201ENST00000488671 SLC51AQ86UW1 340 aa28.74■■■□□ 2.19
AC112229.4-201ENST00000488671 ALDH1B1P30837 517 aa28.74■■■□□ 2.19
AC112229.4-201ENST00000488671 CTSWP56202 376 aa28.74■■■□□ 2.19
AC112229.4-201ENST00000488671 OLFM4Q6UX06 510 aa28.73■■■□□ 2.19
AC112229.4-201ENST00000488671 USP44Q9H0E7 712 aa28.73■■■□□ 2.19
AC112229.4-201ENST00000488671 COL4A1P02462 1669 aa28.72■■■□□ 2.19
AC112229.4-201ENST00000488671 FTSJ3Q8IY81 847 aaKnown RBP28.72■■■□□ 2.19
AC112229.4-201ENST00000488671 TMEM57Q8N5G2 664 aa28.72■■■□□ 2.19
AC112229.4-201ENST00000488671 CRAMP1Q96RY5 1269 aa28.72■■■□□ 2.19
AC112229.4-201ENST00000488671 SEC31BQ9NQW1 1179 aa28.72■■■□□ 2.19
AC112229.4-201ENST00000488671 RLBP1P12271 317 aa28.71■■■□□ 2.19
AC112229.4-201ENST00000488671 EPHA10Q5JZY3 1008 aa28.71■■■□□ 2.19
AC112229.4-201ENST00000488671 INTS3Q68E01 1043 aaKnown RBP28.71■■■□□ 2.19
AC112229.4-201ENST00000488671 ARHGAP27Q6ZUM4 889 aa28.71■■■□□ 2.19
AC112229.4-201ENST00000488671 DZIP1LQ8IYY4 767 aaKnown RBP28.71■■■□□ 2.19
AC112229.4-201ENST00000488671 SUCLG2Q96I99 432 aa28.71■■■□□ 2.19
AC112229.4-201ENST00000488671 GRIN3BO60391 1043 aa28.7■■■□□ 2.19
AC112229.4-201ENST00000488671 CCDC152Q4G0S7 254 aa28.7■■■□□ 2.19
AC112229.4-201ENST00000488671 TTLL11Q8NHH1 800 aa28.7■■■□□ 2.19
AC112229.4-201ENST00000488671 PANK1Q8TE04 598 aa28.69■■■□□ 2.18
AC112229.4-201ENST00000488671 PLA2G12BQ9BX93 195 aa28.69■■■□□ 2.18
AC112229.4-201ENST00000488671 FOXO4P98177 505 aa28.69■■■□□ 2.18
AC112229.4-201ENST00000488671 CELF1Q92879 486 aaKnown RBP28.69■■■□□ 2.18
AC112229.4-201ENST00000488671 GREM2Q9H772 168 aa28.69■■■□□ 2.18
AC112229.4-201ENST00000488671 CHMP3Q9Y3E7 222 aa28.69■■■□□ 2.18
AC112229.4-201ENST00000488671 UTYO14607 1347 aa28.68■■■□□ 2.18
AC112229.4-201ENST00000488671 PPEF1O14829 653 aaPredicted RBP28.68■■■□□ 2.18
AC112229.4-201ENST00000488671 GRAPQ13588 217 aa28.68■■■□□ 2.18
AC112229.4-201ENST00000488671 GRAPLQ8TC17 118 aaPredicted RBP28.68■■■□□ 2.18
AC112229.4-201ENST00000488671 MEIS3Q99687 375 aa28.68■■■□□ 2.18
AC112229.4-201ENST00000488671 KAZALD1Q96I82 304 aa28.67■■■□□ 2.18
AC112229.4-201ENST00000488671 SPEF2Q9C093 1822 aa28.67■■■□□ 2.18
AC112229.4-201ENST00000488671 FAM161AQ3B820 660 aa28.66■■■□□ 2.18
AC112229.4-201ENST00000488671 LMBR1LQ6UX01 489 aa28.66■■■□□ 2.18
AC112229.4-201ENST00000488671 ITPRIPQ8IWB1 547 aa28.65■■■□□ 2.18
AC112229.4-201ENST00000488671 C7orf43Q8WVR3 580 aa28.65■■■□□ 2.18
AC112229.4-201ENST00000488671 UBTFL1P0CB47 393 aaPredicted RBP28.64■■■□□ 2.18
AC112229.4-201ENST00000488671 BICC1Q9H694 974 aaKnown RBP28.64■■■□□ 2.18
AC112229.4-201ENST00000488671 CSF1RP07333 972 aa28.64■■■□□ 2.17
AC112229.4-201ENST00000488671 RASSF7Q02833 373 aa28.64■■■□□ 2.17
AC112229.4-201ENST00000488671 FER1L6Q2WGJ9 1857 aa28.62■■■□□ 2.17
AC112229.4-201ENST00000488671 BBOX1O75936 387 aa28.62■■■□□ 2.17
AC112229.4-201ENST00000488671 ITGA6P23229 1130 aa28.62■■■□□ 2.17
AC112229.4-201ENST00000488671 RPS8P62241 208 aaKnown RBP28.62■■■□□ 2.17
AC112229.4-201ENST00000488671 C20orf194Q5TEA3 1177 aa28.62■■■□□ 2.17
AC112229.4-201ENST00000488671 CCDC88AQ3V6T2 1871 aa28.61■■■□□ 2.17
AC112229.4-201ENST00000488671 CHD4Q14839 1912 aa28.61■■■□□ 2.17
AC112229.4-201ENST00000488671 CCDC93Q567U6 631 aa28.6■■■□□ 2.17
AC112229.4-201ENST00000488671 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.6■■■□□ 2.17
AC112229.4-201ENST00000488671 LRRFIP2Q9Y608 721 aaKnown RBP28.6■■■□□ 2.17
AC112229.4-201ENST00000488671 NFKBIEO00221 500 aa28.59■■■□□ 2.17
AC112229.4-201ENST00000488671 ANKRD18AQ8IVF6 992 aa28.59■■■□□ 2.17
AC112229.4-201ENST00000488671 ANKRD44Q8N8A2 993 aa28.59■■■□□ 2.17
AC112229.4-201ENST00000488671 ATP6V0A2Q9Y487 856 aa28.59■■■□□ 2.17
AC112229.4-201ENST00000488671 CDC5LQ99459 802 aaKnown RBP28.59■■■□□ 2.17
AC112229.4-201ENST00000488671 COG6Q9Y2V7 657 aa28.59■■■□□ 2.17
AC112229.4-201ENST00000488671 SOGA3Q5TF21 947 aa28.58■■■□□ 2.17
AC112229.4-201ENST00000488671 RTL9Q8NET4 1388 aa28.58■■■□□ 2.17
AC112229.4-201ENST00000488671 SBF1O95248 1867 aa28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 ANKRD18BA2A2Z9 1011 aa28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 GNAI3P08754 354 aa28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 MS4A1P11836 297 aa28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 IFIT5Q13325 482 aaKnown RBP28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 SP8Q8IXZ3 490 aa28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 ZNF594Q96JF6 807 aaPredicted RBP28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 TMX4Q9H1E5 349 aaPredicted RBP28.57■■■□□ 2.16
AC112229.4-201ENST00000488671 CCDC57Q2TAC2 916 aa28.55■■■□□ 2.16
AC112229.4-201ENST00000488671 PRELPP51888 382 aa28.54■■■□□ 2.16
AC112229.4-201ENST00000488671 RRP1P56182 461 aaKnown RBP28.54■■■□□ 2.16
AC112229.4-201ENST00000488671 RABL6Q3YEC7 729 aaPredicted RBP28.54■■■□□ 2.16
AC112229.4-201ENST00000488671 TAOK3Q9H2K8 898 aa28.54■■■□□ 2.16
AC112229.4-201ENST00000488671 IGHMBP2P38935 993 aaKnown RBP28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 TAF7LQ5H9L4 462 aa28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 RTKN2Q8IZC4 609 aa28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 C1orf115Q9H7X2 142 aa28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 LRRC37AA6NMS7 1700 aa28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 CC2D2BQ6DHV5 1058 aa28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 TMC4Q7Z404 712 aa28.53■■■□□ 2.16
AC112229.4-201ENST00000488671 SNED1Q8TER0 1413 aa28.52■■■□□ 2.16
AC112229.4-201ENST00000488671 ZBTB7BO15156 539 aaPredicted RBP28.52■■■□□ 2.16
AC112229.4-201ENST00000488671 FKBP4Q02790 459 aaKnown RBP eCLIP28.52■■■□□ 2.16
AC112229.4-201ENST00000488671 MVPQ14764 893 aaKnown RBP28.52■■■□□ 2.16
AC112229.4-201ENST00000488671 MPHOSPH8Q99549 860 aa28.52■■■□□ 2.16
AC112229.4-201ENST00000488671 ZNF277Q9NRM2 450 aaPredicted RBP28.52■■■□□ 2.16
AC112229.4-201ENST00000488671 GNAI2P04899 355 aa28.51■■■□□ 2.15
AC112229.4-201ENST00000488671 GPSM2P81274 684 aa28.51■■■□□ 2.15
AC112229.4-201ENST00000488671 MPNDQ8N594 471 aa28.51■■■□□ 2.15
AC112229.4-201ENST00000488671 KLHDC4Q8TBB5 520 aa28.51■■■□□ 2.15
AC112229.4-201ENST00000488671 NSFL1CQ9UNZ2 370 aaKnown RBP28.51■■■□□ 2.15
AC112229.4-201ENST00000488671 PDE3AQ14432 1141 aa28.5■■■□□ 2.15
AC112229.4-201ENST00000488671 C9orf131Q5VYM1 1079 aa28.5■■■□□ 2.15
AC112229.4-201ENST00000488671 DPP8Q6V1X1 898 aaPredicted RBP28.5■■■□□ 2.15
AC112229.4-201ENST00000488671 BSDC1Q9NW68 430 aaPredicted RBP28.5■■■□□ 2.15
AC112229.4-201ENST00000488671 RNF181Q9P0P0 153 aa28.5■■■□□ 2.15
AC112229.4-201ENST00000488671 HDAC5Q9UQL6 1122 aa28.5■■■□□ 2.15
AC112229.4-201ENST00000488671 LMNB1P20700 586 aa28.48■■■□□ 2.15
AC112229.4-201ENST00000488671 ANKIB1Q9P2G1 1089 aa28.48■■■□□ 2.15
AC112229.4-201ENST00000488671 MINPP1Q9UNW1 487 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms