RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 CRY2Q49AN0 593 aa12.46□□□□□ -0.41
PDPN-206ENST00000488631 CCDC152Q4G0S7 254 aa12.46□□□□□ -0.41
PDPN-206ENST00000488631 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
PDPN-206ENST00000488631 MRPL50Q8N5N7 158 aaKnown RBP12.46□□□□□ -0.41
PDPN-206ENST00000488631 LINS1Q8NG48 757 aa12.46□□□□□ -0.41
PDPN-206ENST00000488631 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
PDPN-206ENST00000488631 CHD4Q14839 1912 aa12.45□□□□□ -0.42
PDPN-206ENST00000488631 PDE8AO60658 829 aa12.45□□□□□ -0.42
PDPN-206ENST00000488631 BBOX1O75936 387 aa12.45□□□□□ -0.42
PDPN-206ENST00000488631 IGKV5-2P06315 115 aa12.45□□□□□ -0.42
PDPN-206ENST00000488631 CT47B1P0C2W7 299 aaPredicted RBP12.45□□□□□ -0.42
PDPN-206ENST00000488631 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
PDPN-206ENST00000488631 ALDH1L2Q3SY69 923 aa12.45□□□□□ -0.42
PDPN-206ENST00000488631 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
PDPN-206ENST00000488631 SRCIN1Q9C0H9 1055 aa12.45□□□□□ -0.42
PDPN-206ENST00000488631 ABCC4O15439 1325 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 GRAPQ13588 217 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 GCKRQ14397 625 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 CC2D2BQ6DHV5 1058 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
PDPN-206ENST00000488631 FRAT1Q92837 279 aaPredicted RBP12.44□□□□□ -0.42
PDPN-206ENST00000488631 ZNF277Q9NRM2 450 aaPredicted RBP12.44□□□□□ -0.42
PDPN-206ENST00000488631 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 NUP98P52948 1817 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
PDPN-206ENST00000488631 PTPRCP08575 1304 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 G3V3G9 751 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 NFKBIEO00221 500 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 DPP8Q6V1X1 898 aaPredicted RBP12.43□□□□□ -0.42
PDPN-206ENST00000488631 JDP2Q8WYK2 163 aa12.43□□□□□ -0.42
PDPN-206ENST00000488631 NOB1Q9ULX3 412 aaKnown RBP12.43□□□□□ -0.42
PDPN-206ENST00000488631 CTSWP56202 376 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 FKBP4Q02790 459 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDPN-206ENST00000488631 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
PDPN-206ENST00000488631 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 BEND3Q5T5X7 828 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
PDPN-206ENST00000488631 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
PDPN-206ENST00000488631 MPNDQ8N594 471 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
PDPN-206ENST00000488631 ANKIB1Q9P2G1 1089 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
PDPN-206ENST00000488631 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
PDPN-206ENST00000488631 ZBED9Q6R2W3 1325 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
PDPN-206ENST00000488631 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
PDPN-206ENST00000488631 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 SUPT20HQ8NEM7 779 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
PDPN-206ENST00000488631 API5Q9BZZ5 524 aaKnown RBP12.41□□□□□ -0.42
PDPN-206ENST00000488631 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
PDPN-206ENST00000488631 UTRNP46939 3433 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 H7C1W4 665 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 GRM8O00222 908 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 ALDH1L1O75891 902 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 IGHMBP2P38935 993 aaKnown RBP12.4□□□□□ -0.42
PDPN-206ENST00000488631 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
PDPN-206ENST00000488631 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
PDPN-206ENST00000488631 C1QTNF8P60827 252 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 EVX2Q03828 476 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 C7orf43Q8WVR3 580 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
PDPN-206ENST00000488631 KIAA1551Q9HCM1 1747 aa12.4□□□□□ -0.43
PDPN-206ENST00000488631 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
PDPN-206ENST00000488631 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
PDPN-206ENST00000488631 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
PDPN-206ENST00000488631 NIM1KQ8IY84 436 aa12.39□□□□□ -0.43
PDPN-206ENST00000488631 GREM2Q9H772 168 aa12.39□□□□□ -0.43
PDPN-206ENST00000488631 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
PDPN-206ENST00000488631 COL11A2P13942 1736 aaPredicted RBP12.38□□□□□ -0.43
PDPN-206ENST00000488631 ANKRD18BA2A2Z9 1011 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 KCNJ4P48050 445 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
PDPN-206ENST00000488631 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
PDPN-206ENST00000488631 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 RRAGCQ9HB90 399 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 GJA3Q9Y6H8 435 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 TNRC6CQ9HCJ0 1690 aaKnown RBP12.38□□□□□ -0.43
PDPN-206ENST00000488631 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
PDPN-206ENST00000488631 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 BCAR3O75815 825 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 ITGA6P23229 1130 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 AOC3Q16853 763 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 SLC51AQ86UW1 340 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms