RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PHF20L1A8MW92 1017 aa9.08□□□□□ -0.96
VPS8-224ENST00000488255 EIF1AXP47813 144 aaKnown RBP9.08□□□□□ -0.96
VPS8-224ENST00000488255 SERPINB4P48594 390 aa9.08□□□□□ -0.96
VPS8-224ENST00000488255 EDEM1Q92611 657 aa9.08□□□□□ -0.96
VPS8-224ENST00000488255 NUDT16Q96DE0 195 aaKnown RBP9.08□□□□□ -0.96
VPS8-224ENST00000488255 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
VPS8-224ENST00000488255 ARID4AP29374 1257 aaPredicted RBP9.07□□□□□ -0.96
VPS8-224ENST00000488255 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
VPS8-224ENST00000488255 HFE2Q6ZVN8 426 aa9.07□□□□□ -0.96
VPS8-224ENST00000488255 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
VPS8-224ENST00000488255 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
VPS8-224ENST00000488255 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
VPS8-224ENST00000488255 M0R082 166 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 ALBP02768 609 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 CPB1P15086 417 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 HOXB4P17483 251 aaPredicted RBP9.06□□□□□ -0.96
VPS8-224ENST00000488255 DGKGP49619 791 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 FKBP4Q02790 459 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS8-224ENST00000488255 RASSF7Q02833 373 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 ZNF417Q8TAU3 575 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
VPS8-224ENST00000488255 MDFIQ99750 246 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 STARD13Q9Y3M8 1113 aa9.06□□□□□ -0.96
VPS8-224ENST00000488255 MMP20O60882 483 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 EGFRP00533 1210 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 FAM35AQ86V20 835 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 NLRP13Q86W25 1043 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 TTC16Q8NEE8 873 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 SUV39H2Q9H5I1 410 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 C11orf16Q9NQ32 467 aa9.05□□□□□ -0.96
VPS8-224ENST00000488255 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
VPS8-224ENST00000488255 A6NHS1 94 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 ZBTB42B2RXF5 422 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 H3BRB1 525 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 FAM13AO94988 1023 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 MAP3K6O95382 1288 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 PSAPP07602 524 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 SF3B2Q13435 895 aaKnown RBP9.04□□□□□ -0.96
VPS8-224ENST00000488255 LINC00114Q6XXX2 140 aa9.04□□□□□ -0.96
VPS8-224ENST00000488255 NSUN5Q96P11 429 aaKnown RBP9.04□□□□□ -0.96
VPS8-224ENST00000488255 TUT1Q9H6E5 874 aaKnown RBP9.04□□□□□ -0.96
VPS8-224ENST00000488255 GDF11O95390 407 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 PCSK2P16519 638 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 PSAPL1Q6NUJ1 521 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 MICALL1Q8N3F8 863 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 JPH1Q9HDC5 661 aaPredicted RBP9.03□□□□□ -0.96
VPS8-224ENST00000488255 TLR7Q9NYK1 1049 aaKnown RBP9.03□□□□□ -0.96
VPS8-224ENST00000488255 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 POLIQ9UNA4 740 aa9.03□□□□□ -0.96
VPS8-224ENST00000488255 J3QW42 95 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 GNB5O14775 395 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 PDGFAP04085 211 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 GSK3AP49840 483 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 TTC39BQ5VTQ0 682 aaPredicted RBP9.02□□□□□ -0.97
VPS8-224ENST00000488255 KANK3Q6NY19 840 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 GLYCTKQ8IVS8 523 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 TMEM151AQ8N4L1 468 aa9.02□□□□□ -0.97
VPS8-224ENST00000488255 RGS9O75916 674 aaPredicted RBP9.01□□□□□ -0.97
VPS8-224ENST00000488255 EIF2AK2P19525 551 aaKnown RBP9.01□□□□□ -0.97
VPS8-224ENST00000488255 PLAURQ03405 335 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 ELMSAN1Q6PJG2 1045 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 ZNF438Q7Z4V0 828 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 TRPM4Q8TD43 1214 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 PLVAPQ9BX97 442 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 CCDC87Q9NVE4 849 aa9.01□□□□□ -0.97
VPS8-224ENST00000488255 ICMTO60725 284 aa9□□□□□ -0.97
VPS8-224ENST00000488255 LILRB5O75023 590 aa9□□□□□ -0.97
VPS8-224ENST00000488255 MZF1P28698 734 aaPredicted RBP9□□□□□ -0.97
VPS8-224ENST00000488255 GPLD1P80108 840 aa9□□□□□ -0.97
VPS8-224ENST00000488255 PCSK7Q16549 785 aa9□□□□□ -0.97
VPS8-224ENST00000488255 CCER1Q8TC90 406 aaPredicted RBP9□□□□□ -0.97
VPS8-224ENST00000488255 TRIM11Q96F44 468 aa9□□□□□ -0.97
VPS8-224ENST00000488255 ELP3Q9H9T3 547 aa9□□□□□ -0.97
VPS8-224ENST00000488255 PIK3R2O00459 728 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 COL8A1P27658 744 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 NRLP54845 237 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 PERM1Q5SV97 790 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 C20orf204Q6ZNR8 217 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 TXNDC2Q86VQ3 553 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 ABI2Q9NYB9 513 aaPredicted RBP8.99□□□□□ -0.97
VPS8-224ENST00000488255 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
VPS8-224ENST00000488255 LOC102724428A0A0B4J2F2 783 aa8.98□□□□□ -0.97
VPS8-224ENST00000488255 FZD6O60353 706 aa8.98□□□□□ -0.97
VPS8-224ENST00000488255 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
VPS8-224ENST00000488255 NPR3P17342 541 aa8.98□□□□□ -0.97
VPS8-224ENST00000488255 SIK1P57059 783 aa8.98□□□□□ -0.97
VPS8-224ENST00000488255 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
VPS8-224ENST00000488255 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
VPS8-224ENST00000488255 SMG9Q9H0W8 520 aaKnown RBP8.98□□□□□ -0.97
VPS8-224ENST00000488255 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
VPS8-224ENST00000488255 BRD1O95696 1058 aa8.97□□□□□ -0.97
VPS8-224ENST00000488255 GHRHP01286 108 aa8.97□□□□□ -0.97
VPS8-224ENST00000488255 RPLP1P05386 114 aaKnown RBP8.97□□□□□ -0.97
VPS8-224ENST00000488255 TRAPPC3LQ5T215 181 aa8.97□□□□□ -0.97
VPS8-224ENST00000488255 LPIN3Q9BQK8 851 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms