RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
C9orf3-219ENST00000488186 ZNF219Q9P2Y4 722 aaPredicted RBP19.79■□□□□ 0.76
C9orf3-219ENST00000488186 CASP7P55210 303 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 CTSWP56202 376 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 ITPRIPQ8IWB1 547 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 TMEM57Q8N5G2 664 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 CRAMP1Q96RY5 1269 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 CHMP3Q9Y3E7 222 aa19.78■□□□□ 0.76
C9orf3-219ENST00000488186 GNAI3P08754 354 aa19.77■□□□□ 0.76
C9orf3-219ENST00000488186 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-219ENST00000488186 UBTFL1P0CB47 393 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-219ENST00000488186 PRPF40BQ6NWY9 871 aaKnown RBP19.77■□□□□ 0.76
C9orf3-219ENST00000488186 PLA2G12BQ9BX93 195 aa19.77■□□□□ 0.76
C9orf3-219ENST00000488186 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
C9orf3-219ENST00000488186 SOGA3Q5TF21 947 aa19.76■□□□□ 0.75
C9orf3-219ENST00000488186 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
C9orf3-219ENST00000488186 UTYO14607 1347 aa19.76■□□□□ 0.75
C9orf3-219ENST00000488186 C21orf2O43822 256 aa19.75■□□□□ 0.75
C9orf3-219ENST00000488186 BBOX1O75936 387 aa19.75■□□□□ 0.75
C9orf3-219ENST00000488186 TTLL11Q8NHH1 800 aa19.75■□□□□ 0.75
C9orf3-219ENST00000488186 PANK1Q8TE04 598 aa19.75■□□□□ 0.75
C9orf3-219ENST00000488186 SUCLG2Q96I99 432 aa19.75■□□□□ 0.75
C9orf3-219ENST00000488186 LAMB2P55268 1798 aa19.75■□□□□ 0.75
C9orf3-219ENST00000488186 PPEF1O14829 653 aaPredicted RBP19.74■□□□□ 0.75
C9orf3-219ENST00000488186 GRAPQ13588 217 aa19.74■□□□□ 0.75
C9orf3-219ENST00000488186 GRIPAP1Q4V328 841 aa19.74■□□□□ 0.75
C9orf3-219ENST00000488186 LMBR1LQ6UX01 489 aa19.74■□□□□ 0.75
C9orf3-219ENST00000488186 ARHGAP27Q6ZUM4 889 aa19.74■□□□□ 0.75
C9orf3-219ENST00000488186 GRAPLQ8TC17 118 aaPredicted RBP19.74■□□□□ 0.75
C9orf3-219ENST00000488186 C7orf43Q8WVR3 580 aa19.74■□□□□ 0.75
C9orf3-219ENST00000488186 CDC5LQ99459 802 aaKnown RBP19.74■□□□□ 0.75
C9orf3-219ENST00000488186 DDX60Q8IY21 1712 aaKnown RBP19.73■□□□□ 0.75
C9orf3-219ENST00000488186 SBF1O95248 1867 aa19.73■□□□□ 0.75
C9orf3-219ENST00000488186 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
C9orf3-219ENST00000488186 RLBP1P12271 317 aa19.73■□□□□ 0.75
C9orf3-219ENST00000488186 FOXO4P98177 505 aa19.73■□□□□ 0.75
C9orf3-219ENST00000488186 CC2D2BQ6DHV5 1058 aa19.73■□□□□ 0.75
C9orf3-219ENST00000488186 GREM2Q9H772 168 aa19.73■□□□□ 0.75
C9orf3-219ENST00000488186 ANKRD18BA2A2Z9 1011 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 CSF1RP07333 972 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 RPS8P62241 208 aaKnown RBP19.72■□□□□ 0.75
C9orf3-219ENST00000488186 IFIT5Q13325 482 aaKnown RBP19.72■□□□□ 0.75
C9orf3-219ENST00000488186 PDE3AQ14432 1141 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 CCDC57Q2TAC2 916 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 TAF7LQ5H9L4 462 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 ANKRD18AQ8IVF6 992 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 MEIS3Q99687 375 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 SEC31BQ9NQW1 1179 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 LTBP3Q9NS15 1303 aa19.72■□□□□ 0.75
C9orf3-219ENST00000488186 CACNA1SQ13698 1873 aa19.71■□□□□ 0.75
C9orf3-219ENST00000488186 ITGA6P23229 1130 aa19.71■□□□□ 0.75
C9orf3-219ENST00000488186 YY1P25490 414 aa19.71■□□□□ 0.75
C9orf3-219ENST00000488186 RRP1P56182 461 aaKnown RBP19.71■□□□□ 0.75
C9orf3-219ENST00000488186 TMC4Q7Z404 712 aa19.71■□□□□ 0.75
C9orf3-219ENST00000488186 CHMP4BQ9H444 224 aaKnown RBP19.71■□□□□ 0.75
C9orf3-219ENST00000488186 BICC1Q9H694 974 aaKnown RBP19.71■□□□□ 0.75
C9orf3-219ENST00000488186 GNAI2P04899 355 aa19.7■□□□□ 0.74
C9orf3-219ENST00000488186 IGHMBP2P38935 993 aaKnown RBP19.7■□□□□ 0.74
C9orf3-219ENST00000488186 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
C9orf3-219ENST00000488186 CCDC93Q567U6 631 aa19.7■□□□□ 0.74
C9orf3-219ENST00000488186 EPHA10Q5JZY3 1008 aa19.7■□□□□ 0.74
C9orf3-219ENST00000488186 CELF1Q92879 486 aaKnown RBP19.7■□□□□ 0.74
C9orf3-219ENST00000488186 COG6Q9Y2V7 657 aa19.7■□□□□ 0.74
C9orf3-219ENST00000488186 LRRFIP2Q9Y608 721 aaKnown RBP19.7■□□□□ 0.74
C9orf3-219ENST00000488186 MVPQ14764 893 aaKnown RBP19.69■□□□□ 0.74
C9orf3-219ENST00000488186 RTKN2Q8IZC4 609 aa19.69■□□□□ 0.74
C9orf3-219ENST00000488186 MPHOSPH8Q99549 860 aa19.69■□□□□ 0.74
C9orf3-219ENST00000488186 MYH3P11055 1940 aa19.68■□□□□ 0.74
C9orf3-219ENST00000488186 SP8Q8IXZ3 490 aa19.68■□□□□ 0.74
C9orf3-219ENST00000488186 KAZALD1Q96I82 304 aa19.68■□□□□ 0.74
C9orf3-219ENST00000488186 DDX19BQ9UMR2 479 aa19.68■□□□□ 0.74
C9orf3-219ENST00000488186 ATP6V0A2Q9Y487 856 aa19.68■□□□□ 0.74
C9orf3-219ENST00000488186 ZC3H4Q9UPT8 1303 aaKnown RBP19.68■□□□□ 0.74
C9orf3-219ENST00000488186 DICER1Q9UPY3 1922 aaKnown RBP19.67■□□□□ 0.74
C9orf3-219ENST00000488186 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
C9orf3-219ENST00000488186 RTL9Q8NET4 1388 aa19.67■□□□□ 0.74
C9orf3-219ENST00000488186 ZBTB7BO15156 539 aaPredicted RBP19.66■□□□□ 0.74
C9orf3-219ENST00000488186 OLFM4Q6UX06 510 aa19.66■□□□□ 0.74
C9orf3-219ENST00000488186 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
C9orf3-219ENST00000488186 CCDC88AQ3V6T2 1871 aa19.66■□□□□ 0.74
C9orf3-219ENST00000488186 SNED1Q8TER0 1413 aa19.66■□□□□ 0.74
C9orf3-219ENST00000488186 NFKBIEO00221 500 aa19.65■□□□□ 0.74
C9orf3-219ENST00000488186 LMNB1P20700 586 aa19.65■□□□□ 0.74
C9orf3-219ENST00000488186 RABL6Q3YEC7 729 aaPredicted RBP19.65■□□□□ 0.74
C9orf3-219ENST00000488186 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
C9orf3-219ENST00000488186 DPP8Q6V1X1 898 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-219ENST00000488186 MPNDQ8N594 471 aa19.64■□□□□ 0.73
C9orf3-219ENST00000488186 TAOK3Q9H2K8 898 aa19.64■□□□□ 0.73
C9orf3-219ENST00000488186 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
C9orf3-219ENST00000488186 BSDC1Q9NW68 430 aaPredicted RBP19.64■□□□□ 0.73
C9orf3-219ENST00000488186 ANKIB1Q9P2G1 1089 aa19.64■□□□□ 0.73
C9orf3-219ENST00000488186 NSFL1CQ9UNZ2 370 aaKnown RBP19.64■□□□□ 0.73
C9orf3-219ENST00000488186 LDHAL6AQ6ZMR3 332 aa19.63■□□□□ 0.73
C9orf3-219ENST00000488186 ZNF594Q96JF6 807 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-219ENST00000488186 PSMD1Q99460 953 aa19.63■□□□□ 0.73
C9orf3-219ENST00000488186 FKBP4Q02790 459 aaKnown RBP eCLIP19.62■□□□□ 0.73
C9orf3-219ENST00000488186 SUPT20HQ8NEM7 779 aa19.62■□□□□ 0.73
C9orf3-219ENST00000488186 VPS33BQ9H267 617 aa19.62■□□□□ 0.73
C9orf3-219ENST00000488186 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms