RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 KLHL34Q8N239 644 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF396Q96N95 335 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 NEK1Q96PY6 1258 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 CDCA7Q9BWT1 371 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ZSWIM6Q9HCJ5 1215 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ATG3Q9NT62 314 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 PAG1Q9NWQ8 432 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 SYCE3A1L190 88 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 EXOC5O00471 708 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 CYP27B1O15528 508 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 FIBPO43427 364 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 TPM3P06753 285 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 RPS6KB1P23443 525 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 GNL2Q13823 731 aaKnown RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 IMMTQ16891 758 aaKnown RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 UVSSAQ2YD98 709 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 EAF2Q96CJ1 260 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 IL17RAQ96F46 866 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 FBXO3Q9UK99 471 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 USP16Q9Y5T5 823 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 COL15A1P39059 1388 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 MRC1P22897 1456 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 EYA2O00167 538 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 GOLIM4O00461 696 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 RNF113AO15541 343 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CYP2E1P05181 493 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 IGKV5-2P06315 115 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 HMGN5P82970 282 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 PDIA6Q15084 440 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 METTL24Q5JXM2 366 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CPLX2Q6PUV4 134 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 HAUS7Q99871 368 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 SCAND2PQ9GZW5 306 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CFAP45Q9UL16 551 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 RGPD2P0DJD1 1756 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 SASH1O94885 1247 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 PIP4K2AP48426 406 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 PLCB2Q00722 1185 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 FKBP4Q02790 459 aaKnown RBP eCLIP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 STK3Q13188 491 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 USP48Q86UV5 1035 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 VSIG10Q8N0Z9 540 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 JARID2Q92833 1246 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 MAP4K1Q92918 833 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 SPATA32Q96LK8 384 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 FAM227BQ96M60 508 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 ESPNB1AK53 854 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 H7C1W4 665 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CPLX1O14810 134 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 UQCRFS1P1P0C7P4 283 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC192P0DO97 292 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 TPM4P67936 248 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 PTH1RQ03431 593 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 RABL6Q3YEC7 729 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 DNTTIP2Q5QJE6 756 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 SYNE3Q6ZMZ3 975 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 KBTBD3Q8NAB2 608 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 BICD2Q8TD16 824 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 ALDH8A1Q9H2A2 487 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 ZSCAN16Q9H4T2 348 aaPredicted RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 RBM27Q9P2N5 1060 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 SH3TC1Q8TE82 1336 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 TCIRG1Q13488 830 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 HS1BP3Q53T59 392 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 SASS6Q6UVJ0 657 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC73Q6ZRK6 1079 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 DDX46Q7L014 1031 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 KLHDC4Q8TBB5 520 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 DSCC1Q9BVC3 393 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 TRMT112Q9UI30 125 aaKnown RBP3.13□□□□□ -1.91
C9orf72-205ENST00000488117 CNPY2Q9Y2B0 182 aa3.13□□□□□ -1.91
C9orf72-205ENST00000488117 A0A0D9SFI3 127 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 CDKL5O76039 1030 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 APPP05067 770 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PCCAP05165 728 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SLC5A1P13866 664 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SYT1P21579 422 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 MCM5P33992 734 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PTPN12Q05209 780 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 CHAF1AQ13111 956 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TRIM29Q14134 588 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NKX1-1Q15270 411 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ZSCAN30Q86W11 494 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 DRC7Q8IY82 874 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TTC14Q96N46 770 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 DBNDD2Q9BQY9 259 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 LLPHQ9BRT6 129 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NUP62CLQ9H1M0 184 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 BTG4Q9NY30 223 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 TLR7Q9NYK1 1049 aaKnown RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF652Q9Y2D9 606 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 SOS2Q07890 1332 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 COL5A2P05997 1499 aaPredicted RBP3.12□□□□□ -1.91
C9orf72-205ENST00000488117 LAMB4A4D0S4 1761 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 PKD1L3Q7Z443 1732 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 NPHP1O15259 732 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 A1BGP04217 495 aa3.12□□□□□ -1.91
C9orf72-205ENST00000488117 IGHMBP2P38935 993 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms