RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 RASSF7Q02833 373 aa7.48□□□□□ -1.21
MACF1-221ENST00000487656 TEFQ10587 303 aa7.48□□□□□ -1.21
MACF1-221ENST00000487656 PACS2Q86VP3 889 aa7.48□□□□□ -1.21
MACF1-221ENST00000487656 CCER1Q8TC90 406 aaPredicted RBP7.48□□□□□ -1.21
MACF1-221ENST00000487656 PXYLP1Q8TE99 480 aa7.48□□□□□ -1.21
MACF1-221ENST00000487656 ZNF622Q969S3 477 aaKnown RBP eCLIP7.48□□□□□ -1.21
MACF1-221ENST00000487656 BRIP1Q9BX63 1249 aa7.48□□□□□ -1.21
MACF1-221ENST00000487656 NRXN2Q9P2S2 1712 aa7.48□□□□□ -1.21
MACF1-221ENST00000487656 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
MACF1-221ENST00000487656 ERFEQ4G0M1 354 aa7.47□□□□□ -1.21
MACF1-221ENST00000487656 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
MACF1-221ENST00000487656 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
MACF1-221ENST00000487656 ZNF790Q6PG37 636 aa7.47□□□□□ -1.21
MACF1-221ENST00000487656 TNS4Q8IZW8 715 aa7.47□□□□□ -1.21
MACF1-221ENST00000487656 SETDB2Q96T68 719 aa7.47□□□□□ -1.21
MACF1-221ENST00000487656 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
MACF1-221ENST00000487656 TBC1D2BQ9UPU7 963 aa7.47□□□□□ -1.21
MACF1-221ENST00000487656 ZNF330Q9Y3S2 320 aaPredicted RBP7.47□□□□□ -1.21
MACF1-221ENST00000487656 MRC1P22897 1456 aa7.47□□□□□ -1.21
MACF1-221ENST00000487656 TRIM6-TRIM34B2RNG4 842 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
MACF1-221ENST00000487656 C21orf2O43822 256 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 ST18O60284 1047 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 SSTR3P32745 418 aaPredicted RBP7.46□□□□□ -1.22
MACF1-221ENST00000487656 IL6STP40189 918 aaPredicted RBP7.46□□□□□ -1.22
MACF1-221ENST00000487656 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
MACF1-221ENST00000487656 SOGA3Q5TF21 947 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 TBC1D9BQ66K14 1250 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 ERICH6Q7L0X2 663 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 CNKSR1Q969H4 720 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
MACF1-221ENST00000487656 FMNL2Q96PY5 1086 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 FAM198AQ9UFP1 575 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 TSKSQ9UJT2 592 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 FER1L6Q2WGJ9 1857 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 UBR2Q8IWV8 1755 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.22
MACF1-221ENST00000487656 TIAM2Q8IVF5 1701 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 NBPF26B4DH59 902 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 NFKBIEO00221 500 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 PER1O15534 1290 aaPredicted RBP7.45□□□□□ -1.22
MACF1-221ENST00000487656 MS4A1P11836 297 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 PRELPP51888 382 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 EMP3P54852 163 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 ST5P78524 1137 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 PRR5LQ6MZQ0 368 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 NUDT18Q6ZVK8 323 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 CNBD1Q8NA66 436 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 NLRP7Q8WX94 980 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 TAOK3Q9H2K8 898 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 PNMA3Q9UL41 463 aa7.45□□□□□ -1.22
MACF1-221ENST00000487656 BTBD11A6QL63 1104 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 POTECB2RU33 542 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 ARHGAP33O14559 1287 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 A1BGP04217 495 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 STYK1Q6J9G0 422 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 CCDC24Q8N4L8 307 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 TATDN2Q93075 761 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 FAM163AQ96GL9 167 aaPredicted RBP7.44□□□□□ -1.22
MACF1-221ENST00000487656 MASTLQ96GX5 879 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 CFAP53Q96M91 514 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 CACNA1SQ13698 1873 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 ANKRD31Q8N7Z5 1873 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 KIF7Q2M1P5 1343 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 LTBP3Q9NS15 1303 aa7.44□□□□□ -1.22
MACF1-221ENST00000487656 SLX4Q8IY92 1834 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 RCCD1A6NED2 376 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 HSPA1AP0DMV8 641 aaKnown RBP7.43□□□□□ -1.22
MACF1-221ENST00000487656 HSPA1BP0DMV9 641 aaKnown RBP7.43□□□□□ -1.22
MACF1-221ENST00000487656 SRGNP10124 158 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 CNGB1Q14028 1251 aaPredicted RBP7.43□□□□□ -1.22
MACF1-221ENST00000487656 PROX2Q3B8N5 592 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 NBPF5PQ86XG9 351 aaPredicted RBP7.43□□□□□ -1.22
MACF1-221ENST00000487656 DZIP3Q86Y13 1208 aaKnown RBP7.43□□□□□ -1.22
MACF1-221ENST00000487656 RTF1Q92541 710 aaKnown RBP7.43□□□□□ -1.22
MACF1-221ENST00000487656 NUDCQ9Y266 331 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 ZNF652Q9Y2D9 606 aa7.43□□□□□ -1.22
MACF1-221ENST00000487656 SIPA1L3O60292 1781 aaPredicted RBP7.42□□□□□ -1.22
MACF1-221ENST00000487656 FAM205CA6NFA0 338 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 DDNO94850 711 aaPredicted RBP7.42□□□□□ -1.22
MACF1-221ENST00000487656 CAMTA2O94983 1202 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 SNRPA1P09661 255 aaKnown RBP7.42□□□□□ -1.22
MACF1-221ENST00000487656 ALDH1B1P30837 517 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 PSEN2P49810 448 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
MACF1-221ENST00000487656 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 BEGAINQ9BUH8 593 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 FAM217BQ9NTX9 383 aaPredicted RBP7.42□□□□□ -1.22
MACF1-221ENST00000487656 USP16Q9Y5T5 823 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 SCN4AP35499 1836 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 NPC1L1Q9UHC9 1359 aa7.42□□□□□ -1.22
MACF1-221ENST00000487656 SCN7AQ01118 1682 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms