RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 FOXO4P98177 505 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 TTLL11Q8NHH1 800 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
COL4A6-207ENST00000487645 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
COL4A6-207ENST00000487645 TAF1P21675 1872 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 CCDC152Q4G0S7 254 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
COL4A6-207ENST00000487645 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 MEIS3Q99687 375 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
COL4A6-207ENST00000487645 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
COL4A6-207ENST00000487645 ZNF622Q969S3 477 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL4A6-207ENST00000487645 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
COL4A6-207ENST00000487645 RTL9Q8NET4 1388 aa16.7■□□□□ 0.26
COL4A6-207ENST00000487645 GNAI2P04899 355 aa16.7■□□□□ 0.26
COL4A6-207ENST00000487645 RABL6Q3YEC7 729 aaPredicted RBP16.7■□□□□ 0.26
COL4A6-207ENST00000487645 TTLL6Q8N841 843 aa16.7■□□□□ 0.26
COL4A6-207ENST00000487645 SLX4Q8IY92 1834 aa16.7■□□□□ 0.26
COL4A6-207ENST00000487645 ARFGEF1Q9Y6D6 1849 aa16.69■□□□□ 0.26
COL4A6-207ENST00000487645 BBOX1O75936 387 aa16.69■□□□□ 0.26
COL4A6-207ENST00000487645 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
COL4A6-207ENST00000487645 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
COL4A6-207ENST00000487645 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
COL4A6-207ENST00000487645 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
COL4A6-207ENST00000487645 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
COL4A6-207ENST00000487645 LRRFIP2Q9Y608 721 aaKnown RBP16.68■□□□□ 0.26
COL4A6-207ENST00000487645 GRAPQ13588 217 aa16.67■□□□□ 0.26
COL4A6-207ENST00000487645 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
COL4A6-207ENST00000487645 GRAPLQ8TC17 118 aaPredicted RBP16.67■□□□□ 0.26
COL4A6-207ENST00000487645 GREM2Q9H772 168 aa16.67■□□□□ 0.26
COL4A6-207ENST00000487645 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
COL4A6-207ENST00000487645 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
COL4A6-207ENST00000487645 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
COL4A6-207ENST00000487645 TMC4Q7Z404 712 aa16.66■□□□□ 0.26
COL4A6-207ENST00000487645 CDC5LQ99459 802 aaKnown RBP16.66■□□□□ 0.26
COL4A6-207ENST00000487645 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
COL4A6-207ENST00000487645 ITGA6P23229 1130 aa16.65■□□□□ 0.26
COL4A6-207ENST00000487645 MTX1Q13505 466 aa16.65■□□□□ 0.26
COL4A6-207ENST00000487645 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
COL4A6-207ENST00000487645 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
COL4A6-207ENST00000487645 SEC31BQ9NQW1 1179 aa16.65■□□□□ 0.26
COL4A6-207ENST00000487645 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
COL4A6-207ENST00000487645 AAMPQ13685 434 aa16.64■□□□□ 0.25
COL4A6-207ENST00000487645 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
COL4A6-207ENST00000487645 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
COL4A6-207ENST00000487645 C7orf43Q8WVR3 580 aa16.64■□□□□ 0.25
COL4A6-207ENST00000487645 GOLGB1Q14789 3259 aaKnown RBP16.63■□□□□ 0.25
COL4A6-207ENST00000487645 ATP8B2P98198 1209 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 CC2D2BQ6DHV5 1058 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 SP8Q8IXZ3 490 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
COL4A6-207ENST00000487645 CRBNQ96SW2 442 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
COL4A6-207ENST00000487645 PPEF1O14829 653 aaPredicted RBP16.62■□□□□ 0.25
COL4A6-207ENST00000487645 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
COL4A6-207ENST00000487645 SOGA3Q5TF21 947 aa16.62■□□□□ 0.25
COL4A6-207ENST00000487645 TMX4Q9H1E5 349 aaPredicted RBP16.62■□□□□ 0.25
COL4A6-207ENST00000487645 BSDC1Q9NW68 430 aaPredicted RBP16.62■□□□□ 0.25
COL4A6-207ENST00000487645 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
COL4A6-207ENST00000487645 GPR162Q16538 588 aa16.61■□□□□ 0.25
COL4A6-207ENST00000487645 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
COL4A6-207ENST00000487645 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
COL4A6-207ENST00000487645 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 SRGAP3O43295 1099 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 C21orf2O43822 256 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
COL4A6-207ENST00000487645 MPHOSPH8Q99549 860 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 FER1L6Q2WGJ9 1857 aa16.6■□□□□ 0.25
COL4A6-207ENST00000487645 GRIN3BO60391 1043 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL4A6-207ENST00000487645 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 RTKN2Q8IZC4 609 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
COL4A6-207ENST00000487645 SSH3Q8TE77 659 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 COL4A1P02462 1669 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
COL4A6-207ENST00000487645 PNMA6EA0A0J9YXQ4 647 aa16.58■□□□□ 0.24
COL4A6-207ENST00000487645 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
COL4A6-207ENST00000487645 POLA2Q14181 598 aa16.58■□□□□ 0.24
COL4A6-207ENST00000487645 CCDC93Q567U6 631 aa16.58■□□□□ 0.24
COL4A6-207ENST00000487645 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
COL4A6-207ENST00000487645 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
COL4A6-207ENST00000487645 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
COL4A6-207ENST00000487645 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
COL4A6-207ENST00000487645 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
COL4A6-207ENST00000487645 MINPP1Q9UNW1 487 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms