RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ARFGEF1Q9Y6D6 1849 aa24.7■■□□□ 1.54
SEC22A-208ENST00000487572 NBPF7P0C2Y1 421 aaPredicted RBP24.69■■□□□ 1.54
SEC22A-208ENST00000487572 CCDC152Q4G0S7 254 aa24.69■■□□□ 1.54
SEC22A-208ENST00000487572 PPEF1O14829 653 aaPredicted RBP24.68■■□□□ 1.54
SEC22A-208ENST00000487572 OLFM4Q6UX06 510 aa24.68■■□□□ 1.54
SEC22A-208ENST00000487572 GOLGB1Q14789 3259 aaKnown RBP24.67■■□□□ 1.54
SEC22A-208ENST00000487572 GRAPQ13588 217 aa24.67■■□□□ 1.54
SEC22A-208ENST00000487572 FTSJ3Q8IY81 847 aaKnown RBP24.67■■□□□ 1.54
SEC22A-208ENST00000487572 TTLL11Q8NHH1 800 aa24.67■■□□□ 1.54
SEC22A-208ENST00000487572 GRAPLQ8TC17 118 aaPredicted RBP24.67■■□□□ 1.54
SEC22A-208ENST00000487572 PLA2G12BQ9BX93 195 aa24.67■■□□□ 1.54
SEC22A-208ENST00000487572 SEC31BQ9NQW1 1179 aa24.67■■□□□ 1.54
SEC22A-208ENST00000487572 INTS3Q68E01 1043 aaKnown RBP24.66■■□□□ 1.54
SEC22A-208ENST00000487572 SLC51AQ86UW1 340 aa24.66■■□□□ 1.54
SEC22A-208ENST00000487572 USP44Q9H0E7 712 aa24.66■■□□□ 1.54
SEC22A-208ENST00000487572 UTYO14607 1347 aa24.65■■□□□ 1.54
SEC22A-208ENST00000487572 C7orf43Q8WVR3 580 aa24.65■■□□□ 1.54
SEC22A-208ENST00000487572 CELF1Q92879 486 aaKnown RBP24.65■■□□□ 1.54
SEC22A-208ENST00000487572 SUCLG2Q96I99 432 aa24.65■■□□□ 1.54
SEC22A-208ENST00000487572 GREM2Q9H772 168 aa24.65■■□□□ 1.54
SEC22A-208ENST00000487572 PLIN1O60240 522 aa24.64■■□□□ 1.54
SEC22A-208ENST00000487572 FOXO4P98177 505 aa24.64■■□□□ 1.54
SEC22A-208ENST00000487572 EPHA10Q5JZY3 1008 aa24.64■■□□□ 1.54
SEC22A-208ENST00000487572 DZIP1LQ8IYY4 767 aaKnown RBP24.64■■□□□ 1.54
SEC22A-208ENST00000487572 TMEM57Q8N5G2 664 aa24.64■■□□□ 1.54
SEC22A-208ENST00000487572 CHMP3Q9Y3E7 222 aa24.64■■□□□ 1.54
SEC22A-208ENST00000487572 COL4A1P02462 1669 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 BBOX1O75936 387 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 RASSF7Q02833 373 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 FAM161AQ3B820 660 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 CCDC93Q567U6 631 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 SOGA3Q5TF21 947 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 TAF1P21675 1872 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 MYH3P11055 1940 aa24.63■■□□□ 1.53
SEC22A-208ENST00000487572 RLBP1P12271 317 aa24.62■■□□□ 1.53
SEC22A-208ENST00000487572 CSF1RP07333 972 aa24.61■■□□□ 1.53
SEC22A-208ENST00000487572 UBTFL1P0CB47 393 aaPredicted RBP24.61■■□□□ 1.53
SEC22A-208ENST00000487572 LMBR1LQ6UX01 489 aa24.61■■□□□ 1.53
SEC22A-208ENST00000487572 PANK1Q8TE04 598 aa24.61■■□□□ 1.53
SEC22A-208ENST00000487572 KAZALD1Q96I82 304 aa24.61■■□□□ 1.53
SEC22A-208ENST00000487572 MEIS3Q99687 375 aa24.61■■□□□ 1.53
SEC22A-208ENST00000487572 TMX4Q9H1E5 349 aaPredicted RBP24.61■■□□□ 1.53
SEC22A-208ENST00000487572 ATP6V0A2Q9Y487 856 aa24.61■■□□□ 1.53
SEC22A-208ENST00000487572 RPS8P62241 208 aaKnown RBP24.6■■□□□ 1.53
SEC22A-208ENST00000487572 ITPRIPQ8IWB1 547 aa24.6■■□□□ 1.53
SEC22A-208ENST00000487572 CDC5LQ99459 802 aaKnown RBP24.6■■□□□ 1.53
SEC22A-208ENST00000487572 BICC1Q9H694 974 aaKnown RBP24.6■■□□□ 1.53
SEC22A-208ENST00000487572 RTL9Q8NET4 1388 aa24.59■■□□□ 1.53
SEC22A-208ENST00000487572 NFKBIEO00221 500 aa24.59■■□□□ 1.53
SEC22A-208ENST00000487572 ITGA6P23229 1130 aa24.59■■□□□ 1.53
SEC22A-208ENST00000487572 ANKRD18AQ8IVF6 992 aa24.59■■□□□ 1.53
SEC22A-208ENST00000487572 CC2D2BQ6DHV5 1058 aa24.58■■□□□ 1.53
SEC22A-208ENST00000487572 TMC4Q7Z404 712 aa24.58■■□□□ 1.53
SEC22A-208ENST00000487572 SP8Q8IXZ3 490 aa24.58■■□□□ 1.53
SEC22A-208ENST00000487572 RTKN2Q8IZC4 609 aa24.58■■□□□ 1.53
SEC22A-208ENST00000487572 TAOK3Q9H2K8 898 aa24.58■■□□□ 1.53
SEC22A-208ENST00000487572 ANKRD18BA2A2Z9 1011 aa24.57■■□□□ 1.52
SEC22A-208ENST00000487572 MS4A1P11836 297 aa24.57■■□□□ 1.52
SEC22A-208ENST00000487572 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.57■■□□□ 1.52
SEC22A-208ENST00000487572 UTRNP46939 3433 aa24.56■■□□□ 1.52
SEC22A-208ENST00000487572 GNAI3P08754 354 aa24.56■■□□□ 1.52
SEC22A-208ENST00000487572 IFIT5Q13325 482 aaKnown RBP24.56■■□□□ 1.52
SEC22A-208ENST00000487572 ANKRD44Q8N8A2 993 aa24.56■■□□□ 1.52
SEC22A-208ENST00000487572 LRRFIP2Q9Y608 721 aaKnown RBP24.56■■□□□ 1.52
SEC22A-208ENST00000487572 IGHMBP2P38935 993 aaKnown RBP24.55■■□□□ 1.52
SEC22A-208ENST00000487572 CCDC57Q2TAC2 916 aa24.55■■□□□ 1.52
SEC22A-208ENST00000487572 FER1L6Q2WGJ9 1857 aa24.54■■□□□ 1.52
SEC22A-208ENST00000487572 FKBP4Q02790 459 aaKnown RBP eCLIP24.54■■□□□ 1.52
SEC22A-208ENST00000487572 C9orf131Q5VYM1 1079 aa24.54■■□□□ 1.52
SEC22A-208ENST00000487572 SNED1Q8TER0 1413 aa24.53■■□□□ 1.52
SEC22A-208ENST00000487572 PRELPP51888 382 aa24.53■■□□□ 1.52
SEC22A-208ENST00000487572 RABL6Q3YEC7 729 aaPredicted RBP24.53■■□□□ 1.52
SEC22A-208ENST00000487572 TAF7LQ5H9L4 462 aa24.53■■□□□ 1.52
SEC22A-208ENST00000487572 DPP8Q6V1X1 898 aaPredicted RBP24.53■■□□□ 1.52
SEC22A-208ENST00000487572 RNF181Q9P0P0 153 aa24.53■■□□□ 1.52
SEC22A-208ENST00000487572 HDAC5Q9UQL6 1122 aa24.53■■□□□ 1.52
SEC22A-208ENST00000487572 LTBP3Q9NS15 1303 aa24.53■■□□□ 1.52
SEC22A-208ENST00000487572 SPEF2Q9C093 1822 aa24.52■■□□□ 1.52
SEC22A-208ENST00000487572 LMNB1P20700 586 aa24.52■■□□□ 1.52
SEC22A-208ENST00000487572 GRIPAP1Q4V328 841 aa24.52■■□□□ 1.52
SEC22A-208ENST00000487572 C20orf194Q5TEA3 1177 aa24.52■■□□□ 1.52
SEC22A-208ENST00000487572 MPNDQ8N594 471 aa24.52■■□□□ 1.52
SEC22A-208ENST00000487572 ZNF594Q96JF6 807 aaPredicted RBP24.52■■□□□ 1.52
SEC22A-208ENST00000487572 MPHOSPH8Q99549 860 aa24.52■■□□□ 1.52
SEC22A-208ENST00000487572 ZNF277Q9NRM2 450 aaPredicted RBP24.52■■□□□ 1.52
SEC22A-208ENST00000487572 NSFL1CQ9UNZ2 370 aaKnown RBP24.52■■□□□ 1.52
SEC22A-208ENST00000487572 GPSM2P81274 684 aa24.51■■□□□ 1.51
SEC22A-208ENST00000487572 BSDC1Q9NW68 430 aaPredicted RBP24.51■■□□□ 1.51
SEC22A-208ENST00000487572 COG6Q9Y2V7 657 aa24.51■■□□□ 1.51
SEC22A-208ENST00000487572 LRRC37AA6NMS7 1700 aa24.51■■□□□ 1.51
SEC22A-208ENST00000487572 CHD4Q14839 1912 aa24.51■■□□□ 1.51
SEC22A-208ENST00000487572 YY1P25490 414 aa24.5■■□□□ 1.51
SEC22A-208ENST00000487572 PSMD1Q99460 953 aa24.5■■□□□ 1.51
SEC22A-208ENST00000487572 ANKIB1Q9P2G1 1089 aa24.5■■□□□ 1.51
SEC22A-208ENST00000487572 GNAI2P04899 355 aa24.49■■□□□ 1.51
SEC22A-208ENST00000487572 RRP1P56182 461 aaKnown RBP24.49■■□□□ 1.51
SEC22A-208ENST00000487572 PDE3AQ14432 1141 aa24.48■■□□□ 1.51
SEC22A-208ENST00000487572 MVPQ14764 893 aaKnown RBP24.48■■□□□ 1.51
SEC22A-208ENST00000487572 C1orf115Q9H7X2 142 aa24.48■■□□□ 1.51
SEC22A-208ENST00000487572 MINPP1Q9UNW1 487 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms