RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 BCAR3O75815 825 aa14.79□□□□□ -0.04
CLIP2-207ENST00000487447 RPGRQ92834 1020 aaKnown RBP14.79□□□□□ -0.04
CLIP2-207ENST00000487447 RBM17Q96I25 401 aaKnown RBP14.79□□□□□ -0.04
CLIP2-207ENST00000487447 LTBP3Q9NS15 1303 aa14.78□□□□□ -0.04
CLIP2-207ENST00000487447 GRM8O00222 908 aa14.78□□□□□ -0.04
CLIP2-207ENST00000487447 UBE3BQ7Z3V4 1068 aa14.78□□□□□ -0.04
CLIP2-207ENST00000487447 TIAM2Q8IVF5 1701 aa14.78□□□□□ -0.04
CLIP2-207ENST00000487447 RTL5Q5HYW3 569 aaPredicted RBP14.77□□□□□ -0.05
CLIP2-207ENST00000487447 SOGA3Q5TF21 947 aa14.77□□□□□ -0.05
CLIP2-207ENST00000487447 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
CLIP2-207ENST00000487447 CCDC88AQ3V6T2 1871 aa14.77□□□□□ -0.05
CLIP2-207ENST00000487447 A0A1B0GUL6 1792 aa14.77□□□□□ -0.05
CLIP2-207ENST00000487447 DUOX1Q9NRD9 1551 aa14.77□□□□□ -0.05
CLIP2-207ENST00000487447 SPEF2Q9C093 1822 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 NFKBIEO00221 500 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 CSF1RP07333 972 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 CCT4P50991 539 aaKnown RBP14.76□□□□□ -0.05
CLIP2-207ENST00000487447 CTSWP56202 376 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 GRAPQ13588 217 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 INTS3Q68E01 1043 aaKnown RBP14.76□□□□□ -0.05
CLIP2-207ENST00000487447 CC2D2BQ6DHV5 1058 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 ATF7IPQ6VMQ6 1270 aa14.76□□□□□ -0.05
CLIP2-207ENST00000487447 GRAPLQ8TC17 118 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-207ENST00000487447 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-207ENST00000487447 IPO8O15397 1037 aaKnown RBP14.75□□□□□ -0.05
CLIP2-207ENST00000487447 C21orf2O43822 256 aa14.75□□□□□ -0.05
CLIP2-207ENST00000487447 BBOX1O75936 387 aa14.75□□□□□ -0.05
CLIP2-207ENST00000487447 TRIM27P14373 513 aa14.75□□□□□ -0.05
CLIP2-207ENST00000487447 CCDC93Q567U6 631 aa14.75□□□□□ -0.05
CLIP2-207ENST00000487447 DDX46Q7L014 1031 aaKnown RBP14.75□□□□□ -0.05
CLIP2-207ENST00000487447 TMC4Q7Z404 712 aa14.75□□□□□ -0.05
CLIP2-207ENST00000487447 TTLL11Q8NHH1 800 aa14.75□□□□□ -0.05
CLIP2-207ENST00000487447 PPEF1O14829 653 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-207ENST00000487447 FOXO4P98177 505 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 CCDC152Q4G0S7 254 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 IFFO2Q5TF58 517 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 KAZALD1Q96I82 304 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 USP44Q9H0E7 712 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 NMRK2Q9NPI5 230 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 ATP6V0A2Q9Y487 856 aa14.74□□□□□ -0.05
CLIP2-207ENST00000487447 NBPF7P0C2Y1 421 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-207ENST00000487447 PRELPP51888 382 aa14.73□□□□□ -0.05
CLIP2-207ENST00000487447 C9orf131Q5VYM1 1079 aa14.73□□□□□ -0.05
CLIP2-207ENST00000487447 ZKSCAN2Q63HK3 967 aa14.73□□□□□ -0.05
CLIP2-207ENST00000487447 CELF1Q92879 486 aaKnown RBP14.73□□□□□ -0.05
CLIP2-207ENST00000487447 CEP350Q5VT06 3117 aa14.73□□□□□ -0.05
CLIP2-207ENST00000487447 RABL6Q3YEC7 729 aaPredicted RBP14.72□□□□□ -0.05
CLIP2-207ENST00000487447 SP8Q8IXZ3 490 aa14.72□□□□□ -0.05
CLIP2-207ENST00000487447 RTKN2Q8IZC4 609 aa14.72□□□□□ -0.05
CLIP2-207ENST00000487447 PSMD1Q99460 953 aa14.72□□□□□ -0.05
CLIP2-207ENST00000487447 GREM2Q9H772 168 aa14.72□□□□□ -0.05
CLIP2-207ENST00000487447 C9orf78Q9NZ63 289 aaPredicted RBP14.72□□□□□ -0.05
CLIP2-207ENST00000487447 TNNQ9UQP3 1299 aa14.72□□□□□ -0.05
CLIP2-207ENST00000487447 TOMM70O94826 608 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLIP2-207ENST00000487447 RASSF7Q02833 373 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 EPHA10Q5JZY3 1008 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 OLFM4Q6UX06 510 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 SLC51AQ86UW1 340 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 SUCLG2Q96I99 432 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 SEC31BQ9NQW1 1179 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.05
CLIP2-207ENST00000487447 ZC3H4Q9UPT8 1303 aaKnown RBP14.7□□□□□ -0.06
CLIP2-207ENST00000487447 RPS8P62241 208 aaKnown RBP14.7□□□□□ -0.06
CLIP2-207ENST00000487447 FRAT1Q92837 279 aaPredicted RBP14.7□□□□□ -0.06
CLIP2-207ENST00000487447 RTFDC1Q9BY42 306 aaPredicted RBP14.7□□□□□ -0.06
CLIP2-207ENST00000487447 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
CLIP2-207ENST00000487447 COL4A5P29400 1685 aa14.69□□□□□ -0.06
CLIP2-207ENST00000487447 LMNB1P20700 586 aa14.69□□□□□ -0.06
CLIP2-207ENST00000487447 FAM161AQ3B820 660 aa14.69□□□□□ -0.06
CLIP2-207ENST00000487447 CDC5LQ99459 802 aaKnown RBP14.69□□□□□ -0.06
CLIP2-207ENST00000487447 RNF181Q9P0P0 153 aa14.69□□□□□ -0.06
CLIP2-207ENST00000487447 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
CLIP2-207ENST00000487447 APLP1P51693 650 aa14.68□□□□□ -0.06
CLIP2-207ENST00000487447 LMBR1LQ6UX01 489 aa14.68□□□□□ -0.06
CLIP2-207ENST00000487447 ANKRD44Q8N8A2 993 aa14.68□□□□□ -0.06
CLIP2-207ENST00000487447 YTHDC1Q96MU7 727 aaKnown RBP14.68□□□□□ -0.06
CLIP2-207ENST00000487447 RLBP1P12271 317 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 ITGA6P23229 1130 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 ANKRD18AQ8IVF6 992 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
CLIP2-207ENST00000487447 TMEM57Q8N5G2 664 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 CCDC85AQ96PX6 553 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-207ENST00000487447 MEIS3Q99687 375 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 VPS33BQ9H267 617 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 BICC1Q9H694 974 aaKnown RBP14.67□□□□□ -0.06
CLIP2-207ENST00000487447 BSDC1Q9NW68 430 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-207ENST00000487447 PODXL2Q9NZ53 605 aa14.67□□□□□ -0.06
CLIP2-207ENST00000487447 C16orf71Q8IYS4 520 aaPredicted RBP14.66□□□□□ -0.06
CLIP2-207ENST00000487447 DNAJC5GQ8N7S2 189 aa14.66□□□□□ -0.06
CLIP2-207ENST00000487447 CLUAP1Q96AJ1 413 aa14.66□□□□□ -0.06
CLIP2-207ENST00000487447 RRAGCQ9HB90 399 aa14.66□□□□□ -0.06
CLIP2-207ENST00000487447 PSME4Q14997 1843 aa14.65□□□□□ -0.06
CLIP2-207ENST00000487447 ANKRD18BA2A2Z9 1011 aa14.65□□□□□ -0.06
CLIP2-207ENST00000487447 GNAI3P08754 354 aa14.65□□□□□ -0.06
CLIP2-207ENST00000487447 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
CLIP2-207ENST00000487447 MS4A1P11836 297 aa14.65□□□□□ -0.06
CLIP2-207ENST00000487447 IARSP41252 1262 aaKnown RBP14.65□□□□□ -0.06
CLIP2-207ENST00000487447 HTRA3P83110 453 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms