RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
ITSN1-229ENST00000487427 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
ITSN1-229ENST00000487427 GRAPLQ8TC17 118 aaPredicted RBP15.99■□□□□ 0.15
ITSN1-229ENST00000487427 L3MBTL3Q96JM7 780 aaPredicted RBP15.99■□□□□ 0.15
ITSN1-229ENST00000487427 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
ITSN1-229ENST00000487427 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
ITSN1-229ENST00000487427 PI4KAP2A4QPH2 592 aa15.98■□□□□ 0.15
ITSN1-229ENST00000487427 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
ITSN1-229ENST00000487427 PCCAP05165 728 aaPredicted RBP15.98■□□□□ 0.15
ITSN1-229ENST00000487427 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
ITSN1-229ENST00000487427 PI4KAP1Q8N8J0 262 aa15.98■□□□□ 0.15
ITSN1-229ENST00000487427 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
ITSN1-229ENST00000487427 RTFDC1Q9BY42 306 aaPredicted RBP15.98■□□□□ 0.15
ITSN1-229ENST00000487427 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
ITSN1-229ENST00000487427 VAMP4O75379 141 aa15.97■□□□□ 0.15
ITSN1-229ENST00000487427 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
ITSN1-229ENST00000487427 MPNDQ8N594 471 aa15.97■□□□□ 0.15
ITSN1-229ENST00000487427 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
ITSN1-229ENST00000487427 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
ITSN1-229ENST00000487427 ZNF541Q9H0D2 1346 aa15.96■□□□□ 0.15
ITSN1-229ENST00000487427 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
ITSN1-229ENST00000487427 EXOSC9Q06265 439 aaKnown RBP15.96■□□□□ 0.15
ITSN1-229ENST00000487427 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.15
ITSN1-229ENST00000487427 DPP8Q6V1X1 898 aaPredicted RBP15.96■□□□□ 0.15
ITSN1-229ENST00000487427 G2E3Q7L622 706 aa15.96■□□□□ 0.15
ITSN1-229ENST00000487427 GPC2Q8N158 579 aa15.96■□□□□ 0.15
ITSN1-229ENST00000487427 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
ITSN1-229ENST00000487427 TIAM2Q8IVF5 1701 aa15.95■□□□□ 0.14
ITSN1-229ENST00000487427 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
ITSN1-229ENST00000487427 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
ITSN1-229ENST00000487427 DICER1Q9UPY3 1922 aaKnown RBP15.95■□□□□ 0.14
ITSN1-229ENST00000487427 ANKRD36CQ5JPF3 1778 aa15.95■□□□□ 0.14
ITSN1-229ENST00000487427 WDR90Q96KV7 1748 aa15.94■□□□□ 0.14
ITSN1-229ENST00000487427 CEP350Q5VT06 3117 aa15.94■□□□□ 0.14
ITSN1-229ENST00000487427 PDE8AO60658 829 aa15.94■□□□□ 0.14
ITSN1-229ENST00000487427 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
ITSN1-229ENST00000487427 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
ITSN1-229ENST00000487427 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
ITSN1-229ENST00000487427 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
ITSN1-229ENST00000487427 HACL1Q9UJ83 578 aa15.94■□□□□ 0.14
ITSN1-229ENST00000487427 FLIIQ13045 1269 aa15.93■□□□□ 0.14
ITSN1-229ENST00000487427 AOC3Q16853 763 aa15.93■□□□□ 0.14
ITSN1-229ENST00000487427 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
ITSN1-229ENST00000487427 DNAJC5GQ8N7S2 189 aa15.93■□□□□ 0.14
ITSN1-229ENST00000487427 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
ITSN1-229ENST00000487427 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
ITSN1-229ENST00000487427 KIAA2012Q0VF49 1180 aa15.92■□□□□ 0.14
ITSN1-229ENST00000487427 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
ITSN1-229ENST00000487427 ZNRF3Q9ULT6 936 aa15.92■□□□□ 0.14
ITSN1-229ENST00000487427 GJA3Q9Y6H8 435 aa15.92■□□□□ 0.14
ITSN1-229ENST00000487427 CDHR2Q9BYE9 1310 aa15.92■□□□□ 0.14
ITSN1-229ENST00000487427 EPHX2P34913 555 aa15.91■□□□□ 0.14
ITSN1-229ENST00000487427 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
ITSN1-229ENST00000487427 CWF19L2Q2TBE0 894 aaKnown RBP15.91■□□□□ 0.14
ITSN1-229ENST00000487427 PNMA8AQ86V59 439 aaPredicted RBP15.91■□□□□ 0.14
ITSN1-229ENST00000487427 LDHDQ86WU2 507 aa15.91■□□□□ 0.14
ITSN1-229ENST00000487427 SEC31BQ9NQW1 1179 aa15.91■□□□□ 0.14
ITSN1-229ENST00000487427 NSFL1CQ9UNZ2 370 aaKnown RBP15.91■□□□□ 0.14
ITSN1-229ENST00000487427 ZNF521Q96K83 1311 aa15.91■□□□□ 0.14
ITSN1-229ENST00000487427 H7C1W4 665 aa15.9■□□□□ 0.14
ITSN1-229ENST00000487427 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
ITSN1-229ENST00000487427 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
ITSN1-229ENST00000487427 DNAAF4Q8WXU2 420 aa15.9■□□□□ 0.14
ITSN1-229ENST00000487427 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
ITSN1-229ENST00000487427 CXCL9Q07325 125 aa15.89■□□□□ 0.13
ITSN1-229ENST00000487427 GCKRQ14397 625 aa15.89■□□□□ 0.13
ITSN1-229ENST00000487427 WASHC4Q2M389 1173 aa15.89■□□□□ 0.13
ITSN1-229ENST00000487427 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
ITSN1-229ENST00000487427 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
ITSN1-229ENST00000487427 COL4A5P29400 1685 aa15.89■□□□□ 0.13
ITSN1-229ENST00000487427 C6orf229H3BNL8 230 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 CAPN15O75808 1086 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 CTSWP56202 376 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 GPSM2P81274 684 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 HTRA3P83110 453 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 POLLQ9UGP5 575 aa15.88■□□□□ 0.13
ITSN1-229ENST00000487427 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 SCNN1DP51172 638 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 TNIP1Q15025 636 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 UBE3BQ7Z3V4 1068 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 CCDC85AQ96PX6 553 aaPredicted RBP15.87■□□□□ 0.13
ITSN1-229ENST00000487427 EYA3Q99504 573 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
ITSN1-229ENST00000487427 DDX60Q8IY21 1712 aaKnown RBP15.86■□□□□ 0.13
ITSN1-229ENST00000487427 LAMB2P55268 1798 aa15.86■□□□□ 0.13
ITSN1-229ENST00000487427 EPS15P42566 896 aa15.86■□□□□ 0.13
ITSN1-229ENST00000487427 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
ITSN1-229ENST00000487427 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
ITSN1-229ENST00000487427 KLRG1Q96E93 195 aa15.86■□□□□ 0.13
ITSN1-229ENST00000487427 CDC5LQ99459 802 aaKnown RBP15.86■□□□□ 0.13
ITSN1-229ENST00000487427 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
ITSN1-229ENST00000487427 E9PSI1 815 aa15.85■□□□□ 0.13
ITSN1-229ENST00000487427 RAD17O75943 681 aa15.85■□□□□ 0.13
ITSN1-229ENST00000487427 ITGBL1O95965 494 aaPredicted RBP15.85■□□□□ 0.13
ITSN1-229ENST00000487427 PLA2G12BQ9BX93 195 aa15.85■□□□□ 0.13
ITSN1-229ENST00000487427 ZC3H12CQ9C0D7 883 aaKnown RBP15.85■□□□□ 0.13
ITSN1-229ENST00000487427 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms