RNA–Protein interactions for RNA: ENST00000487290.5

HCLS1-208, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-208ENST00000487290 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
HCLS1-208ENST00000487290 CTSWP56202 376 aa20.95■□□□□ 0.94
HCLS1-208ENST00000487290 GPR162Q16538 588 aa20.95■□□□□ 0.94
HCLS1-208ENST00000487290 ZNF622Q969S3 477 aaKnown RBP eCLIP20.95■□□□□ 0.94
HCLS1-208ENST00000487290 BCS1LQ9Y276 419 aa20.95■□□□□ 0.94
HCLS1-208ENST00000487290 CSF1RP07333 972 aa20.94■□□□□ 0.94
HCLS1-208ENST00000487290 USP44Q9H0E7 712 aa20.94■□□□□ 0.94
HCLS1-208ENST00000487290 GRAPQ13588 217 aa20.93■□□□□ 0.94
HCLS1-208ENST00000487290 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
HCLS1-208ENST00000487290 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
HCLS1-208ENST00000487290 SOGA3Q5TF21 947 aa20.93■□□□□ 0.94
HCLS1-208ENST00000487290 TTLL11Q8NHH1 800 aa20.93■□□□□ 0.94
HCLS1-208ENST00000487290 GRAPLQ8TC17 118 aaPredicted RBP20.93■□□□□ 0.94
HCLS1-208ENST00000487290 DICER1Q9UPY3 1922 aaKnown RBP20.92■□□□□ 0.94
HCLS1-208ENST00000487290 DCAF8L1A6NGE4 600 aa20.92■□□□□ 0.94
HCLS1-208ENST00000487290 TMC4Q7Z404 712 aa20.92■□□□□ 0.94
HCLS1-208ENST00000487290 KAZALD1Q96I82 304 aa20.92■□□□□ 0.94
HCLS1-208ENST00000487290 LTBP3Q9NS15 1303 aa20.92■□□□□ 0.94
HCLS1-208ENST00000487290 NBPF7P0C2Y1 421 aaPredicted RBP20.91■□□□□ 0.94
HCLS1-208ENST00000487290 FOXO4P98177 505 aa20.91■□□□□ 0.94
HCLS1-208ENST00000487290 RABL6Q3YEC7 729 aaPredicted RBP20.91■□□□□ 0.94
HCLS1-208ENST00000487290 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
HCLS1-208ENST00000487290 DDX46Q7L014 1031 aaKnown RBP20.91■□□□□ 0.94
HCLS1-208ENST00000487290 JARID2Q92833 1246 aaPredicted RBP20.91■□□□□ 0.94
HCLS1-208ENST00000487290 FRAT1Q92837 279 aaPredicted RBP20.91■□□□□ 0.94
HCLS1-208ENST00000487290 C9orf78Q9NZ63 289 aaPredicted RBP20.91■□□□□ 0.94
HCLS1-208ENST00000487290 A0A1B0GUL6 1792 aa20.9■□□□□ 0.94
HCLS1-208ENST00000487290 BBOX1O75936 387 aa20.9■□□□□ 0.94
HCLS1-208ENST00000487290 GRIPAP1Q4V328 841 aa20.9■□□□□ 0.94
HCLS1-208ENST00000487290 TNNQ9UQP3 1299 aa20.9■□□□□ 0.94
HCLS1-208ENST00000487290 SPEF2Q9C093 1822 aa20.9■□□□□ 0.94
HCLS1-208ENST00000487290 DUOX1Q9NRD9 1551 aa20.89■□□□□ 0.94
HCLS1-208ENST00000487290 PPEF1O14829 653 aaPredicted RBP20.88■□□□□ 0.93
HCLS1-208ENST00000487290 EPHA10Q5JZY3 1008 aa20.88■□□□□ 0.93
HCLS1-208ENST00000487290 DZIP1LQ8IYY4 767 aaKnown RBP20.88■□□□□ 0.93
HCLS1-208ENST00000487290 SUCLG2Q96I99 432 aa20.88■□□□□ 0.93
HCLS1-208ENST00000487290 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
HCLS1-208ENST00000487290 ATP6V0A2Q9Y487 856 aa20.88■□□□□ 0.93
HCLS1-208ENST00000487290 CCDC88AQ3V6T2 1871 aa20.88■□□□□ 0.93
HCLS1-208ENST00000487290 NFKBIEO00221 500 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 C21orf2O43822 256 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 MS4A1P11836 297 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 RLBP1P12271 317 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 CCDC93Q567U6 631 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
HCLS1-208ENST00000487290 TMEM57Q8N5G2 664 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 CELF1Q92879 486 aaKnown RBP20.87■□□□□ 0.93
HCLS1-208ENST00000487290 GREM2Q9H772 168 aa20.87■□□□□ 0.93
HCLS1-208ENST00000487290 SP8Q8IXZ3 490 aa20.86■□□□□ 0.93
HCLS1-208ENST00000487290 ANKRD44Q8N8A2 993 aa20.86■□□□□ 0.93
HCLS1-208ENST00000487290 SEC31BQ9NQW1 1179 aa20.86■□□□□ 0.93
HCLS1-208ENST00000487290 TIAM2Q8IVF5 1701 aa20.85■□□□□ 0.93
HCLS1-208ENST00000487290 FAM161AQ3B820 660 aa20.85■□□□□ 0.93
HCLS1-208ENST00000487290 RTKN2Q8IZC4 609 aa20.85■□□□□ 0.93
HCLS1-208ENST00000487290 CDC5LQ99459 802 aaKnown RBP20.85■□□□□ 0.93
HCLS1-208ENST00000487290 PSMD1Q99460 953 aa20.85■□□□□ 0.93
HCLS1-208ENST00000487290 GNAI3P08754 354 aa20.84■□□□□ 0.93
HCLS1-208ENST00000487290 RPS8P62241 208 aaKnown RBP20.84■□□□□ 0.93
HCLS1-208ENST00000487290 PDE3AQ14432 1141 aa20.84■□□□□ 0.93
HCLS1-208ENST00000487290 FTSJ3Q8IY81 847 aaKnown RBP20.84■□□□□ 0.93
HCLS1-208ENST00000487290 CLUAP1Q96AJ1 413 aa20.84■□□□□ 0.93
HCLS1-208ENST00000487290 MEIS3Q99687 375 aa20.84■□□□□ 0.93
HCLS1-208ENST00000487290 HDAC5Q9UQL6 1122 aa20.84■□□□□ 0.93
HCLS1-208ENST00000487290 UBTFL1P0CB47 393 aaPredicted RBP20.83■□□□□ 0.93
HCLS1-208ENST00000487290 ITGA6P23229 1130 aa20.83■□□□□ 0.93
HCLS1-208ENST00000487290 LMBR1LQ6UX01 489 aa20.83■□□□□ 0.93
HCLS1-208ENST00000487290 RTFDC1Q9BY42 306 aaPredicted RBP20.83■□□□□ 0.93
HCLS1-208ENST00000487290 BICC1Q9H694 974 aaKnown RBP20.83■□□□□ 0.93
HCLS1-208ENST00000487290 FKBP4Q02790 459 aaKnown RBP eCLIP20.82■□□□□ 0.92
HCLS1-208ENST00000487290 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.82■□□□□ 0.92
HCLS1-208ENST00000487290 TAOK3Q9H2K8 898 aa20.82■□□□□ 0.92
HCLS1-208ENST00000487290 BSDC1Q9NW68 430 aaPredicted RBP20.82■□□□□ 0.92
HCLS1-208ENST00000487290 ZC3H4Q9UPT8 1303 aaKnown RBP20.81■□□□□ 0.92
HCLS1-208ENST00000487290 PRELPP51888 382 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 MTX1Q13505 466 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 OLFM4Q6UX06 510 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 ARHGAP27Q6ZUM4 889 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 SLC51AQ86UW1 340 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 ANKRD18AQ8IVF6 992 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 PODXL2Q9NZ53 605 aa20.81■□□□□ 0.92
HCLS1-208ENST00000487290 ANKRD18BA2A2Z9 1011 aa20.79■□□□□ 0.92
HCLS1-208ENST00000487290 ZBTB7BO15156 539 aaPredicted RBP20.79■□□□□ 0.92
HCLS1-208ENST00000487290 RASSF7Q02833 373 aa20.79■□□□□ 0.92
HCLS1-208ENST00000487290 IFIT5Q13325 482 aaKnown RBP20.79■□□□□ 0.92
HCLS1-208ENST00000487290 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
HCLS1-208ENST00000487290 PANK1Q8TE04 598 aa20.79■□□□□ 0.92
HCLS1-208ENST00000487290 CCDC85AQ96PX6 553 aaPredicted RBP20.79■□□□□ 0.92
HCLS1-208ENST00000487290 VPS33BQ9H267 617 aa20.79■□□□□ 0.92
HCLS1-208ENST00000487290 LMNB1P20700 586 aa20.78■□□□□ 0.92
HCLS1-208ENST00000487290 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
HCLS1-208ENST00000487290 LRRFIP2Q9Y608 721 aaKnown RBP20.78■□□□□ 0.92
HCLS1-208ENST00000487290 COL4A5P29400 1685 aa20.77■□□□□ 0.92
HCLS1-208ENST00000487290 PLIN1O60240 522 aa20.77■□□□□ 0.92
HCLS1-208ENST00000487290 IGHMBP2P38935 993 aaKnown RBP20.77■□□□□ 0.92
HCLS1-208ENST00000487290 RFX5P48382 616 aaPredicted RBP20.77■□□□□ 0.92
HCLS1-208ENST00000487290 CCDC57Q2TAC2 916 aa20.77■□□□□ 0.92
HCLS1-208ENST00000487290 ITPRIPQ8IWB1 547 aa20.77■□□□□ 0.92
HCLS1-208ENST00000487290 ZNF219Q9P2Y4 722 aaPredicted RBP20.77■□□□□ 0.92
HCLS1-208ENST00000487290 GNAI2P04899 355 aa20.76■□□□□ 0.91
HCLS1-208ENST00000487290 TMX4Q9H1E5 349 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms