RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 CHMP3Q9Y3E7 222 aa8.85□□□□□ -0.99
CCNB3-206ENST00000487204 UBN2Q6ZU65 1347 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 USP42Q9H9J4 1324 aaKnown RBP8.84□□□□□ -0.99
CCNB3-206ENST00000487204 ANKRD18BA2A2Z9 1011 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 IFIT2P09913 472 aaKnown RBP8.84□□□□□ -0.99
CCNB3-206ENST00000487204 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
CCNB3-206ENST00000487204 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
CCNB3-206ENST00000487204 PDE1AP54750 535 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 PTPN12Q05209 780 aaKnown RBP8.84□□□□□ -0.99
CCNB3-206ENST00000487204 CCDC152Q4G0S7 254 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 EPHA10Q5JZY3 1008 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 TTC22Q5TAA0 569 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 SUSD4Q5VX71 490 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 TPTE2Q6XPS3 522 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 LRRC4BQ9NT99 713 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 MYH14Q7Z406 1995 aaKnown RBP8.84□□□□□ -0.99
CCNB3-206ENST00000487204 NUP98P52948 1817 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 RTL9Q8NET4 1388 aa8.84□□□□□ -0.99
CCNB3-206ENST00000487204 BCORQ6W2J9 1755 aa8.84□□□□□ -1
CCNB3-206ENST00000487204 TAF1LQ8IZX4 1826 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 EYA2O00167 538 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 SMARCA5O60264 1052 aaPredicted RBP8.83□□□□□ -1
CCNB3-206ENST00000487204 NTSR2O95665 410 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 KCNQ4P56696 695 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 C8orf34Q49A92 452 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 SLC10A5Q5PT55 438 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 SKAP1Q86WV1 359 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 CCDC125Q86Z20 511 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 AKAP2Q9Y2D5 859 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 SCN7AQ01118 1682 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 RGPD3A6NKT7 1758 aaPredicted RBP8.83□□□□□ -1
CCNB3-206ENST00000487204 RGPD4Q7Z3J3 1758 aa8.83□□□□□ -1
CCNB3-206ENST00000487204 SALL3Q9BXA9 1300 aa8.82□□□□□ -1
CCNB3-206ENST00000487204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 GLRX3O76003 335 aaKnown RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 NBPF5PQ86XG9 351 aaPredicted RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 TICAM2Q86XR7 235 aa8.82□□□□□ -1
CCNB3-206ENST00000487204 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 CDC5LQ99459 802 aaKnown RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 TFCP2L1Q9NZI6 479 aa8.82□□□□□ -1
CCNB3-206ENST00000487204 CEP126Q9P2H0 1117 aa8.82□□□□□ -1
CCNB3-206ENST00000487204 PA2G4Q9UQ80 394 aaKnown RBP8.82□□□□□ -1
CCNB3-206ENST00000487204 CARMIL3Q8ND23 1372 aa8.82□□□□□ -1
CCNB3-206ENST00000487204 NPHP1O15259 732 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 CDC45O75419 566 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 PHF14O94880 888 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 SASH1O94885 1247 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 ITGA6P23229 1130 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 BAG6P46379 1132 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 SF3B3Q15393 1217 aaKnown RBP8.81□□□□□ -1
CCNB3-206ENST00000487204 TBC1D9BQ66K14 1250 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 AACSQ86V21 672 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 C16orf71Q8IYS4 520 aaPredicted RBP8.81□□□□□ -1
CCNB3-206ENST00000487204 PROM2Q8N271 834 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 NLGN1Q8N2Q7 840 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 NLRP3Q96P20 1036 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 SIL1Q9H173 461 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 IL1RAPL2Q9NP60 686 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
CCNB3-206ENST00000487204 ECHDC1Q9NTX5 307 aa8.81□□□□□ -1
CCNB3-206ENST00000487204 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
CCNB3-206ENST00000487204 MROH5Q6ZUA9 1318 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 IGHMBP2P38935 993 aaKnown RBP8.8□□□□□ -1
CCNB3-206ENST00000487204 ANP32AP39687 249 aaKnown RBP8.8□□□□□ -1
CCNB3-206ENST00000487204 TNNI3KQ59H18 835 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 LDHAL6AQ6ZMR3 332 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 CNTROBQ8N137 903 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 MPHOSPH8Q99549 860 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 CNNM1Q9NRU3 951 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 FPGT-TNNI3KV9GXZ4 949 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 RIC1Q4ADV7 1423 aa8.8□□□□□ -1
CCNB3-206ENST00000487204 HIP1O00291 1037 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 GYS1P13807 737 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 HCLS1P14317 486 aaPredicted RBP8.79□□□□□ -1
CCNB3-206ENST00000487204 ST5P78524 1137 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 TFCP2Q12800 502 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 ERFEQ4G0M1 354 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 NUTM1Q86Y26 1132 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 CNBD1Q8NA66 436 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 KLHDC4Q8TBB5 520 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 BCL11AQ9H165 835 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 GREM2Q9H772 168 aa8.79□□□□□ -1
CCNB3-206ENST00000487204 SRP68Q9UHB9 627 aaKnown RBP8.79□□□□□ -1
CCNB3-206ENST00000487204 ABCC12Q96J65 1359 aa8.78□□□□□ -1
CCNB3-206ENST00000487204 FAM177BA6PVY3 158 aa8.78□□□□□ -1
CCNB3-206ENST00000487204 TRIM6-TRIM34B2RNG4 842 aa8.78□□□□□ -1
CCNB3-206ENST00000487204 EPB41L2O43491 1005 aaKnown RBP8.78□□□□□ -1
CCNB3-206ENST00000487204 GSPT1P15170 499 aaKnown RBP8.78□□□□□ -1
CCNB3-206ENST00000487204 ATP5JP18859 108 aa8.78□□□□□ -1
CCNB3-206ENST00000487204 SDSP20132 328 aa8.78□□□□□ -1
CCNB3-206ENST00000487204 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
CCNB3-206ENST00000487204 NFIXQ14938 502 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms