RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ABCC4O15439 1325 aa13□□□□□ -0.33
NEK4-204ENST00000487068 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
NEK4-204ENST00000487068 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
NEK4-204ENST00000487068 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
NEK4-204ENST00000487068 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
NEK4-204ENST00000487068 CWF19L2Q2TBE0 894 aaKnown RBP13□□□□□ -0.33
NEK4-204ENST00000487068 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
NEK4-204ENST00000487068 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
NEK4-204ENST00000487068 TNS4Q8IZW8 715 aa13□□□□□ -0.33
NEK4-204ENST00000487068 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
NEK4-204ENST00000487068 TAOK3Q9H2K8 898 aa13□□□□□ -0.33
NEK4-204ENST00000487068 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
NEK4-204ENST00000487068 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
NEK4-204ENST00000487068 F6X3S4 739 aa12.99□□□□□ -0.33
NEK4-204ENST00000487068 CAPN15O75808 1086 aa12.99□□□□□ -0.33
NEK4-204ENST00000487068 LMNB1P20700 586 aa12.99□□□□□ -0.33
NEK4-204ENST00000487068 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
NEK4-204ENST00000487068 NEURL1BA8MQ27 555 aa12.98□□□□□ -0.33
NEK4-204ENST00000487068 NFKBIEO00221 500 aa12.98□□□□□ -0.33
NEK4-204ENST00000487068 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
NEK4-204ENST00000487068 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
NEK4-204ENST00000487068 SLC10A5Q5PT55 438 aa12.98□□□□□ -0.33
NEK4-204ENST00000487068 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
NEK4-204ENST00000487068 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
NEK4-204ENST00000487068 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
NEK4-204ENST00000487068 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
NEK4-204ENST00000487068 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
NEK4-204ENST00000487068 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
NEK4-204ENST00000487068 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
NEK4-204ENST00000487068 COL4A1P02462 1669 aa12.96□□□□□ -0.33
NEK4-204ENST00000487068 PDE8AO60658 829 aa12.96□□□□□ -0.33
NEK4-204ENST00000487068 GRAPQ13588 217 aa12.96□□□□□ -0.33
NEK4-204ENST00000487068 RTKN2Q8IZC4 609 aa12.96□□□□□ -0.33
NEK4-204ENST00000487068 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
NEK4-204ENST00000487068 GRAPLQ8TC17 118 aaPredicted RBP12.96□□□□□ -0.33
NEK4-204ENST00000487068 SSH1Q8WYL5 1049 aa12.96□□□□□ -0.33
NEK4-204ENST00000487068 PTPRCP08575 1304 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 LTBP3Q9NS15 1303 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 PRELPP51888 382 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
NEK4-204ENST00000487068 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
NEK4-204ENST00000487068 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
NEK4-204ENST00000487068 GLTPD2A6NH11 291 aa12.94□□□□□ -0.34
NEK4-204ENST00000487068 CT47B1P0C2W7 299 aaPredicted RBP12.94□□□□□ -0.34
NEK4-204ENST00000487068 HSPA1AP0DMV8 641 aaKnown RBP12.94□□□□□ -0.34
NEK4-204ENST00000487068 HSPA1BP0DMV9 641 aaKnown RBP12.94□□□□□ -0.34
NEK4-204ENST00000487068 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
NEK4-204ENST00000487068 CTSWP56202 376 aa12.94□□□□□ -0.34
NEK4-204ENST00000487068 GCKRQ14397 625 aa12.94□□□□□ -0.34
NEK4-204ENST00000487068 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
NEK4-204ENST00000487068 TRMT2AQ8IZ69 625 aaKnown RBP12.94□□□□□ -0.34
NEK4-204ENST00000487068 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
NEK4-204ENST00000487068 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
NEK4-204ENST00000487068 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
NEK4-204ENST00000487068 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
NEK4-204ENST00000487068 SCN4AP35499 1836 aa12.93□□□□□ -0.34
NEK4-204ENST00000487068 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
NEK4-204ENST00000487068 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
NEK4-204ENST00000487068 C7orf43Q8WVR3 580 aa12.93□□□□□ -0.34
NEK4-204ENST00000487068 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
NEK4-204ENST00000487068 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
NEK4-204ENST00000487068 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
NEK4-204ENST00000487068 BBOX1O75936 387 aa12.92□□□□□ -0.34
NEK4-204ENST00000487068 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
NEK4-204ENST00000487068 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
NEK4-204ENST00000487068 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
NEK4-204ENST00000487068 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
NEK4-204ENST00000487068 TMC4Q7Z404 712 aa12.92□□□□□ -0.34
NEK4-204ENST00000487068 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
NEK4-204ENST00000487068 DUOX1Q9NRD9 1551 aa12.92□□□□□ -0.34
NEK4-204ENST00000487068 SNED1Q8TER0 1413 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 PSME4Q14997 1843 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 ANKRD18AQ8IVF6 992 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 MPNDQ8N594 471 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
NEK4-204ENST00000487068 PSMD1Q99460 953 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 MYH13Q9UKX3 1938 aa12.91□□□□□ -0.34
NEK4-204ENST00000487068 H7C1W4 665 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 GRM8O00222 908 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 PPIP5K2O43314 1243 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 ALDH1L1O75891 902 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 DPY19L2Q6NUT2 758 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 SP8Q8IXZ3 490 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 LARGE2Q8N3Y3 721 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 JDP2Q8WYK2 163 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.34
NEK4-204ENST00000487068 GREM2Q9H772 168 aa12.9□□□□□ -0.34
NEK4-204ENST00000487068 RARSP54136 660 aaKnown RBP12.89□□□□□ -0.35
NEK4-204ENST00000487068 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
NEK4-204ENST00000487068 AOC3Q16853 763 aa12.89□□□□□ -0.35
NEK4-204ENST00000487068 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
NEK4-204ENST00000487068 NIM1KQ8IY84 436 aa12.89□□□□□ -0.35
NEK4-204ENST00000487068 API5Q9BZZ5 524 aaKnown RBP12.89□□□□□ -0.35
NEK4-204ENST00000487068 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
NEK4-204ENST00000487068 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms