RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 KIAA2012Q0VF49 1180 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 CTU1Q7Z7A3 348 aaKnown RBP10.17□□□□□ -0.78
PDPN-205ENST00000487038 MPNDQ8N594 471 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 TRPM4Q8TD43 1214 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 PNISRQ8TF01 805 aaKnown RBP10.17□□□□□ -0.78
PDPN-205ENST00000487038 PHACTR3Q96KR7 559 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 ZBTB3Q9H5J0 574 aa10.17□□□□□ -0.78
PDPN-205ENST00000487038 GBA2Q9HCG7 927 aaPredicted RBP10.17□□□□□ -0.78
PDPN-205ENST00000487038 CNOT7Q9UIV1 285 aaKnown RBP10.17□□□□□ -0.78
PDPN-205ENST00000487038 RBBP6Q7Z6E9 1792 aaKnown RBP10.16□□□□□ -0.78
PDPN-205ENST00000487038 FAM155AB1AL88 458 aaPredicted RBP10.16□□□□□ -0.78
PDPN-205ENST00000487038 TRPA1O75762 1119 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 RAD17O75943 681 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 NEFMP07197 916 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 MYL6BP14649 208 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 KIF23Q02241 960 aaPredicted RBP10.16□□□□□ -0.78
PDPN-205ENST00000487038 TAF7Q15545 349 aaPredicted RBP10.16□□□□□ -0.78
PDPN-205ENST00000487038 SUSD4Q5VX71 490 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 USP48Q86UV5 1035 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
PDPN-205ENST00000487038 DCPSQ96C86 337 aaKnown RBP10.16□□□□□ -0.78
PDPN-205ENST00000487038 CUL9Q8IWT3 2517 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 CEP290O15078 2479 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 ERBB4Q15303 1308 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
PDPN-205ENST00000487038 BBOX1O75936 387 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 HIRAP54198 1017 aaPredicted RBP10.15□□□□□ -0.78
PDPN-205ENST00000487038 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
PDPN-205ENST00000487038 PKN2Q16513 984 aaKnown RBP10.15□□□□□ -0.78
PDPN-205ENST00000487038 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
PDPN-205ENST00000487038 TTLL7Q6ZT98 887 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 TMC4Q7Z404 712 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 SP8Q8IXZ3 490 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 ZNF34Q8IZ26 560 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 DPF2Q92785 391 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 ZIC5Q96T25 663 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 RNF186Q9NXI6 227 aa10.15□□□□□ -0.78
PDPN-205ENST00000487038 RRP7AQ9Y3A4 280 aaKnown RBP10.15□□□□□ -0.78
PDPN-205ENST00000487038 SLC10A3P09131 477 aa10.14□□□□□ -0.79
PDPN-205ENST00000487038 U2AF1L5P0DN76 240 aaPredicted RBP10.14□□□□□ -0.79
PDPN-205ENST00000487038 U2AF1Q01081 240 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDPN-205ENST00000487038 DCTN1Q14203 1278 aa10.14□□□□□ -0.79
PDPN-205ENST00000487038 DDX46Q7L014 1031 aaKnown RBP10.14□□□□□ -0.79
PDPN-205ENST00000487038 UTP14AQ9BVJ6 771 aaKnown RBP10.14□□□□□ -0.79
PDPN-205ENST00000487038 RPS12P25398 132 aaKnown RBP10.13□□□□□ -0.79
PDPN-205ENST00000487038 GRAPQ13588 217 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 CNGB1Q14028 1251 aaPredicted RBP10.13□□□□□ -0.79
PDPN-205ENST00000487038 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 C3orf67Q6ZVT6 689 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 SLC51AQ86UW1 340 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 GRAPLQ8TC17 118 aaPredicted RBP10.13□□□□□ -0.79
PDPN-205ENST00000487038 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
PDPN-205ENST00000487038 HTTP42858 3142 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 LAMB1P07942 1786 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 YDJCA8MPS7 323 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 ADM5C9JUS6 153 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 TBC1D10BQ4KMP7 808 aaPredicted RBP10.12□□□□□ -0.79
PDPN-205ENST00000487038 SLC10A5Q5PT55 438 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 SCN9AQ15858 1988 aa10.12□□□□□ -0.79
PDPN-205ENST00000487038 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 PSMD14O00487 310 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 WASHC4Q2M389 1173 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 KIF4BQ2VIQ3 1234 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 CSRNP1Q96S65 589 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 EYA3Q99504 573 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 MIS18AQ9NYP9 233 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
PDPN-205ENST00000487038 CENPFP49454 3210 aa10.11□□□□□ -0.79
PDPN-205ENST00000487038 EIF4A1P60842 406 aaKnown RBP10.1□□□□□ -0.79
PDPN-205ENST00000487038 FKBP1BP68106 108 aa10.1□□□□□ -0.79
PDPN-205ENST00000487038 RASAL3Q86YV0 1011 aa10.1□□□□□ -0.79
PDPN-205ENST00000487038 DBNDD1Q9H9R9 158 aa10.1□□□□□ -0.79
PDPN-205ENST00000487038 GGA3Q9NZ52 723 aa10.1□□□□□ -0.79
PDPN-205ENST00000487038 MKI67P46013 3256 aaKnown RBP10.1□□□□□ -0.79
PDPN-205ENST00000487038 SH3TC1Q8TE82 1336 aa10.09□□□□□ -0.79
PDPN-205ENST00000487038 ZNF609O15014 1411 aa10.09□□□□□ -0.79
PDPN-205ENST00000487038 ECE2O60344 883 aa10.09□□□□□ -0.79
PDPN-205ENST00000487038 RBM26Q5T8P6 1007 aaKnown RBP10.09□□□□□ -0.79
PDPN-205ENST00000487038 CDCA5Q96FF9 252 aa10.09□□□□□ -0.79
PDPN-205ENST00000487038 PCGF6Q9BYE7 350 aa10.09□□□□□ -0.79
PDPN-205ENST00000487038 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
PDPN-205ENST00000487038 ECM29Q5VYK3 1845 aa10.08□□□□□ -0.8
PDPN-205ENST00000487038 BRCA2P51587 3418 aa10.08□□□□□ -0.8
PDPN-205ENST00000487038 C6orf229H3BNL8 230 aa10.08□□□□□ -0.8
PDPN-205ENST00000487038 FBXO46Q6PJ61 603 aaPredicted RBP10.08□□□□□ -0.8
PDPN-205ENST00000487038 DLK2Q6UY11 383 aa10.08□□□□□ -0.8
PDPN-205ENST00000487038 ZNF296Q8WUU4 475 aaPredicted RBP10.08□□□□□ -0.8
PDPN-205ENST00000487038 TRMT112Q9UI30 125 aaKnown RBP10.08□□□□□ -0.8
PDPN-205ENST00000487038 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 G3V3G9 751 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 RIMBP2O15034 1052 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 EGFRP00533 1210 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 HCLS1P14317 486 aaPredicted RBP10.07□□□□□ -0.8
PDPN-205ENST00000487038 SREBF2Q12772 1141 aa10.07□□□□□ -0.8
PDPN-205ENST00000487038 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
PDPN-205ENST00000487038 DCAF8Q5TAQ9 597 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms