RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
PTCD2-204ENST00000486995 CPDO75976 1380 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 PKD1L3Q7Z443 1732 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 USPL1Q5W0Q7 1092 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 TCEANC2Q96MN5 208 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 NBPF26B4DH59 902 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 NBPF14Q5TI25 921 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 NBPF10Q6P3W6 841 aaKnown RBP14.72□□□□□ -0.05
PTCD2-204ENST00000486995 NBPF15Q8N660 670 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 HMG20BQ9P0W2 317 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 STRCP1A6NGW2 1772 aa14.72□□□□□ -0.05
PTCD2-204ENST00000486995 GLI3P10071 1580 aa14.71□□□□□ -0.05
PTCD2-204ENST00000486995 TOB2Q14106 344 aaPredicted RBP14.71□□□□□ -0.05
PTCD2-204ENST00000486995 DBNDD2Q9BQY9 259 aa14.71□□□□□ -0.05
PTCD2-204ENST00000486995 ANKRD1Q15327 319 aa14.71□□□□□ -0.06
PTCD2-204ENST00000486995 LMBR1LQ6UX01 489 aa14.71□□□□□ -0.06
PTCD2-204ENST00000486995 VPS37CA5D8V6 355 aaPredicted RBP14.7□□□□□ -0.06
PTCD2-204ENST00000486995 H7C1W4 665 aa14.7□□□□□ -0.06
PTCD2-204ENST00000486995 CHGBP05060 677 aa14.7□□□□□ -0.06
PTCD2-204ENST00000486995 FOXO4P98177 505 aa14.7□□□□□ -0.06
PTCD2-204ENST00000486995 TPRNQ4KMQ1 711 aa14.7□□□□□ -0.06
PTCD2-204ENST00000486995 LARP1BQ659C4 914 aaKnown RBP14.7□□□□□ -0.06
PTCD2-204ENST00000486995 ARFGEF2Q9Y6D5 1785 aa14.7□□□□□ -0.06
PTCD2-204ENST00000486995 LETM1O95202 739 aaPredicted RBP14.7□□□□□ -0.06
PTCD2-204ENST00000486995 HAUS7Q99871 368 aa14.7□□□□□ -0.06
PTCD2-204ENST00000486995 FAM184AQ8NB25 1140 aa14.69□□□□□ -0.06
PTCD2-204ENST00000486995 ZKSCAN5Q9Y2L8 839 aa14.69□□□□□ -0.06
PTCD2-204ENST00000486995 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
PTCD2-204ENST00000486995 ZNF500O60304 480 aaPredicted RBP14.69□□□□□ -0.06
PTCD2-204ENST00000486995 OFD1O75665 1012 aa14.69□□□□□ -0.06
PTCD2-204ENST00000486995 CSPP1Q1MSJ5 1256 aa14.69□□□□□ -0.06
PTCD2-204ENST00000486995 DNAJC2Q99543 621 aaKnown RBP14.69□□□□□ -0.06
PTCD2-204ENST00000486995 RFX7Q2KHR2 1363 aa14.69□□□□□ -0.06
PTCD2-204ENST00000486995 ZNF609O15014 1411 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 PDIA4P13667 645 aaKnown RBP14.68□□□□□ -0.06
PTCD2-204ENST00000486995 UVSSAQ2YD98 709 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 TTLL7Q6ZT98 887 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 CDC37L1Q7L3B6 337 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 SEC62Q99442 399 aaKnown RBP14.68□□□□□ -0.06
PTCD2-204ENST00000486995 CCDC39Q9UFE4 941 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 CCDC129Q6ZRS4 1044 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 ATG9AQ7Z3C6 839 aa14.68□□□□□ -0.06
PTCD2-204ENST00000486995 KRT32Q14532 448 aa14.67□□□□□ -0.06
PTCD2-204ENST00000486995 MCMDC2Q4G0Z9 681 aa14.67□□□□□ -0.06
PTCD2-204ENST00000486995 ZCRB1Q8TBF4 217 aaKnown RBP14.67□□□□□ -0.06
PTCD2-204ENST00000486995 PDCP20941 246 aa14.67□□□□□ -0.06
PTCD2-204ENST00000486995 MCM5P33992 734 aa14.67□□□□□ -0.06
PTCD2-204ENST00000486995 DDX46Q7L014 1031 aaKnown RBP14.67□□□□□ -0.06
PTCD2-204ENST00000486995 FUCA2Q9BTY2 467 aa14.67□□□□□ -0.06
PTCD2-204ENST00000486995 NEK1Q96PY6 1258 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 CWC25Q9NXE8 425 aaPredicted RBP14.66□□□□□ -0.06
PTCD2-204ENST00000486995 CHMP3Q9Y3E7 222 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 WDR17Q8IZU2 1322 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 ERVV-2B6SEH9 535 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 A1BGP04217 495 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 CYP21A2P08686 494 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 FERMT3Q86UX7 667 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
PTCD2-204ENST00000486995 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
PTCD2-204ENST00000486995 PARP4Q9UKK3 1724 aaKnown RBP14.66□□□□□ -0.06
PTCD2-204ENST00000486995 HCLS1P14317 486 aaPredicted RBP14.65□□□□□ -0.06
PTCD2-204ENST00000486995 STK3Q13188 491 aa14.65□□□□□ -0.06
PTCD2-204ENST00000486995 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
PTCD2-204ENST00000486995 TTC6Q86TZ1 520 aa14.65□□□□□ -0.06
PTCD2-204ENST00000486995 FAM173BQ6P4H8 233 aa14.65□□□□□ -0.06
PTCD2-204ENST00000486995 TOM1L2Q6ZVM7 507 aa14.65□□□□□ -0.06
PTCD2-204ENST00000486995 BRINP3Q76B58 766 aa14.65□□□□□ -0.06
PTCD2-204ENST00000486995 CCDC9Q9Y3X0 531 aaKnown RBP14.65□□□□□ -0.06
PTCD2-204ENST00000486995 TIMM10P62072 90 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 KRT85P78386 507 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 NKX1-1Q15270 411 aaPredicted RBP14.64□□□□□ -0.07
PTCD2-204ENST00000486995 NEUROD6Q96NK8 337 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 GPR108Q9NPR9 543 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 PRDM11Q9NQV5 511 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.64□□□□□ -0.07
PTCD2-204ENST00000486995 UBE2Q2Q8WVN8 375 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 GTF3C6Q969F1 213 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 SH3TC1Q8TE82 1336 aa14.64□□□□□ -0.07
PTCD2-204ENST00000486995 IL15P40933 162 aaPredicted RBP14.63□□□□□ -0.07
PTCD2-204ENST00000486995 Q6ZUG5 572 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 CCDC191Q8NCU4 936 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 ZBTB3Q9H5J0 574 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 USP25Q9UHP3 1055 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 ELP1O95163 1332 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 SLFNL1Q499Z3 407 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 PAG1Q9NWQ8 432 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 KCPQ6ZWJ8 1503 aa14.63□□□□□ -0.07
PTCD2-204ENST00000486995 GOLIM4O00461 696 aa14.62□□□□□ -0.07
PTCD2-204ENST00000486995 JAK2O60674 1132 aa14.62□□□□□ -0.07
PTCD2-204ENST00000486995 LRRC24Q50LG9 513 aa14.62□□□□□ -0.07
PTCD2-204ENST00000486995 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
PTCD2-204ENST00000486995 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
PTCD2-204ENST00000486995 EYA2O00167 538 aa14.62□□□□□ -0.07
PTCD2-204ENST00000486995 ZNF594Q96JF6 807 aaPredicted RBP14.62□□□□□ -0.07
PTCD2-204ENST00000486995 HELLSQ9NRZ9 838 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms