RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 CENPBP07199 599 aaPredicted RBP19.79■□□□□ 0.76
SEMA4D-219ENST00000486935 GRAPQ13588 217 aa19.79■□□□□ 0.76
SEMA4D-219ENST00000486935 EAPPQ56P03 285 aaPredicted RBP19.79■□□□□ 0.76
SEMA4D-219ENST00000486935 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
SEMA4D-219ENST00000486935 GPC2Q8N158 579 aa19.79■□□□□ 0.76
SEMA4D-219ENST00000486935 GRAPLQ8TC17 118 aaPredicted RBP19.79■□□□□ 0.76
SEMA4D-219ENST00000486935 PPIP5K2O43314 1243 aa19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 TRIM28Q13263 835 aaKnown RBP19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 DPP8Q6V1X1 898 aaPredicted RBP19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 LDHDQ86WU2 507 aa19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 NIM1KQ8IY84 436 aa19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 MYD88Q99836 296 aa19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 CHMP4AQ9BY43 222 aa19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 CLEC11AQ9Y240 323 aa19.78■□□□□ 0.76
SEMA4D-219ENST00000486935 EPHX2P34913 555 aa19.77■□□□□ 0.76
SEMA4D-219ENST00000486935 AOC3Q16853 763 aa19.77■□□□□ 0.76
SEMA4D-219ENST00000486935 TRMT2AQ8IZ69 625 aaKnown RBP19.77■□□□□ 0.76
SEMA4D-219ENST00000486935 MPNDQ8N594 471 aa19.77■□□□□ 0.76
SEMA4D-219ENST00000486935 SUPT20HQ8NEM7 779 aa19.77■□□□□ 0.76
SEMA4D-219ENST00000486935 IRS4O14654 1257 aaPredicted RBP19.76■□□□□ 0.75
SEMA4D-219ENST00000486935 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
SEMA4D-219ENST00000486935 DDX58O95786 925 aaKnown RBP19.75■□□□□ 0.75
SEMA4D-219ENST00000486935 SF3B3Q15393 1217 aaKnown RBP19.75■□□□□ 0.75
SEMA4D-219ENST00000486935 PNMA8AQ86V59 439 aaPredicted RBP19.75■□□□□ 0.75
SEMA4D-219ENST00000486935 RTFDC1Q9BY42 306 aaPredicted RBP19.75■□□□□ 0.75
SEMA4D-219ENST00000486935 ZBTB38Q8NAP3 1195 aaPredicted RBP19.74■□□□□ 0.75
SEMA4D-219ENST00000486935 COL4A5P29400 1685 aa19.74■□□□□ 0.75
SEMA4D-219ENST00000486935 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 EXOSC9Q06265 439 aaKnown RBP19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 TMC4Q7Z404 712 aa19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 JMYQ8N9B5 988 aa19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 CELF1Q92879 486 aaKnown RBP19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 ZNRF3Q9ULT6 936 aa19.73■□□□□ 0.75
SEMA4D-219ENST00000486935 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
SEMA4D-219ENST00000486935 CCDC191Q8NCU4 936 aa19.72■□□□□ 0.75
SEMA4D-219ENST00000486935 METTL22Q9BUU2 404 aaPredicted RBP19.72■□□□□ 0.75
SEMA4D-219ENST00000486935 CWC25Q9NXE8 425 aaPredicted RBP19.72■□□□□ 0.75
SEMA4D-219ENST00000486935 MAP3K2Q9Y2U5 619 aa19.72■□□□□ 0.75
SEMA4D-219ENST00000486935 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
SEMA4D-219ENST00000486935 EPS15P42566 896 aa19.71■□□□□ 0.75
SEMA4D-219ENST00000486935 NSFL1CQ9UNZ2 370 aaKnown RBP19.71■□□□□ 0.75
SEMA4D-219ENST00000486935 PI4KAP2A4QPH2 592 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 ITGBL1O95965 494 aaPredicted RBP19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 HSP90B1P14625 803 aaKnown RBP19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 SCNN1DP51172 638 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 CXCL9Q07325 125 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 KSR2Q6VAB6 950 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 PI4KAP1Q8N8J0 262 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 CREBZFQ9NS37 354 aa19.7■□□□□ 0.74
SEMA4D-219ENST00000486935 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
SEMA4D-219ENST00000486935 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
SEMA4D-219ENST00000486935 RPS8P62241 208 aaKnown RBP19.69■□□□□ 0.74
SEMA4D-219ENST00000486935 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
SEMA4D-219ENST00000486935 PASKQ96RG2 1323 aa19.69■□□□□ 0.74
SEMA4D-219ENST00000486935 C6orf229H3BNL8 230 aa19.68■□□□□ 0.74
SEMA4D-219ENST00000486935 RAD17O75943 681 aa19.68■□□□□ 0.74
SEMA4D-219ENST00000486935 GPSM2P81274 684 aa19.68■□□□□ 0.74
SEMA4D-219ENST00000486935 G2E3Q7L622 706 aa19.68■□□□□ 0.74
SEMA4D-219ENST00000486935 SEC31BQ9NQW1 1179 aa19.68■□□□□ 0.74
SEMA4D-219ENST00000486935 SCN4AP35499 1836 aa19.67■□□□□ 0.74
SEMA4D-219ENST00000486935 RIMBP2O15034 1052 aa19.67■□□□□ 0.74
SEMA4D-219ENST00000486935 PDE8AO60658 829 aa19.67■□□□□ 0.74
SEMA4D-219ENST00000486935 WASHC4Q2M389 1173 aa19.67■□□□□ 0.74
SEMA4D-219ENST00000486935 CCDC85AQ96PX6 553 aaPredicted RBP19.67■□□□□ 0.74
SEMA4D-219ENST00000486935 MKRN1Q9UHC7 482 aaKnown RBP19.67■□□□□ 0.74
SEMA4D-219ENST00000486935 LAMB2P55268 1798 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 IGKV5-2P06315 115 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 GMPSP49915 693 aaPredicted RBP19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 NEXNQ0ZGT2 675 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 TNIP1Q15025 636 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 CCDC152Q4G0S7 254 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 CIAPIN1Q6FI81 312 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 GPRC5DQ9NZD1 345 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 POLLQ9UGP5 575 aa19.66■□□□□ 0.74
SEMA4D-219ENST00000486935 TMEM88BA6NKF7 163 aa19.65■□□□□ 0.74
SEMA4D-219ENST00000486935 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
SEMA4D-219ENST00000486935 BCL2L13Q9BXK5 485 aa19.65■□□□□ 0.74
SEMA4D-219ENST00000486935 YDJCA8MPS7 323 aa19.64■□□□□ 0.73
SEMA4D-219ENST00000486935 CWF19L2Q2TBE0 894 aaKnown RBP19.64■□□□□ 0.73
SEMA4D-219ENST00000486935 ADARB2Q9NS39 739 aaKnown RBP19.64■□□□□ 0.73
SEMA4D-219ENST00000486935 CACNA1FO60840 1977 aa19.64■□□□□ 0.73
SEMA4D-219ENST00000486935 DDX60Q8IY21 1712 aaKnown RBP19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 VAMP4O75379 141 aa19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 IFFO2Q5TF58 517 aa19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 TBC1D16Q8TBP0 767 aa19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 GPR101Q96P66 508 aaPredicted RBP19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 EYA3Q99504 573 aa19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 DBNDD1Q9H9R9 158 aa19.63■□□□□ 0.73
SEMA4D-219ENST00000486935 NEURL1BA8MQ27 555 aa19.62■□□□□ 0.73
SEMA4D-219ENST00000486935 FLIIQ13045 1269 aa19.62■□□□□ 0.73
SEMA4D-219ENST00000486935 DOK7Q18PE1 504 aa19.62■□□□□ 0.73
SEMA4D-219ENST00000486935 ANKIB1Q9P2G1 1089 aa19.62■□□□□ 0.73
SEMA4D-219ENST00000486935 RCAN3Q9UKA8 241 aa19.62■□□□□ 0.73
SEMA4D-219ENST00000486935 TAF1P21675 1872 aa19.61■□□□□ 0.73
SEMA4D-219ENST00000486935 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
SEMA4D-219ENST00000486935 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms