RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 CCDC129Q6ZRS4 1044 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 BIN1O00499 593 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 LARGE1O95461 756 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 ME1P48163 572 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 EIF4A1P60842 406 aaKnown RBP14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 HSP90AB3PQ58FF7 597 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 NGLY1Q96IV0 654 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 TBX22Q9Y458 520 aa14.5□□□□□ -0.09
SHROOM3-208ENST00000486758 GRM8O00222 908 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 KINO60870 393 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 PTH1RQ03431 593 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 ERC1Q8IUD2 1116 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 CREBRFQ8IUR6 639 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 KIAA1524Q8TCG1 905 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 CHMP4CQ96CF2 233 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 MAP2P11137 1827 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 KIF20AO95235 890 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 SKILP12757 684 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 TCHHQ07283 1943 aa14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
SHROOM3-208ENST00000486758 ANAPC15P60006 121 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 HAND2P61296 217 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 CBX8Q9HC52 389 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 PRDM11Q9NQV5 511 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 KIAA0232Q92628 1395 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 PDCP20941 246 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 PSMA5P28066 241 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 ELF2Q15723 593 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 CDC37L1Q7L3B6 337 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 IP6K1Q92551 441 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 FER1L4A9Z1Z3 1794 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 GOLIM4O00461 696 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 RUFY3Q7L099 469 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 SUCLG2Q96I99 432 aa14.48□□□□□ -0.09
SHROOM3-208ENST00000486758 ADCK5Q3MIX3 580 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 KSR2Q6VAB6 950 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 ADAMTSL3P82987 1691 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 GOLGB1Q14789 3259 aaKnown RBP14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 KRT222Q8N1A0 295 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 TLR7Q9NYK1 1049 aaKnown RBP14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 RNMTO43148 476 aaKnown RBP14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 ARID5BQ14865 1188 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 AKAP4Q5JQC9 854 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 OGFRQ9NZT2 677 aa14.47□□□□□ -0.09
SHROOM3-208ENST00000486758 ATP10DQ9P241 1426 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 SGSM2O43147 1006 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 AP5Z1O43299 807 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 ATP2B1P20020 1258 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 CUL4AQ13619 759 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 LARP1Q6PKG0 1096 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 IFT172Q9UG01 1749 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 CPLX1O14810 134 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 HSP90AA4PQ58FG1 418 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 ANKRD13DQ6ZTN6 518 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 TTC6Q86TZ1 520 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 KCNF1Q9H3M0 494 aa14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 ZNF215Q9UL58 517 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-208ENST00000486758 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.1
SHROOM3-208ENST00000486758 PDILTQ8N807 584 aa14.46□□□□□ -0.1
SHROOM3-208ENST00000486758 KIF18AQ8NI77 898 aa14.46□□□□□ -0.1
SHROOM3-208ENST00000486758 MYO5BQ9ULV0 1848 aa14.46□□□□□ -0.1
SHROOM3-208ENST00000486758 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 GPTP24298 496 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 SF3B2Q13435 895 aaKnown RBP14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 TTLL5Q6EMB2 1281 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 C8orf37Q96NL8 207 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 MED14O60244 1454 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 LMBR1LQ6UX01 489 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 HYPKQ9NX55 129 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 SMTNL1A8MU46 457 aa14.45□□□□□ -0.1
SHROOM3-208ENST00000486758 TIMM10P62072 90 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 SSH3Q8TE77 659 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 BRF1Q92994 677 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 EVI5LQ96CN4 794 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 SEC62Q99442 399 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 HSPA4P34932 840 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 NCBP1Q09161 790 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 UTP14CQ5TAP6 766 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 DHX37Q8IY37 1157 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 ZSWIM4Q9H7M6 989 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 URI1O94763 535 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 TPM4P67936 248 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 TFCP2Q12800 502 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 BEND3Q5T5X7 828 aa14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 SCAND2PQ9GZW5 306 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-208ENST00000486758 ZSCAN25Q6NSZ9 544 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 ZSCAN31Q96LW9 406 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 MTMR6Q9Y217 621 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 ARHGEF10O15013 1369 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 CCDC69A6NI79 296 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 ME3Q16798 604 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 TEX35Q5T0J7 233 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 CREB3L3Q68CJ9 461 aa14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 ZNF496Q96IT1 587 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 CLTCQ00610 1675 aaKnown RBP14.43□□□□□ -0.1
SHROOM3-208ENST00000486758 SLFNL1Q499Z3 407 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms