RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 GJA5P36382 358 aa8.47□□□□□ -1.05
NECTIN3-208ENST00000486596 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
NECTIN3-208ENST00000486596 IP6K1Q92551 441 aa8.47□□□□□ -1.05
NECTIN3-208ENST00000486596 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
NECTIN3-208ENST00000486596 TFCP2L1Q9NZI6 479 aa8.47□□□□□ -1.05
NECTIN3-208ENST00000486596 MAP3K19Q56UN5 1328 aa8.47□□□□□ -1.05
NECTIN3-208ENST00000486596 SIAH2O43255 324 aa8.46□□□□□ -1.06
NECTIN3-208ENST00000486596 HOXC9P31274 260 aa8.46□□□□□ -1.06
NECTIN3-208ENST00000486596 PTPRNQ16849 979 aa8.46□□□□□ -1.06
NECTIN3-208ENST00000486596 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
NECTIN3-208ENST00000486596 RGPD2P0DJD1 1756 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 SPDYE5A6NIY4 337 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 SPTLC1O15269 473 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 CCNYL3P0C7X3 344 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 COL23A1Q86Y22 540 aaPredicted RBP8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 KDM4CQ9H3R0 1056 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 TERF2IPQ9NYB0 399 aa8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
NECTIN3-208ENST00000486596 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
NECTIN3-208ENST00000486596 HPS1Q92902 700 aa8.44□□□□□ -1.06
NECTIN3-208ENST00000486596 ATP13A2Q9NQ11 1180 aa8.44□□□□□ -1.06
NECTIN3-208ENST00000486596 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
NECTIN3-208ENST00000486596 ATP10DQ9P241 1426 aa8.44□□□□□ -1.06
NECTIN3-208ENST00000486596 C5P01031 1676 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 AMPHP49418 695 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 USHBP1Q8N6Y0 703 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 COG3Q96JB2 828 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 TESK2Q96S53 571 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 USP47Q96K76 1375 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 TOGARAM1Q9Y4F4 1720 aa8.43□□□□□ -1.06
NECTIN3-208ENST00000486596 CTHP32929 405 aa8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 SH3BP2P78314 561 aa8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 RRS1Q15050 365 aaKnown RBP8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 AMIGO3Q86WK7 504 aa8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 RTL1A6NKG5 1358 aa8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 ADCY9O60503 1353 aa8.42□□□□□ -1.06
NECTIN3-208ENST00000486596 PALLDQ8WX93 1383 aa8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 GRIN3BO60391 1043 aa8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 KCNH2Q12809 1159 aa8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
NECTIN3-208ENST00000486596 ST20-MTHFSA0A0A6YYL1 179 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 ALDH1A1P00352 501 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 QPCTQ16769 361 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 SMIM5Q71RC9 77 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 FAM117AQ9C073 453 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.06
NECTIN3-208ENST00000486596 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
NECTIN3-208ENST00000486596 CEP350Q5VT06 3117 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 TONSLQ96HA7 1378 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 PCDH11XQ9BZA7 1347 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 PCDH11YQ9BZA8 1340 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 TAF1LQ8IZX4 1826 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 FYB1O15117 783 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 NEUROD2Q15784 382 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 HSP90AB2PQ58FF8 381 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 MPRIPQ6WCQ1 1025 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 RAPGEF4Q8WZA2 1011 aa8.39□□□□□ -1.07
NECTIN3-208ENST00000486596 SMG6Q86US8 1419 aaKnown RBP8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 CGNL1Q0VF96 1302 aa8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 KAT6BQ8WYB5 2073 aa8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 CYP27B1O15528 508 aa8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 MPNDQ8N594 471 aa8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 ZNF526Q8TF50 670 aaPredicted RBP8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 DDRGK1Q96HY6 314 aa8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 CD2APQ9Y5K6 639 aa8.38□□□□□ -1.07
NECTIN3-208ENST00000486596 PKD1L3Q7Z443 1732 aa8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 INSRP06213 1382 aa8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 IGSF1Q8N6C5 1336 aa8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 NFX1Q12986 1120 aaKnown RBP8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 LYPD8Q6UX82 237 aa8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 BAP1Q92560 729 aa8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
NECTIN3-208ENST00000486596 FLT4P35916 1363 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 UBR3Q6ZT12 1888 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 WFS1O76024 890 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 FLAD1Q8NFF5 587 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 HELBQ8NG08 1087 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms