RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
SLX4-203ENST00000486524 SEC62Q99442 399 aaKnown RBP13.49□□□□□ -0.25
SLX4-203ENST00000486524 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
SLX4-203ENST00000486524 ATP5JP18859 108 aa13.49□□□□□ -0.25
SLX4-203ENST00000486524 SYT1P21579 422 aa13.49□□□□□ -0.25
SLX4-203ENST00000486524 TIMM10P62072 90 aa13.49□□□□□ -0.25
SLX4-203ENST00000486524 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
SLX4-203ENST00000486524 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 LAMB4A4D0S4 1761 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 STX6O43752 255 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 GJB2P29033 226 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 ZNF445P59923 1031 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 ME3Q16798 604 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
SLX4-203ENST00000486524 CNPY2Q9Y2B0 182 aa13.48□□□□□ -0.25
SLX4-203ENST00000486524 STRCQ7RTU9 1775 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 TCHHQ07283 1943 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
SLX4-203ENST00000486524 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 KCPQ6ZWJ8 1503 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 MED23Q9ULK4 1368 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
SLX4-203ENST00000486524 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 TM6SF1Q9BZW5 370 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
SLX4-203ENST00000486524 GOLIM4O00461 696 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
SLX4-203ENST00000486524 KCNB2Q92953 911 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 TAF5LO75529 589 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 MBD3O95983 291 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 PSMA5P28066 241 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 STK3Q13188 491 aa13.46□□□□□ -0.25
SLX4-203ENST00000486524 PUS3Q9BZE2 481 aaKnown RBP13.46□□□□□ -0.25
SLX4-203ENST00000486524 COL15A1P39059 1388 aa13.46□□□□□ -0.26
SLX4-203ENST00000486524 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
SLX4-203ENST00000486524 ST3GAL1Q11201 340 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 PIGBQ92521 554 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 SYTL4Q96C24 671 aaPredicted RBP13.45□□□□□ -0.26
SLX4-203ENST00000486524 HAUS7Q99871 368 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 FIBPO43427 364 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 FAM89AQ96GI7 184 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 ZMYND15Q9H091 742 aa13.45□□□□□ -0.26
SLX4-203ENST00000486524 ZNF609O15014 1411 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 A0A0G2JS52 829 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SLX4-203ENST00000486524 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
SLX4-203ENST00000486524 SNRKQ9NRH2 765 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 F13A1P00488 732 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 UBR2Q8IWV8 1755 aa13.44□□□□□ -0.26
SLX4-203ENST00000486524 RPS6KB1P23443 525 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 GPTP24298 496 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 EYA2O00167 538 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
SLX4-203ENST00000486524 MCMDC2Q4G0Z9 681 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 LRSAM1Q6UWE0 723 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 ABCA3Q99758 1704 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 SHANK3Q9BYB0 1731 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 A0A1B0GUL7 405 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
SLX4-203ENST00000486524 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 FERMT3Q86UX7 667 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 LRRC2Q9BYS8 371 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 ATG3Q9NT62 314 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 MTMR6Q9Y217 621 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
SLX4-203ENST00000486524 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
SLX4-203ENST00000486524 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 KBTBD3Q8NAB2 608 aa13.42□□□□□ -0.26
SLX4-203ENST00000486524 TNS2Q63HR2 1409 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLX4-203ENST00000486524 LARP1BQ659C4 914 aaKnown RBP13.41□□□□□ -0.26
SLX4-203ENST00000486524 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 TJP1Q07157 1748 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
SLX4-203ENST00000486524 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 ESPNB1AK53 854 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 CYP21A2P08686 494 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
SLX4-203ENST00000486524 HLFQ16534 295 aa13.41□□□□□ -0.26
SLX4-203ENST00000486524 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms