RNA–Protein interactions for RNA: ENST00000486018.1

TPM2-206, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 699 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-206ENST00000486018 PDE8AO60658 829 aa19.74■□□□□ 0.75
TPM2-206ENST00000486018 ITPRIPQ8IWB1 547 aa19.74■□□□□ 0.75
TPM2-206ENST00000486018 SUCLG2Q96I99 432 aa19.74■□□□□ 0.75
TPM2-206ENST00000486018 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
TPM2-206ENST00000486018 COG6Q9Y2V7 657 aa19.74■□□□□ 0.75
TPM2-206ENST00000486018 COL11A2P13942 1736 aaPredicted RBP19.73■□□□□ 0.75
TPM2-206ENST00000486018 NPHP1O15259 732 aa19.73■□□□□ 0.75
TPM2-206ENST00000486018 CSF1RP07333 972 aa19.73■□□□□ 0.75
TPM2-206ENST00000486018 SRGNP10124 158 aa19.73■□□□□ 0.75
TPM2-206ENST00000486018 HSP90B1P14625 803 aaKnown RBP19.73■□□□□ 0.75
TPM2-206ENST00000486018 HSPA6P17066 643 aa19.73■□□□□ 0.75
TPM2-206ENST00000486018 CHRNA5P30532 468 aa19.73■□□□□ 0.75
TPM2-206ENST00000486018 HOXA10P31260 410 aaPredicted RBP19.73■□□□□ 0.75
TPM2-206ENST00000486018 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
TPM2-206ENST00000486018 GNAI3P08754 354 aa19.72■□□□□ 0.75
TPM2-206ENST00000486018 RABL6Q3YEC7 729 aaPredicted RBP19.72■□□□□ 0.75
TPM2-206ENST00000486018 TTLL11Q8NHH1 800 aa19.72■□□□□ 0.75
TPM2-206ENST00000486018 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
TPM2-206ENST00000486018 DLEC1Q9Y238 1755 aa19.72■□□□□ 0.75
TPM2-206ENST00000486018 RTL9Q8NET4 1388 aa19.71■□□□□ 0.75
TPM2-206ENST00000486018 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
TPM2-206ENST00000486018 CTSWP56202 376 aa19.71■□□□□ 0.75
TPM2-206ENST00000486018 ANKRD44Q8N8A2 993 aa19.71■□□□□ 0.75
TPM2-206ENST00000486018 DDX19BQ9UMR2 479 aa19.71■□□□□ 0.75
TPM2-206ENST00000486018 BRCA1P38398 1863 aaKnown RBP19.71■□□□□ 0.75
TPM2-206ENST00000486018 UBTFL1P0CB47 393 aaPredicted RBP19.7■□□□□ 0.74
TPM2-206ENST00000486018 C2CD5Q86YS7 1000 aa19.7■□□□□ 0.74
TPM2-206ENST00000486018 ZBTB40Q9NUA8 1239 aa19.7■□□□□ 0.74
TPM2-206ENST00000486018 MYH3P11055 1940 aa19.69■□□□□ 0.74
TPM2-206ENST00000486018 H0YIN7 160 aa19.69■□□□□ 0.74
TPM2-206ENST00000486018 NPR1P16066 1061 aa19.69■□□□□ 0.74
TPM2-206ENST00000486018 DALRD3Q5D0E6 543 aaKnown RBP19.69■□□□□ 0.74
TPM2-206ENST00000486018 C9orf131Q5VYM1 1079 aa19.69■□□□□ 0.74
TPM2-206ENST00000486018 STYK1Q6J9G0 422 aa19.69■□□□□ 0.74
TPM2-206ENST00000486018 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
TPM2-206ENST00000486018 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
TPM2-206ENST00000486018 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
TPM2-206ENST00000486018 CRAMP1Q96RY5 1269 aa19.68■□□□□ 0.74
TPM2-206ENST00000486018 LRRFIP2Q9Y608 721 aaKnown RBP19.68■□□□□ 0.74
TPM2-206ENST00000486018 COL4A1P02462 1669 aa19.68■□□□□ 0.74
TPM2-206ENST00000486018 GNAI2P04899 355 aa19.67■□□□□ 0.74
TPM2-206ENST00000486018 MTX1Q13505 466 aa19.67■□□□□ 0.74
TPM2-206ENST00000486018 CCDC152Q4G0S7 254 aa19.67■□□□□ 0.74
TPM2-206ENST00000486018 IFFO2Q5TF58 517 aa19.67■□□□□ 0.74
TPM2-206ENST00000486018 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
TPM2-206ENST00000486018 LMBR1LQ6UX01 489 aa19.66■□□□□ 0.74
TPM2-206ENST00000486018 CRBNQ96SW2 442 aa19.66■□□□□ 0.74
TPM2-206ENST00000486018 GREM2Q9H772 168 aa19.66■□□□□ 0.74
TPM2-206ENST00000486018 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
TPM2-206ENST00000486018 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
TPM2-206ENST00000486018 SEC31BQ9NQW1 1179 aa19.65■□□□□ 0.74
TPM2-206ENST00000486018 FAM161AQ3B820 660 aa19.64■□□□□ 0.73
TPM2-206ENST00000486018 RPGRQ92834 1020 aaKnown RBP19.64■□□□□ 0.73
TPM2-206ENST00000486018 RBM17Q96I25 401 aaKnown RBP19.64■□□□□ 0.73
TPM2-206ENST00000486018 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
TPM2-206ENST00000486018 RFX5P48382 616 aaPredicted RBP19.63■□□□□ 0.73
TPM2-206ENST00000486018 C7orf43Q8WVR3 580 aa19.63■□□□□ 0.73
TPM2-206ENST00000486018 CNKSR1Q969H4 720 aa19.63■□□□□ 0.73
TPM2-206ENST00000486018 TOMM70O94826 608 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 ITGA6P23229 1130 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 GRAPQ13588 217 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 DDX46Q7L014 1031 aaKnown RBP19.62■□□□□ 0.73
TPM2-206ENST00000486018 TTLL6Q8N841 843 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 GRAPLQ8TC17 118 aaPredicted RBP19.62■□□□□ 0.73
TPM2-206ENST00000486018 CELF1Q92879 486 aaKnown RBP19.62■□□□□ 0.73
TPM2-206ENST00000486018 ZNF622Q969S3 477 aaKnown RBP eCLIP19.62■□□□□ 0.732e-6■■□□□ 12.4
TPM2-206ENST00000486018 CCDC85AQ96PX6 553 aaPredicted RBP19.62■□□□□ 0.73
TPM2-206ENST00000486018 C1orf115Q9H7X2 142 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 RNF181Q9P0P0 153 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 TAF1P21675 1872 aa19.62■□□□□ 0.73
TPM2-206ENST00000486018 SLX4Q8IY92 1834 aa19.61■□□□□ 0.73
TPM2-206ENST00000486018 PRPF40BQ6NWY9 871 aaKnown RBP19.61■□□□□ 0.73
TPM2-206ENST00000486018 BBOX1O75936 387 aa19.6■□□□□ 0.73
TPM2-206ENST00000486018 RPS8P62241 208 aaKnown RBP19.6■□□□□ 0.73
TPM2-206ENST00000486018 ATP8B2P98198 1209 aa19.6■□□□□ 0.73
TPM2-206ENST00000486018 IFIT5Q13325 482 aaKnown RBP19.6■□□□□ 0.73
TPM2-206ENST00000486018 AAMPQ13685 434 aa19.6■□□□□ 0.73
TPM2-206ENST00000486018 POLA2Q14181 598 aa19.6■□□□□ 0.73
TPM2-206ENST00000486018 CEP85Q6P2H3 762 aa19.6■□□□□ 0.73
TPM2-206ENST00000486018 SNED1Q8TER0 1413 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 ANKRD18BA2A2Z9 1011 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 PRELPP51888 382 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 RASSF7Q02833 373 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 SIRT2Q8IXJ6 389 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 EXOC6Q8TAG9 804 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 SSH3Q8TE77 659 aa19.59■□□□□ 0.73
TPM2-206ENST00000486018 PNMA6EA0A0J9YXQ4 647 aa19.58■□□□□ 0.72
TPM2-206ENST00000486018 CCDC57Q2TAC2 916 aa19.58■□□□□ 0.72
TPM2-206ENST00000486018 TMC4Q7Z404 712 aa19.58■□□□□ 0.72
TPM2-206ENST00000486018 CDC5LQ99459 802 aaKnown RBP19.58■□□□□ 0.72
TPM2-206ENST00000486018 RRAGCQ9HB90 399 aa19.58■□□□□ 0.72
TPM2-206ENST00000486018 LRRC37AA6NMS7 1700 aa19.57■□□□□ 0.72
TPM2-206ENST00000486018 SBF1O95248 1867 aa19.57■□□□□ 0.72
TPM2-206ENST00000486018 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
TPM2-206ENST00000486018 SLC51AQ86UW1 340 aa19.57■□□□□ 0.72
TPM2-206ENST00000486018 RPAP2Q8IXW5 612 aaPredicted RBP19.57■□□□□ 0.72
TPM2-206ENST00000486018 COPRSQ9NQ92 184 aa19.57■□□□□ 0.72
TPM2-206ENST00000486018 BSDC1Q9NW68 430 aaPredicted RBP19.57■□□□□ 0.72
TPM2-206ENST00000486018 ATP6V0A2Q9Y487 856 aa19.57■□□□□ 0.72
TPM2-206ENST00000486018 PPEF1O14829 653 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms