RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 ABCC4O15439 1325 aa27.1■■□□□ 1.93
LMBR1-217ENST00000485985 HCLS1P14317 486 aaPredicted RBP27.09■■□□□ 1.93
LMBR1-217ENST00000485985 GNAI1P63096 354 aa27.09■■□□□ 1.93
LMBR1-217ENST00000485985 USP50Q70EL3 339 aaPredicted RBP27.09■■□□□ 1.93
LMBR1-217ENST00000485985 VPS33BQ9H267 617 aa27.09■■□□□ 1.93
LMBR1-217ENST00000485985 COL4A1P02462 1669 aa27.08■■□□□ 1.93
LMBR1-217ENST00000485985 AOC3Q16853 763 aa27.08■■□□□ 1.93
LMBR1-217ENST00000485985 TRMT112Q9UI30 125 aaKnown RBP27.08■■□□□ 1.93
LMBR1-217ENST00000485985 WDR33Q9C0J8 1336 aaKnown RBP27.08■■□□□ 1.93
LMBR1-217ENST00000485985 CALD1Q05682 793 aaKnown RBP27.07■■□□□ 1.92
LMBR1-217ENST00000485985 ANKRD13DQ6ZTN6 518 aa27.07■■□□□ 1.92
LMBR1-217ENST00000485985 HYPKQ9NX55 129 aa27.07■■□□□ 1.92
LMBR1-217ENST00000485985 SH3TC1Q8TE82 1336 aa27.07■■□□□ 1.92
LMBR1-217ENST00000485985 FMR1Q06787 632 aaKnown RBP eCLIP27.06■■□□□ 1.92
LMBR1-217ENST00000485985 ELL2O00472 640 aaPredicted RBP27.05■■□□□ 1.92
LMBR1-217ENST00000485985 BBOX1O75936 387 aa27.05■■□□□ 1.92
LMBR1-217ENST00000485985 LBX1P52954 281 aa27.05■■□□□ 1.92
LMBR1-217ENST00000485985 SUPT20HQ8NEM7 779 aa27.05■■□□□ 1.92
LMBR1-217ENST00000485985 ISCA1Q9BUE6 129 aa27.05■■□□□ 1.92
LMBR1-217ENST00000485985 RTFDC1Q9BY42 306 aaPredicted RBP27.05■■□□□ 1.92
LMBR1-217ENST00000485985 DUOX1Q9NRD9 1551 aa27.05■■□□□ 1.92
LMBR1-217ENST00000485985 MAP2K1Q02750 393 aaPredicted RBP27.04■■□□□ 1.92
LMBR1-217ENST00000485985 SP8Q8IXZ3 490 aa27.04■■□□□ 1.92
LMBR1-217ENST00000485985 C8orf58Q8NAV2 365 aa27.04■■□□□ 1.92
LMBR1-217ENST00000485985 GPRC5DQ9NZD1 345 aa27.04■■□□□ 1.92
LMBR1-217ENST00000485985 ZNRF3Q9ULT6 936 aa27.04■■□□□ 1.92
LMBR1-217ENST00000485985 ATP5J2-PTCD1G3V325 749 aa27.03■■□□□ 1.92
LMBR1-217ENST00000485985 CXCL9Q07325 125 aa27.03■■□□□ 1.92
LMBR1-217ENST00000485985 CST9Q5W186 159 aa27.02■■□□□ 1.92
LMBR1-217ENST00000485985 PHAXQ9H814 394 aaKnown RBP27.02■■□□□ 1.92
LMBR1-217ENST00000485985 ADARB2Q9NS39 739 aaKnown RBP27.02■■□□□ 1.92
LMBR1-217ENST00000485985 TRPM7Q96QT4 1865 aa27.02■■□□□ 1.92
LMBR1-217ENST00000485985 ZNF316A6NFI3 1004 aaPredicted RBP27.01■■□□□ 1.91
LMBR1-217ENST00000485985 TRAF5O00463 557 aa27.01■■□□□ 1.91
LMBR1-217ENST00000485985 HSPA8P11142 646 aaKnown RBP27.01■■□□□ 1.91
LMBR1-217ENST00000485985 DPP8Q6V1X1 898 aaPredicted RBP27.01■■□□□ 1.91
LMBR1-217ENST00000485985 MPNDQ8N594 471 aa27.01■■□□□ 1.91
LMBR1-217ENST00000485985 TSR2Q969E8 191 aaKnown RBP27■■□□□ 1.91
LMBR1-217ENST00000485985 FAM89AQ96GI7 184 aa27■■□□□ 1.91
LMBR1-217ENST00000485985 KIAA2012Q0VF49 1180 aa26.99■■□□□ 1.91
LMBR1-217ENST00000485985 DDX46Q7L014 1031 aaKnown RBP26.99■■□□□ 1.91
LMBR1-217ENST00000485985 TSPYL6Q8N831 410 aa26.99■■□□□ 1.91
LMBR1-217ENST00000485985 CAPNS2Q96L46 248 aa26.99■■□□□ 1.91
LMBR1-217ENST00000485985 ECE1P42892 770 aa26.98■■□□□ 1.91
LMBR1-217ENST00000485985 GMPSP49915 693 aaPredicted RBP26.98■■□□□ 1.91
LMBR1-217ENST00000485985 PAXIP1Q6ZW49 1069 aaPredicted RBP26.98■■□□□ 1.91
LMBR1-217ENST00000485985 MRS2Q9HD23 443 aa26.98■■□□□ 1.91
LMBR1-217ENST00000485985 MYH3P11055 1940 aa26.98■■□□□ 1.91
LMBR1-217ENST00000485985 GOLGA2Q08379 1002 aa26.97■■□□□ 1.91
LMBR1-217ENST00000485985 GRAPQ13588 217 aa26.97■■□□□ 1.91
LMBR1-217ENST00000485985 CCDC27Q2M243 656 aa26.97■■□□□ 1.91
LMBR1-217ENST00000485985 RTL5Q5HYW3 569 aaPredicted RBP26.97■■□□□ 1.91
LMBR1-217ENST00000485985 CIAPIN1Q6FI81 312 aa26.97■■□□□ 1.91
LMBR1-217ENST00000485985 GRAPLQ8TC17 118 aaPredicted RBP26.97■■□□□ 1.91
LMBR1-217ENST00000485985 TLL2Q9Y6L7 1015 aa26.97■■□□□ 1.91
LMBR1-217ENST00000485985 THSD7BQ9C0I4 1608 aa26.97■■□□□ 1.91
LMBR1-217ENST00000485985 CYP4F22Q6NT55 531 aa26.96■■□□□ 1.91
LMBR1-217ENST00000485985 RIC3Q7Z5B4 369 aa26.96■■□□□ 1.91
LMBR1-217ENST00000485985 WWC1Q8IX03 1113 aa26.96■■□□□ 1.91
LMBR1-217ENST00000485985 GPR101Q96P66 508 aaPredicted RBP26.96■■□□□ 1.91
LMBR1-217ENST00000485985 CACNA1FO60840 1977 aa26.96■■□□□ 1.91
LMBR1-217ENST00000485985 TRIM28Q13263 835 aaKnown RBP26.95■■□□□ 1.9
LMBR1-217ENST00000485985 CDHR2Q9BYE9 1310 aa26.94■■□□□ 1.9
LMBR1-217ENST00000485985 GRM1Q13255 1194 aa26.94■■□□□ 1.9
LMBR1-217ENST00000485985 TNIP1Q15025 636 aa26.94■■□□□ 1.9
LMBR1-217ENST00000485985 BCL2L13Q9BXK5 485 aa26.94■■□□□ 1.9
LMBR1-217ENST00000485985 PGAP2Q9UHJ9 254 aa26.94■■□□□ 1.9
LMBR1-217ENST00000485985 SPEF2Q9C093 1822 aa26.93■■□□□ 1.9
LMBR1-217ENST00000485985 ANP32CO43423 234 aa26.93■■□□□ 1.9
LMBR1-217ENST00000485985 RAD17O75943 681 aa26.93■■□□□ 1.9
LMBR1-217ENST00000485985 SF3B3Q15393 1217 aaKnown RBP26.93■■□□□ 1.9
LMBR1-217ENST00000485985 TMC4Q7Z404 712 aa26.93■■□□□ 1.9
LMBR1-217ENST00000485985 MYD88Q99836 296 aa26.93■■□□□ 1.9
LMBR1-217ENST00000485985 CCDC30Q5VVM6 783 aa26.92■■□□□ 1.9
LMBR1-217ENST00000485985 BEGAINQ9BUH8 593 aa26.92■■□□□ 1.9
LMBR1-217ENST00000485985 IRS4O14654 1257 aaPredicted RBP26.91■■□□□ 1.9
LMBR1-217ENST00000485985 HIRAP54198 1017 aaPredicted RBP26.91■■□□□ 1.9
LMBR1-217ENST00000485985 SAPCD2Q86UD0 394 aa26.91■■□□□ 1.9
LMBR1-217ENST00000485985 ZC3H15Q8WU90 426 aaKnown RBP26.91■■□□□ 1.9
LMBR1-217ENST00000485985 CELF1Q92879 486 aaKnown RBP26.91■■□□□ 1.9
LMBR1-217ENST00000485985 GLIS2Q9BZE0 524 aaPredicted RBP26.91■■□□□ 1.9
LMBR1-217ENST00000485985 YDJCA8MPS7 323 aa26.9■■□□□ 1.9
LMBR1-217ENST00000485985 CELF2O95319 508 aaKnown RBP26.9■■□□□ 1.9
LMBR1-217ENST00000485985 MAP2K2P36507 400 aa26.89■■□□□ 1.9
LMBR1-217ENST00000485985 ZBTB38Q8NAP3 1195 aaPredicted RBP26.89■■□□□ 1.9
LMBR1-217ENST00000485985 ABHD8Q96I13 439 aa26.89■■□□□ 1.9
LMBR1-217ENST00000485985 CNOT7Q9UIV1 285 aaKnown RBP26.89■■□□□ 1.9
LMBR1-217ENST00000485985 IL16Q14005 1332 aa26.89■■□□□ 1.89
LMBR1-217ENST00000485985 TRPM4Q8TD43 1214 aa26.88■■□□□ 1.89
LMBR1-217ENST00000485985 METTL22Q9BUU2 404 aaPredicted RBP26.88■■□□□ 1.89
LMBR1-217ENST00000485985 AOC2O75106 756 aa26.87■■□□□ 1.89
LMBR1-217ENST00000485985 NCBP3Q53F19 620 aaKnown RBP26.87■■□□□ 1.89
LMBR1-217ENST00000485985 CCDC191Q8NCU4 936 aa26.87■■□□□ 1.89
LMBR1-217ENST00000485985 SHTN1A0MZ66 631 aa26.86■■□□□ 1.89
LMBR1-217ENST00000485985 H7C1D1 291 aa26.86■■□□□ 1.89
LMBR1-217ENST00000485985 DDX58O95786 925 aaKnown RBP26.86■■□□□ 1.89
LMBR1-217ENST00000485985 WASHC4Q2M389 1173 aa26.86■■□□□ 1.89
LMBR1-217ENST00000485985 TWISTNBQ3B726 338 aaPredicted RBP26.86■■□□□ 1.89
LMBR1-217ENST00000485985 CDC37L1Q7L3B6 337 aa26.86■■□□□ 1.89
LMBR1-217ENST00000485985 HHIPL1Q96JK4 782 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms