RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 HIP1O00291 1037 aa14.65□□□□□ -0.06
SGSM3-213ENST00000485962 TCEANC2Q96MN5 208 aa14.65□□□□□ -0.06
SGSM3-213ENST00000485962 AXDND1Q5T1B0 1012 aaPredicted RBP14.65□□□□□ -0.06
SGSM3-213ENST00000485962 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
SGSM3-213ENST00000485962 KLHDC4Q8TBB5 520 aa14.65□□□□□ -0.06
SGSM3-213ENST00000485962 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
SGSM3-213ENST00000485962 CGNQ9P2M7 1197 aaKnown RBP14.65□□□□□ -0.06
SGSM3-213ENST00000485962 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
SGSM3-213ENST00000485962 MYL6BP14649 208 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 FERMT3Q86UX7 667 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 ADGRL3Q9HAR2 1447 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 PSMA5P28066 241 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 ANKLE2Q86XL3 938 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 KAZALD1Q96I82 304 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 TPCN1Q9ULQ1 816 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 NCAPD2Q15021 1401 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 ST3GAL1Q11201 340 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 ARHGEF25Q86VW2 580 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
SGSM3-213ENST00000485962 A0A0D9SFI3 127 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 SLC27A2O14975 620 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 RNF20Q5VTR2 975 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 BLOC1S2Q6QNY1 142 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 GPATCH11Q8N954 259 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 MAP4K1Q92918 833 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 DDX21Q9NR30 783 aaKnown RBP eCLIP14.63□□□□□ -0.07
SGSM3-213ENST00000485962 NEXNQ0ZGT2 675 aa14.63□□□□□ -0.07
SGSM3-213ENST00000485962 TTC12Q9H892 705 aaPredicted RBP14.63□□□□□ -0.07
SGSM3-213ENST00000485962 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
SGSM3-213ENST00000485962 SASS6Q6UVJ0 657 aa14.62□□□□□ -0.07
SGSM3-213ENST00000485962 KCNB2Q92953 911 aa14.62□□□□□ -0.07
SGSM3-213ENST00000485962 KRT85P78386 507 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 STK3Q13188 491 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 COL9A3Q14050 684 aaPredicted RBP14.61□□□□□ -0.07
SGSM3-213ENST00000485962 FAM173BQ6P4H8 233 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 KDM4AO75164 1064 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 AXIN2Q9Y2T1 843 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 IGKV5-2P06315 115 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 MYD88Q99836 296 aa14.61□□□□□ -0.07
SGSM3-213ENST00000485962 KIF20AO95235 890 aa14.6□□□□□ -0.07
SGSM3-213ENST00000485962 LARP1Q6PKG0 1096 aaKnown RBP14.6□□□□□ -0.07
SGSM3-213ENST00000485962 JARID2Q92833 1246 aaPredicted RBP14.6□□□□□ -0.07
SGSM3-213ENST00000485962 EDC3Q96F86 508 aaKnown RBP14.6□□□□□ -0.07
SGSM3-213ENST00000485962 DNAJC2Q99543 621 aaKnown RBP14.6□□□□□ -0.07
SGSM3-213ENST00000485962 HEG1Q9ULI3 1381 aa14.6□□□□□ -0.07
SGSM3-213ENST00000485962 GOLGA6L4A6NEF3 574 aa14.6□□□□□ -0.07
SGSM3-213ENST00000485962 PDCP20941 246 aa14.6□□□□□ -0.07
SGSM3-213ENST00000485962 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
SGSM3-213ENST00000485962 ANKRD1Q15327 319 aa14.6□□□□□ -0.07
SGSM3-213ENST00000485962 TTC6Q86TZ1 520 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 ZNF589Q86UQ0 364 aaPredicted RBP14.59□□□□□ -0.07
SGSM3-213ENST00000485962 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
SGSM3-213ENST00000485962 XAGE3Q8WTP9 111 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 TAF6LQ9Y6J9 622 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 UTYO14607 1347 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 CCDC192P0DO97 292 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 ZC3H6P61129 1189 aaKnown RBP14.59□□□□□ -0.07
SGSM3-213ENST00000485962 CAMK4Q16566 473 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 FUCA2Q9BTY2 467 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 OVOS2A0A0G2JMS6 1433 aa14.59□□□□□ -0.07
SGSM3-213ENST00000485962 NEURL1BA8MQ27 555 aa14.58□□□□□ -0.07
SGSM3-213ENST00000485962 RPS6KB1P23443 525 aa14.58□□□□□ -0.07
SGSM3-213ENST00000485962 PDIA6Q15084 440 aa14.58□□□□□ -0.07
SGSM3-213ENST00000485962 COPS6Q7L5N1 327 aa14.58□□□□□ -0.07
SGSM3-213ENST00000485962 PIBF1Q8WXW3 757 aa14.58□□□□□ -0.07
SGSM3-213ENST00000485962 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.07
SGSM3-213ENST00000485962 PIP4K2AP48426 406 aaPredicted RBP14.58□□□□□ -0.08
SGSM3-213ENST00000485962 NOLC1Q14978 699 aaKnown RBP eCLIP14.58□□□□□ -0.083e-6■□□□□ 8.5
SGSM3-213ENST00000485962 PHRF1Q9P1Y6 1649 aaKnown RBP14.58□□□□□ -0.08
SGSM3-213ENST00000485962 DYNC1I1O14576 645 aa14.58□□□□□ -0.08
SGSM3-213ENST00000485962 GCKRQ14397 625 aa14.58□□□□□ -0.08
SGSM3-213ENST00000485962 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
SGSM3-213ENST00000485962 SPC24Q8NBT2 197 aa14.58□□□□□ -0.08
SGSM3-213ENST00000485962 NUP62CLQ9H1M0 184 aa14.58□□□□□ -0.08
SGSM3-213ENST00000485962 TFIP11Q9UBB9 837 aaKnown RBP14.58□□□□□ -0.08
SGSM3-213ENST00000485962 NLRP2Q9NX02 1062 aa14.57□□□□□ -0.08
SGSM3-213ENST00000485962 NDUFB9Q9Y6M9 179 aa14.57□□□□□ -0.08
SGSM3-213ENST00000485962 MAP3K11Q16584 847 aa14.57□□□□□ -0.08
SGSM3-213ENST00000485962 NFATC2IPQ8NCF5 419 aa14.57□□□□□ -0.08
SGSM3-213ENST00000485962 MED23Q9ULK4 1368 aa14.56□□□□□ -0.08
SGSM3-213ENST00000485962 LOC102724159A0A0B4J2E5 919 aa14.56□□□□□ -0.08
SGSM3-213ENST00000485962 LIG1P18858 919 aa14.56□□□□□ -0.08
SGSM3-213ENST00000485962 TOB2Q14106 344 aaPredicted RBP14.56□□□□□ -0.08
SGSM3-213ENST00000485962 PWP2Q15269 919 aaKnown RBP14.56□□□□□ -0.08
SGSM3-213ENST00000485962 SPATA32Q96LK8 384 aa14.56□□□□□ -0.08
SGSM3-213ENST00000485962 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
SGSM3-213ENST00000485962 RGPD5Q99666 1765 aa14.56□□□□□ -0.08
SGSM3-213ENST00000485962 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
SGSM3-213ENST00000485962 SIPA1L3O60292 1781 aaPredicted RBP14.56□□□□□ -0.08
SGSM3-213ENST00000485962 KRT28Q7Z3Y7 464 aa14.55□□□□□ -0.08
SGSM3-213ENST00000485962 CKAP2LQ8IYA6 745 aa14.55□□□□□ -0.08
SGSM3-213ENST00000485962 METTL22Q9BUU2 404 aaPredicted RBP14.55□□□□□ -0.08
SGSM3-213ENST00000485962 SLC52A2Q9HAB3 445 aa14.55□□□□□ -0.08
SGSM3-213ENST00000485962 KDM4FA0A1W2PPD8 638 aa14.55□□□□□ -0.08
SGSM3-213ENST00000485962 ANKRD13DQ6ZTN6 518 aa14.55□□□□□ -0.08
SGSM3-213ENST00000485962 MAP7D2Q96T17 732 aa14.55□□□□□ -0.08
SGSM3-213ENST00000485962 TNMDQ9H2S6 317 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms