RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.79■■■□□ 2.36
ABCF3-216ENST00000485921 CRAMP1Q96RY5 1269 aa29.79■■■□□ 2.36
ABCF3-216ENST00000485921 MS4A1P11836 297 aa29.78■■■□□ 2.36
ABCF3-216ENST00000485921 CCDC152Q4G0S7 254 aa29.78■■■□□ 2.36
ABCF3-216ENST00000485921 DDX46Q7L014 1031 aaKnown RBP29.78■■■□□ 2.36
ABCF3-216ENST00000485921 PRPF40BQ6NWY9 871 aaKnown RBP29.77■■■□□ 2.36
ABCF3-216ENST00000485921 TTLL11Q8NHH1 800 aa29.77■■■□□ 2.36
ABCF3-216ENST00000485921 CCDC85AQ96PX6 553 aaPredicted RBP29.77■■■□□ 2.36
ABCF3-216ENST00000485921 PANK1Q8TE04 598 aa29.76■■■□□ 2.35
ABCF3-216ENST00000485921 SUCLG2Q96I99 432 aa29.76■■■□□ 2.35
ABCF3-216ENST00000485921 FOXO4P98177 505 aa29.75■■■□□ 2.35
ABCF3-216ENST00000485921 EPHA10Q5JZY3 1008 aa29.74■■■□□ 2.35
ABCF3-216ENST00000485921 GOLGB1Q14789 3259 aaKnown RBP29.74■■■□□ 2.35
ABCF3-216ENST00000485921 CSF1RP07333 972 aa29.73■■■□□ 2.35
ABCF3-216ENST00000485921 UBTFL1P0CB47 393 aaPredicted RBP29.73■■■□□ 2.35
ABCF3-216ENST00000485921 ITPRIPQ8IWB1 547 aa29.73■■■□□ 2.35
ABCF3-216ENST00000485921 KAZALD1Q96I82 304 aa29.73■■■□□ 2.35
ABCF3-216ENST00000485921 MEIS3Q99687 375 aa29.73■■■□□ 2.35
ABCF3-216ENST00000485921 ZNF219Q9P2Y4 722 aaPredicted RBP29.73■■■□□ 2.35
ABCF3-216ENST00000485921 GRAPQ13588 217 aa29.72■■■□□ 2.35
ABCF3-216ENST00000485921 GRAPLQ8TC17 118 aaPredicted RBP29.72■■■□□ 2.35
ABCF3-216ENST00000485921 GREM2Q9H772 168 aa29.72■■■□□ 2.35
ABCF3-216ENST00000485921 SEC31BQ9NQW1 1179 aa29.72■■■□□ 2.35
ABCF3-216ENST00000485921 SLX4Q8IY92 1834 aa29.72■■■□□ 2.35
ABCF3-216ENST00000485921 C21orf2O43822 256 aa29.71■■■□□ 2.35
ABCF3-216ENST00000485921 GRIN3BO60391 1043 aa29.71■■■□□ 2.35
ABCF3-216ENST00000485921 MYH3P11055 1940 aa29.71■■■□□ 2.35
ABCF3-216ENST00000485921 PPEF1O14829 653 aaPredicted RBP29.7■■■□□ 2.35
ABCF3-216ENST00000485921 BBOX1O75936 387 aa29.7■■■□□ 2.35
ABCF3-216ENST00000485921 LMBR1LQ6UX01 489 aa29.7■■■□□ 2.35
ABCF3-216ENST00000485921 C7orf43Q8WVR3 580 aa29.7■■■□□ 2.35
ABCF3-216ENST00000485921 CELF1Q92879 486 aaKnown RBP29.7■■■□□ 2.35
ABCF3-216ENST00000485921 BICC1Q9H694 974 aaKnown RBP29.7■■■□□ 2.35
ABCF3-216ENST00000485921 RTL9Q8NET4 1388 aa29.69■■■□□ 2.34
ABCF3-216ENST00000485921 GNAI3P08754 354 aa29.69■■■□□ 2.34
ABCF3-216ENST00000485921 RRP1P56182 461 aaKnown RBP29.69■■■□□ 2.34
ABCF3-216ENST00000485921 PDE3AQ14432 1141 aa29.69■■■□□ 2.34
ABCF3-216ENST00000485921 HDAC5Q9UQL6 1122 aa29.69■■■□□ 2.34
ABCF3-216ENST00000485921 CHMP3Q9Y3E7 222 aa29.69■■■□□ 2.34
ABCF3-216ENST00000485921 CACNA1SQ13698 1873 aa29.69■■■□□ 2.34
ABCF3-216ENST00000485921 FAM161AQ3B820 660 aa29.68■■■□□ 2.34
ABCF3-216ENST00000485921 ARFGEF1Q9Y6D6 1849 aa29.68■■■□□ 2.34
ABCF3-216ENST00000485921 RPS8P62241 208 aaKnown RBP29.67■■■□□ 2.34
ABCF3-216ENST00000485921 C20orf194Q5TEA3 1177 aa29.67■■■□□ 2.34
ABCF3-216ENST00000485921 TAF1P21675 1872 aa29.66■■■□□ 2.34
ABCF3-216ENST00000485921 ITGA6P23229 1130 aa29.66■■■□□ 2.34
ABCF3-216ENST00000485921 RABL6Q3YEC7 729 aaPredicted RBP29.66■■■□□ 2.34
ABCF3-216ENST00000485921 ARHGAP27Q6ZUM4 889 aa29.66■■■□□ 2.34
ABCF3-216ENST00000485921 ANKRD44Q8N8A2 993 aa29.66■■■□□ 2.34
ABCF3-216ENST00000485921 CDC5LQ99459 802 aaKnown RBP29.66■■■□□ 2.34
ABCF3-216ENST00000485921 COG6Q9Y2V7 657 aa29.66■■■□□ 2.34
ABCF3-216ENST00000485921 LRRFIP2Q9Y608 721 aaKnown RBP29.66■■■□□ 2.34
ABCF3-216ENST00000485921 ZBTB7BO15156 539 aaPredicted RBP29.65■■■□□ 2.34
ABCF3-216ENST00000485921 MVPQ14764 893 aaKnown RBP29.65■■■□□ 2.34
ABCF3-216ENST00000485921 SOGA3Q5TF21 947 aa29.65■■■□□ 2.34
ABCF3-216ENST00000485921 OLFM4Q6UX06 510 aa29.65■■■□□ 2.34
ABCF3-216ENST00000485921 ATP6V0A2Q9Y487 856 aa29.65■■■□□ 2.34
ABCF3-216ENST00000485921 IFIT5Q13325 482 aaKnown RBP29.64■■■□□ 2.34
ABCF3-216ENST00000485921 TMC4Q7Z404 712 aa29.64■■■□□ 2.34
ABCF3-216ENST00000485921 ANKRD18AQ8IVF6 992 aa29.64■■■□□ 2.34
ABCF3-216ENST00000485921 COL4A1P02462 1669 aa29.63■■■□□ 2.33
ABCF3-216ENST00000485921 ANKRD18BA2A2Z9 1011 aa29.63■■■□□ 2.33
ABCF3-216ENST00000485921 CCDC93Q567U6 631 aa29.63■■■□□ 2.33
ABCF3-216ENST00000485921 SP8Q8IXZ3 490 aa29.63■■■□□ 2.33
ABCF3-216ENST00000485921 TMX4Q9H1E5 349 aaPredicted RBP29.63■■■□□ 2.33
ABCF3-216ENST00000485921 GNAI2P04899 355 aa29.62■■■□□ 2.33
ABCF3-216ENST00000485921 CCDC57Q2TAC2 916 aa29.62■■■□□ 2.33
ABCF3-216ENST00000485921 CC2D2BQ6DHV5 1058 aa29.62■■■□□ 2.33
ABCF3-216ENST00000485921 SLC51AQ86UW1 340 aa29.62■■■□□ 2.33
ABCF3-216ENST00000485921 DDX19BQ9UMR2 479 aa29.61■■■□□ 2.33
ABCF3-216ENST00000485921 IGHMBP2P38935 993 aaKnown RBP29.6■■■□□ 2.33
ABCF3-216ENST00000485921 RTKN2Q8IZC4 609 aa29.59■■■□□ 2.33
ABCF3-216ENST00000485921 UTRNP46939 3433 aa29.59■■■□□ 2.33
ABCF3-216ENST00000485921 BSDC1Q9NW68 430 aaPredicted RBP29.58■■■□□ 2.33
ABCF3-216ENST00000485921 SUPT16HQ9Y5B9 1047 aaKnown RBP29.58■■■□□ 2.33
ABCF3-216ENST00000485921 GRIPAP1Q4V328 841 aa29.57■■■□□ 2.32
ABCF3-216ENST00000485921 TAF7LQ5H9L4 462 aa29.57■■■□□ 2.32
ABCF3-216ENST00000485921 MPHOSPH8Q99549 860 aa29.57■■■□□ 2.32
ABCF3-216ENST00000485921 NFKBIEO00221 500 aa29.56■■■□□ 2.32
ABCF3-216ENST00000485921 ZNF594Q96JF6 807 aaPredicted RBP29.56■■■□□ 2.32
ABCF3-216ENST00000485921 RASSF7Q02833 373 aa29.55■■■□□ 2.32
ABCF3-216ENST00000485921 TAOK3Q9H2K8 898 aa29.55■■■□□ 2.32
ABCF3-216ENST00000485921 CHMP4BQ9H444 224 aaKnown RBP29.55■■■□□ 2.32
ABCF3-216ENST00000485921 C1orf115Q9H7X2 142 aa29.55■■■□□ 2.32
ABCF3-216ENST00000485921 SNED1Q8TER0 1413 aa29.54■■■□□ 2.32
ABCF3-216ENST00000485921 FKBP4Q02790 459 aaKnown RBP eCLIP29.53■■■□□ 2.32
ABCF3-216ENST00000485921 MPNDQ8N594 471 aa29.53■■■□□ 2.32
ABCF3-216ENST00000485921 FER1L6Q2WGJ9 1857 aa29.53■■■□□ 2.32
ABCF3-216ENST00000485921 LTBP3Q9NS15 1303 aa29.52■■■□□ 2.32
ABCF3-216ENST00000485921 MTX1Q13505 466 aa29.52■■■□□ 2.32
ABCF3-216ENST00000485921 DPP8Q6V1X1 898 aaPredicted RBP29.52■■■□□ 2.32
ABCF3-216ENST00000485921 ZBTB40Q9NUA8 1239 aa29.52■■■□□ 2.32
ABCF3-216ENST00000485921 MINPP1Q9UNW1 487 aa29.52■■■□□ 2.32
ABCF3-216ENST00000485921 NSFL1CQ9UNZ2 370 aaKnown RBP29.52■■■□□ 2.32
ABCF3-216ENST00000485921 RFX5P48382 616 aaPredicted RBP29.51■■■□□ 2.31
ABCF3-216ENST00000485921 GPSM2P81274 684 aa29.51■■■□□ 2.31
ABCF3-216ENST00000485921 LDHAL6AQ6ZMR3 332 aa29.51■■■□□ 2.31
ABCF3-216ENST00000485921 PSMD1Q99460 953 aa29.51■■■□□ 2.31
ABCF3-216ENST00000485921 LRRC37AA6NMS7 1700 aa29.51■■■□□ 2.31
ABCF3-216ENST00000485921 SRGAP3O43295 1099 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms