RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	BCS1L	Q9Y276	419 aa		13.52	□□□□□ -0.25
TPRKB-208	ENST00000485758	RNF123	Q5XPI4	1314 aa		13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	DDX58	O95786	925 aa	Known RBP	13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	GTF2E1	P29083	439 aa	Predicted RBP	13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	GSE1	Q14687	1217 aa		13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	NLRP10	Q86W26	655 aa		13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	NUTM1	Q86Y26	1132 aa		13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	CDCA7L	Q96GN5	454 aa		13.51	□□□□□ -0.25
TPRKB-208	ENST00000485758	SLX4	Q8IY92	1834 aa		13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	ERFE	Q4G0M1	354 aa		13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	DALRD3	Q5D0E6	543 aa	Known RBP	13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	RIC3	Q7Z5B4	369 aa		13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	TRMT2A	Q8IZ69	625 aa	Known RBP	13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	ISCA1	Q9BUE6	129 aa		13.5	□□□□□ -0.25
TPRKB-208	ENST00000485758	ADCY9	O60503	1353 aa		13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	SBF1	O95248	1867 aa		13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	KLRG2	A4D1S0	409 aa	Predicted RBP	13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	SRGN	P10124	158 aa		13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	G2E3	Q7L622	706 aa		13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	UTP14A	Q9BVJ6	771 aa	Known RBP	13.49	□□□□□ -0.25
TPRKB-208	ENST00000485758	FER1L6	Q2WGJ9	1857 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	CCDC88A	Q3V6T2	1871 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	ATP5J2-PTCD1	G3V325	749 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	FLII	Q13045	1269 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	TRIM28	Q13263	835 aa	Known RBP	13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	STYK1	Q6J9G0	422 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	KSR2	Q6VAB6	950 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	TTLL6	Q8N841	843 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	MASTL	Q96GX5	879 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	METTL22	Q9BUU2	404 aa	Predicted RBP	13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	MYH3	P11055	1940 aa		13.48	□□□□□ -0.25
TPRKB-208	ENST00000485758	PI4KAP2	A4QPH2	592 aa		13.47	□□□□□ -0.25
TPRKB-208	ENST00000485758	PI4KAP1	Q8N8J0	262 aa		13.47	□□□□□ -0.25
TPRKB-208	ENST00000485758	MYD88	Q99836	296 aa		13.47	□□□□□ -0.25
TPRKB-208	ENST00000485758	MAP3K2	Q9Y2U5	619 aa		13.47	□□□□□ -0.25
TPRKB-208	ENST00000485758	SH3TC1	Q8TE82	1336 aa		13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	NPR1	P16066	1061 aa		13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	FKBP5	Q13451	457 aa	Predicted RBP	13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	CRY2	Q49AN0	593 aa		13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	SLC10A5	Q5PT55	438 aa		13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	CNKSR1	Q969H4	720 aa		13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	TRMT112	Q9UI30	125 aa	Known RBP	13.46	□□□□□ -0.25
TPRKB-208	ENST00000485758	TAF1	P21675	1872 aa		13.45	□□□□□ -0.26
TPRKB-208	ENST00000485758	YY1	P25490	414 aa		13.45	□□□□□ -0.26
TPRKB-208	ENST00000485758	CCDC191	Q8NCU4	936 aa		13.45	□□□□□ -0.26
TPRKB-208	ENST00000485758	ZNF428	Q96B54	188 aa		13.45	□□□□□ -0.26
TPRKB-208	ENST00000485758	IGKV5-2	P06315	115 aa		13.44	□□□□□ -0.26
TPRKB-208	ENST00000485758	NEXN	Q0ZGT2	675 aa		13.44	□□□□□ -0.26
TPRKB-208	ENST00000485758	PRPF40B	Q6NWY9	871 aa	Known RBP	13.44	□□□□□ -0.26
TPRKB-208	ENST00000485758	SYNE4	Q8N205	404 aa		13.44	□□□□□ -0.26
TPRKB-208	ENST00000485758	NLRP3	Q96P20	1036 aa		13.44	□□□□□ -0.26
TPRKB-208	ENST00000485758	DICER1	Q9UPY3	1922 aa	Known RBP	13.44	□□□□□ -0.26
TPRKB-208	ENST00000485758	ZBED9	Q6R2W3	1325 aa		13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	CT47B1	P0C2W7	299 aa	Predicted RBP	13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	HCLS1	P14317	486 aa	Predicted RBP	13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	HOXA10	P31260	410 aa	Predicted RBP	13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	ARHGAP27	Q6ZUM4	889 aa		13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	C3orf67	Q6ZVT6	689 aa		13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	TIAM2	Q8IVF5	1701 aa		13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	DNAAF4	Q8WXU2	420 aa		13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	RPGR	Q92834	1020 aa	Known RBP	13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	FAM89A	Q96GI7	184 aa		13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	CWC25	Q9NXE8	425 aa	Predicted RBP	13.43	□□□□□ -0.26
TPRKB-208	ENST00000485758	ALDH1B1	P30837	517 aa		13.42	□□□□□ -0.26
TPRKB-208	ENST00000485758	ALDH1L2	Q3SY69	923 aa		13.42	□□□□□ -0.26
TPRKB-208	ENST00000485758	MRPL50	Q8N5N7	158 aa	Known RBP	13.42	□□□□□ -0.26
TPRKB-208	ENST00000485758	SSH1	Q8WYL5	1049 aa		13.42	□□□□□ -0.26
TPRKB-208	ENST00000485758	NEURL1B	A8MQ27	555 aa		13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758		F6X3S4	739 aa		13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	C21orf2	O43822	256 aa		13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	PCCA	P05165	728 aa	Predicted RBP	13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	PSEN1	P49768	467 aa		13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	CWF19L2	Q2TBE0	894 aa	Known RBP	13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	RTL5	Q5HYW3	569 aa	Predicted RBP	13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	RBM17	Q96I25	401 aa	Known RBP	13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	CRAMP1	Q96RY5	1269 aa		13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	LRRC37A	A6NMS7	1700 aa		13.41	□□□□□ -0.26
TPRKB-208	ENST00000485758	IRS4	O14654	1257 aa	Predicted RBP	13.4	□□□□□ -0.26
TPRKB-208	ENST00000485758	SNPH	O15079	494 aa		13.4	□□□□□ -0.26
TPRKB-208	ENST00000485758	SOGA3	Q5TF21	947 aa		13.4	□□□□□ -0.26
TPRKB-208	ENST00000485758	LINS1	Q8NG48	757 aa		13.4	□□□□□ -0.26
TPRKB-208	ENST00000485758	C7orf43	Q8WVR3	580 aa		13.4	□□□□□ -0.26
TPRKB-208	ENST00000485758	BCL2L13	Q9BXK5	485 aa		13.4	□□□□□ -0.26
TPRKB-208	ENST00000485758	PTPRC	P08575	1304 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	CDHR2	Q9BYE9	1310 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	SNED1	Q8TER0	1413 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	SPEF2	Q9C093	1822 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	NFKBIE	O00221	500 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	HSP90B1	P14625	803 aa	Known RBP	13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	RASSF7	Q02833	373 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	SMC4	Q9NTJ3	1288 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	COL4A1	P02462	1669 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	ABCC4	O15439	1325 aa		13.39	□□□□□ -0.27
TPRKB-208	ENST00000485758	GCKR	Q14397	625 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 545.6 ms