RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
RTN4-213ENST00000485749 PCDHGA11Q9Y5H2 935 aa6.16□□□□□ -1.42
RTN4-213ENST00000485749 ELOA3CA0A087WX78 387 aaPredicted RBP6.15□□□□□ -1.42
RTN4-213ENST00000485749 ELOA3DA6NLF2 546 aaPredicted RBP6.15□□□□□ -1.42
RTN4-213ENST00000485749 APBA3O96018 575 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 NPR3P17342 541 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 CD33P20138 364 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 WEE1P30291 646 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 SCNN1AP37088 669 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 ARHGAP4P98171 946 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 PSME1Q06323 249 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 ELOA3BQ3SY89 546 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 EAPPQ56P03 285 aaPredicted RBP6.15□□□□□ -1.42
RTN4-213ENST00000485749 ELOA3Q8NG57 546 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 GTF3C2Q8WUA4 911 aaPredicted RBP6.15□□□□□ -1.42
RTN4-213ENST00000485749 PRIMPOLQ96LW4 560 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 NACC1Q96RE7 527 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 SERTAD1Q9UHV2 236 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 KIAA1024Q9UPX6 916 aa6.15□□□□□ -1.42
RTN4-213ENST00000485749 ZNF211Q13398 564 aaPredicted RBP6.14□□□□□ -1.43
RTN4-213ENST00000485749 NAALADL2Q58DX5 795 aa6.14□□□□□ -1.43
RTN4-213ENST00000485749 TPCN2Q8NHX9 752 aa6.14□□□□□ -1.43
RTN4-213ENST00000485749 ZIC5Q96T25 663 aa6.14□□□□□ -1.43
RTN4-213ENST00000485749 RBCK1Q9BYM8 510 aa6.14□□□□□ -1.43
RTN4-213ENST00000485749 CHMP3Q9Y3E7 222 aa6.14□□□□□ -1.43
RTN4-213ENST00000485749 SCAMP3O14828 347 aaKnown RBP6.13□□□□□ -1.43
RTN4-213ENST00000485749 FAM13AO94988 1023 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 CHRNA4P43681 627 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 ANAPC15P60006 121 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 MRPL58Q14197 206 aaKnown RBP6.13□□□□□ -1.43
RTN4-213ENST00000485749 HSP90AB4PQ58FF6 505 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 FCHSD1Q86WN1 690 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 EXOC8Q8IYI6 725 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 CITED4Q96RK1 184 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 PLVAPQ9BX97 442 aa6.13□□□□□ -1.43
RTN4-213ENST00000485749 PLEKHD1A6NEE1 506 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 SFI1A8K8P3 1242 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 TMEM229AB2RXF0 380 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 MAFGO15525 162 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 SMARCA5O60264 1052 aaPredicted RBP6.12□□□□□ -1.43
RTN4-213ENST00000485749 SIN3BO75182 1162 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 STAU1O95793 577 aaKnown RBP6.12□□□□□ -1.43
RTN4-213ENST00000485749 PCBP4P57723 403 aaKnown RBP6.12□□□□□ -1.43
RTN4-213ENST00000485749 HINFPQ9BQA5 517 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 SEMA6BQ9H3T3 888 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 ANO2Q9NQ90 1003 aa6.12□□□□□ -1.43
RTN4-213ENST00000485749 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
RTN4-213ENST00000485749 EFSO43281 561 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 TAGLNQ01995 201 aaKnown RBP6.11□□□□□ -1.43
RTN4-213ENST00000485749 HELQQ8TDG4 1101 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 SPATA32Q96LK8 384 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 BACH2Q9BYV9 841 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 MYH16Q9H6N6 1097 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 ANKIB1Q9P2G1 1089 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 SEPT3Q9UH03 358 aa6.11□□□□□ -1.43
RTN4-213ENST00000485749 CADPSQ9ULU8 1353 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
RTN4-213ENST00000485749 FOXO3O43524 673 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 ERCC5P28715 1186 aaPredicted RBP6.1□□□□□ -1.43
RTN4-213ENST00000485749 AAMPQ13685 434 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 DOC2BQ14184 412 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 TEAD4Q15561 434 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 TSNAXIP1Q2TAA8 658 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 ZMYM1Q5SVZ6 1142 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 SYT9Q86SS6 491 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 GAS2L2Q8NHY3 880 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 SCHIP1Q9P0W5 487 aaPredicted RBP6.1□□□□□ -1.43
RTN4-213ENST00000485749 KLF15Q9UIH9 416 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 ZNF232Q9UNY5 417 aa6.1□□□□□ -1.43
RTN4-213ENST00000485749 LOC102724159A0A0B4J2E5 919 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 IGFBP4P22692 258 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 NOS2P35228 1153 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 TRIM28Q13263 835 aaKnown RBP6.09□□□□□ -1.43
RTN4-213ENST00000485749 PWP2Q15269 919 aaKnown RBP6.09□□□□□ -1.43
RTN4-213ENST00000485749 ZNF295-AS1Q8N0V1 137 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 GPATCH11Q8N954 259 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 TNFRSF25Q93038 417 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 L3MBTL2Q969R5 705 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 TRIM11Q96F44 468 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 PRDM10Q9NQV6 1147 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 PRDM6Q9NQX0 595 aa6.09□□□□□ -1.43
RTN4-213ENST00000485749 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.09□□□□□ -1.43
RTN4-213ENST00000485749 TREHO43280 583 aa6.08□□□□□ -1.44
RTN4-213ENST00000485749 NDUFB5O43674 189 aa6.08□□□□□ -1.44
RTN4-213ENST00000485749 MCCP23508 829 aa6.08□□□□□ -1.44
RTN4-213ENST00000485749 FMR1Q06787 632 aaKnown RBP eCLIP6.08□□□□□ -1.44
RTN4-213ENST00000485749 FKBP5Q13451 457 aaPredicted RBP6.08□□□□□ -1.44
RTN4-213ENST00000485749 HIF1AQ16665 826 aa6.08□□□□□ -1.44
RTN4-213ENST00000485749 TMC7Q7Z402 723 aa6.08□□□□□ -1.44
RTN4-213ENST00000485749 SCO2A0A1W2PP80 73 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 SERTM1A2A2V5 107 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 ANKRD62A6NC57 917 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 M0R082 166 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 EML1O00423 815 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 NEFMP07197 916 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 P4HBP07237 508 aaKnown RBP6.07□□□□□ -1.44
RTN4-213ENST00000485749 GORABQ5T7V8 394 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 ALKBH2Q6NS38 261 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 LRRC69Q6ZNQ3 347 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms