RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 PIM2Q9P1W9 311 aa19.52■□□□□ 0.72
RPUSD3-217ENST00000485705 COL4A1P02462 1669 aa19.52■□□□□ 0.71
RPUSD3-217ENST00000485705 FOXO4P98177 505 aa19.51■□□□□ 0.71
RPUSD3-217ENST00000485705 ITPRIPQ8IWB1 547 aa19.51■□□□□ 0.71
RPUSD3-217ENST00000485705 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
RPUSD3-217ENST00000485705 HSP90B1P14625 803 aaKnown RBP19.5■□□□□ 0.71
RPUSD3-217ENST00000485705 HOXA10P31260 410 aaPredicted RBP19.5■□□□□ 0.71
RPUSD3-217ENST00000485705 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
RPUSD3-217ENST00000485705 TTLL11Q8NHH1 800 aa19.5■□□□□ 0.71
RPUSD3-217ENST00000485705 UTRNP46939 3433 aa19.5■□□□□ 0.71
RPUSD3-217ENST00000485705 MS4A1P11836 297 aa19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 YBX3P16989 372 aaKnown RBP eCLIP19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 DALRD3Q5D0E6 543 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 TTLL6Q8N841 843 aa19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 RBM17Q96I25 401 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 BCS1LQ9Y276 419 aa19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
RPUSD3-217ENST00000485705 CSF1RP07333 972 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 UBTFL1P0CB47 393 aaPredicted RBP19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 PDE3AQ14432 1141 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 CCDC152Q4G0S7 254 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 SLC51AQ86UW1 340 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 CNKSR1Q969H4 720 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 CRAMP1Q96RY5 1269 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 BICC1Q9H694 974 aaKnown RBP19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 GREM2Q9H772 168 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 SUPT16HQ9Y5B9 1047 aaKnown RBP19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 ARFGEF1Q9Y6D6 1849 aa19.48■□□□□ 0.71
RPUSD3-217ENST00000485705 PRPF40BQ6NWY9 871 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-217ENST00000485705 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
RPUSD3-217ENST00000485705 DDX46Q7L014 1031 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-217ENST00000485705 CELF1Q92879 486 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-217ENST00000485705 ZNF219Q9P2Y4 722 aaPredicted RBP19.47■□□□□ 0.71
RPUSD3-217ENST00000485705 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-217ENST00000485705 ZBTB7BO15156 539 aaPredicted RBP19.46■□□□□ 0.71
RPUSD3-217ENST00000485705 ALDH1B1P30837 517 aa19.46■□□□□ 0.71
RPUSD3-217ENST00000485705 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
RPUSD3-217ENST00000485705 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
RPUSD3-217ENST00000485705 ANKRD44Q8N8A2 993 aa19.46■□□□□ 0.71
RPUSD3-217ENST00000485705 SPEF2Q9C093 1822 aa19.46■□□□□ 0.71
RPUSD3-217ENST00000485705 GPR162Q16538 588 aa19.45■□□□□ 0.7
RPUSD3-217ENST00000485705 OLFM4Q6UX06 510 aa19.45■□□□□ 0.7
RPUSD3-217ENST00000485705 CHMP3Q9Y3E7 222 aa19.45■□□□□ 0.7
RPUSD3-217ENST00000485705 GNAI3P08754 354 aa19.44■□□□□ 0.7
RPUSD3-217ENST00000485705 GRAPQ13588 217 aa19.44■□□□□ 0.7
RPUSD3-217ENST00000485705 RABL6Q3YEC7 729 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-217ENST00000485705 GRAPLQ8TC17 118 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-217ENST00000485705 RTL9Q8NET4 1388 aa19.44■□□□□ 0.7
RPUSD3-217ENST00000485705 C21orf2O43822 256 aa19.43■□□□□ 0.7
RPUSD3-217ENST00000485705 ITGA6P23229 1130 aa19.43■□□□□ 0.7
RPUSD3-217ENST00000485705 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
RPUSD3-217ENST00000485705 C1orf115Q9H7X2 142 aa19.43■□□□□ 0.7
RPUSD3-217ENST00000485705 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
RPUSD3-217ENST00000485705 DDX19BQ9UMR2 479 aa19.42■□□□□ 0.7
RPUSD3-217ENST00000485705 BBOX1O75936 387 aa19.41■□□□□ 0.7
RPUSD3-217ENST00000485705 GNAI2P04899 355 aa19.41■□□□□ 0.7
RPUSD3-217ENST00000485705 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
RPUSD3-217ENST00000485705 FER1L6Q2WGJ9 1857 aa19.4■□□□□ 0.7
RPUSD3-217ENST00000485705 IFIT5Q13325 482 aaKnown RBP19.4■□□□□ 0.7
RPUSD3-217ENST00000485705 ZNF594Q96JF6 807 aaPredicted RBP19.4■□□□□ 0.7
RPUSD3-217ENST00000485705 CDC5LQ99459 802 aaKnown RBP19.4■□□□□ 0.7
RPUSD3-217ENST00000485705 ANKRD18BA2A2Z9 1011 aa19.39■□□□□ 0.69
RPUSD3-217ENST00000485705 CCDC57Q2TAC2 916 aa19.39■□□□□ 0.69
RPUSD3-217ENST00000485705 ANKRD18AQ8IVF6 992 aa19.39■□□□□ 0.69
RPUSD3-217ENST00000485705 CRBNQ96SW2 442 aa19.39■□□□□ 0.69
RPUSD3-217ENST00000485705 HDAC5Q9UQL6 1122 aa19.39■□□□□ 0.69
RPUSD3-217ENST00000485705 ATP6V0A2Q9Y487 856 aa19.39■□□□□ 0.69
RPUSD3-217ENST00000485705 CCDC88AQ3V6T2 1871 aa19.38■□□□□ 0.69
RPUSD3-217ENST00000485705 ZBTB40Q9NUA8 1239 aa19.38■□□□□ 0.69
RPUSD3-217ENST00000485705 LRRC37AA6NMS7 1700 aa19.37■□□□□ 0.69
RPUSD3-217ENST00000485705 RFX5P48382 616 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-217ENST00000485705 ARHGAP27Q6ZUM4 889 aa19.37■□□□□ 0.69
RPUSD3-217ENST00000485705 SP8Q8IXZ3 490 aa19.37■□□□□ 0.69
RPUSD3-217ENST00000485705 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
RPUSD3-217ENST00000485705 SNED1Q8TER0 1413 aa19.36■□□□□ 0.69
RPUSD3-217ENST00000485705 IGHMBP2P38935 993 aaKnown RBP19.36■□□□□ 0.69
RPUSD3-217ENST00000485705 CCDC93Q567U6 631 aa19.36■□□□□ 0.69
RPUSD3-217ENST00000485705 SBF1O95248 1867 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 PNMA6EA0A0J9YXQ4 647 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 NFKBIEO00221 500 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 IRX6P78412 446 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 RASSF7Q02833 373 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 MTX1Q13505 466 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 TAF7LQ5H9L4 462 aa19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 BSDC1Q9NW68 430 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-217ENST00000485705 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
RPUSD3-217ENST00000485705 TMC4Q7Z404 712 aa19.34■□□□□ 0.69
RPUSD3-217ENST00000485705 MPHOSPH8Q99549 860 aa19.34■□□□□ 0.69
RPUSD3-217ENST00000485705 MINPP1Q9UNW1 487 aa19.34■□□□□ 0.69
RPUSD3-217ENST00000485705 PA2G4Q9UQ80 394 aaKnown RBP19.34■□□□□ 0.69
RPUSD3-217ENST00000485705 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
RPUSD3-217ENST00000485705 PRELPP51888 382 aa19.33■□□□□ 0.68
RPUSD3-217ENST00000485705 GPSM2P81274 684 aa19.33■□□□□ 0.68
RPUSD3-217ENST00000485705 ATP8B2P98198 1209 aa19.33■□□□□ 0.68
RPUSD3-217ENST00000485705 PTPN12Q05209 780 aaKnown RBP19.33■□□□□ 0.68
RPUSD3-217ENST00000485705 SOGA3Q5TF21 947 aa19.33■□□□□ 0.68
RPUSD3-217ENST00000485705 CC2D2BQ6DHV5 1058 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms