RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 NECTIN2Q92692 538 aa17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 GPR101Q96P66 508 aaPredicted RBP17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 HCLS1P14317 486 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 GMPSP49915 693 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 KIAA2012Q0VF49 1180 aa17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 GRAPQ13588 217 aa17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 TNIP1Q15025 636 aa17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 GRAPLQ8TC17 118 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-211ENST00000485592 CELF2O95319 508 aaKnown RBP17.97■□□□□ 0.47
SMARCD3-211ENST00000485592 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
SMARCD3-211ENST00000485592 RALBP1Q15311 655 aa17.97■□□□□ 0.47
SMARCD3-211ENST00000485592 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
SMARCD3-211ENST00000485592 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
SMARCD3-211ENST00000485592 LRRC37AA6NMS7 1700 aa17.96■□□□□ 0.47
SMARCD3-211ENST00000485592 RAD17O75943 681 aa17.96■□□□□ 0.47
SMARCD3-211ENST00000485592 TAF1P21675 1872 aa17.95■□□□□ 0.46
SMARCD3-211ENST00000485592 MAP2K2P36507 400 aa17.95■□□□□ 0.46
SMARCD3-211ENST00000485592 ZC3H15Q8WU90 426 aaKnown RBP17.95■□□□□ 0.46
SMARCD3-211ENST00000485592 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
SMARCD3-211ENST00000485592 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
SMARCD3-211ENST00000485592 SAPCD2Q86UD0 394 aa17.94■□□□□ 0.46
SMARCD3-211ENST00000485592 HHIPL1Q96JK4 782 aa17.94■□□□□ 0.46
SMARCD3-211ENST00000485592 GLIS2Q9BZE0 524 aaPredicted RBP17.94■□□□□ 0.46
SMARCD3-211ENST00000485592 ZNF408Q9H9D4 720 aa17.94■□□□□ 0.46
SMARCD3-211ENST00000485592 DUOX1Q9NRD9 1551 aa17.93■□□□□ 0.46
SMARCD3-211ENST00000485592 AOC2O75106 756 aa17.93■□□□□ 0.46
SMARCD3-211ENST00000485592 CHPF2Q9P2E5 772 aa17.93■□□□□ 0.46
SMARCD3-211ENST00000485592 PGAP2Q9UHJ9 254 aa17.93■□□□□ 0.46
SMARCD3-211ENST00000485592 LAS1LQ9Y4W2 734 aaKnown RBP17.93■□□□□ 0.46
SMARCD3-211ENST00000485592 H7C1D1 291 aa17.92■□□□□ 0.46
SMARCD3-211ENST00000485592 CA12O43570 354 aa17.92■□□□□ 0.46
SMARCD3-211ENST00000485592 HDGFL1Q5TGJ6 251 aa17.92■□□□□ 0.46
SMARCD3-211ENST00000485592 CDC37L1Q7L3B6 337 aa17.92■□□□□ 0.46
SMARCD3-211ENST00000485592 CNOT7Q9UIV1 285 aaKnown RBP17.92■□□□□ 0.46
SMARCD3-211ENST00000485592 YDJCA8MPS7 323 aa17.91■□□□□ 0.46
SMARCD3-211ENST00000485592 CHL1O00533 1208 aa17.91■□□□□ 0.46
SMARCD3-211ENST00000485592 KRT24Q2M2I5 525 aa17.91■□□□□ 0.46
SMARCD3-211ENST00000485592 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
SMARCD3-211ENST00000485592 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
SMARCD3-211ENST00000485592 TRPM4Q8TD43 1214 aa17.91■□□□□ 0.46
SMARCD3-211ENST00000485592 HOXB7P09629 217 aa17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 HIRAP54198 1017 aaPredicted RBP17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 MICALL2Q8IY33 904 aa17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 DBF4Q9UBU7 674 aaPredicted RBP17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 TSKSQ9UJT2 592 aa17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 NSFL1CQ9UNZ2 370 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-211ENST00000485592 BRPF1P55201 1214 aaPredicted RBP17.89■□□□□ 0.45
SMARCD3-211ENST00000485592 RUNDC1Q96C34 613 aa17.89■□□□□ 0.45
SMARCD3-211ENST00000485592 MYBBP1AQ9BQG0 1328 aaKnown RBP17.89■□□□□ 0.45
SMARCD3-211ENST00000485592 CCDC85CA6NKD9 419 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 C6orf229H3BNL8 230 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 SF3B3Q15393 1217 aaKnown RBP17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 DPF2Q92785 391 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 EYA3Q99504 573 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 ISCA1Q9BUE6 129 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 DBNDD1Q9H9R9 158 aa17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
SMARCD3-211ENST00000485592 SHTN1A0MZ66 631 aa17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 ATP5J2-PTCD1G3V325 749 aa17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 PSMD14O00487 310 aa17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 FAM161AQ3B820 660 aa17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 CELF1Q92879 486 aaKnown RBP17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 HYPKQ9NX55 129 aa17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
SMARCD3-211ENST00000485592 RIMBP2O15034 1052 aa17.86■□□□□ 0.45
SMARCD3-211ENST00000485592 RPS12P25398 132 aaKnown RBP17.86■□□□□ 0.45
SMARCD3-211ENST00000485592 NOGQ13253 232 aa17.86■□□□□ 0.45
SMARCD3-211ENST00000485592 USP48Q86UV5 1035 aa17.86■□□□□ 0.45
SMARCD3-211ENST00000485592 ECE2O60344 883 aa17.85■□□□□ 0.45
SMARCD3-211ENST00000485592 HUNKP57058 714 aa17.85■□□□□ 0.45
SMARCD3-211ENST00000485592 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
SMARCD3-211ENST00000485592 SAMD7Q7Z3H4 446 aa17.85■□□□□ 0.45
SMARCD3-211ENST00000485592 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 GPSM2P81274 684 aa17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 TBC1D10BQ4KMP7 808 aaPredicted RBP17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 KRT26Q7Z3Y9 468 aa17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 DCPSQ96C86 337 aaKnown RBP17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 CFAP44Q96MT7 982 aa17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 POLLQ9UGP5 575 aa17.84■□□□□ 0.45
SMARCD3-211ENST00000485592 CASP8AP2Q9UKL3 1982 aa17.83■□□□□ 0.44
SMARCD3-211ENST00000485592 MLLT1Q03111 559 aaPredicted RBP17.83■□□□□ 0.44
SMARCD3-211ENST00000485592 GOLGA2Q08379 1002 aa17.83■□□□□ 0.44
SMARCD3-211ENST00000485592 RIC3Q7Z5B4 369 aa17.83■□□□□ 0.44
SMARCD3-211ENST00000485592 G3V3G9 751 aa17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 RPS8P62241 208 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 TRIM28Q13263 835 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 DOK7Q18PE1 504 aa17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 RBM26Q5T8P6 1007 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms