RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 ABCC12Q96J65 1359 aa15.5■□□□□ 0.07
TRA2B-213ENST00000485530 KLRG2A4D1S0 409 aaPredicted RBP15.5■□□□□ 0.07
TRA2B-213ENST00000485530 ALDH1L1O75891 902 aa15.5■□□□□ 0.07
TRA2B-213ENST00000485530 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
TRA2B-213ENST00000485530 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
TRA2B-213ENST00000485530 TTLL6Q8N841 843 aa15.5■□□□□ 0.07
TRA2B-213ENST00000485530 BRIP1Q9BX63 1249 aa15.5■□□□□ 0.07
TRA2B-213ENST00000485530 NYXQ9GZU5 481 aa15.5■□□□□ 0.07
TRA2B-213ENST00000485530 USP44Q9H0E7 712 aa15.5■□□□□ 0.07
TRA2B-213ENST00000485530 NBPF7P0C2Y1 421 aaPredicted RBP15.49■□□□□ 0.07
TRA2B-213ENST00000485530 TMEM57Q8N5G2 664 aa15.49■□□□□ 0.07
TRA2B-213ENST00000485530 PANK1Q8TE04 598 aa15.49■□□□□ 0.07
TRA2B-213ENST00000485530 CNTNAP1P78357 1384 aa15.49■□□□□ 0.07
TRA2B-213ENST00000485530 IBTKQ9P2D0 1353 aaPredicted RBP15.49■□□□□ 0.07
TRA2B-213ENST00000485530 RNF123Q5XPI4 1314 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
TRA2B-213ENST00000485530 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 KAZALD1Q96I82 304 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
TRA2B-213ENST00000485530 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
TRA2B-213ENST00000485530 IRS4O14654 1257 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-213ENST00000485530 COL11A2P13942 1736 aaPredicted RBP15.47■□□□□ 0.07
TRA2B-213ENST00000485530 FER1L6Q2WGJ9 1857 aa15.47■□□□□ 0.07
TRA2B-213ENST00000485530 EPHA10Q5JZY3 1008 aa15.47■□□□□ 0.07
TRA2B-213ENST00000485530 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
TRA2B-213ENST00000485530 DPY19L2Q6NUT2 758 aa15.47■□□□□ 0.07
TRA2B-213ENST00000485530 C2CD5Q86YS7 1000 aa15.47■□□□□ 0.07
TRA2B-213ENST00000485530 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
TRA2B-213ENST00000485530 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
TRA2B-213ENST00000485530 UTYO14607 1347 aa15.46■□□□□ 0.07
TRA2B-213ENST00000485530 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.07
TRA2B-213ENST00000485530 GRM8O00222 908 aa15.46■□□□□ 0.07
TRA2B-213ENST00000485530 CCT4P50991 539 aaKnown RBP15.46■□□□□ 0.07
TRA2B-213ENST00000485530 ST5P78524 1137 aa15.46■□□□□ 0.07
TRA2B-213ENST00000485530 NPHP1O15259 732 aa15.45■□□□□ 0.06
TRA2B-213ENST00000485530 SRGNP10124 158 aa15.45■□□□□ 0.06
TRA2B-213ENST00000485530 FOXO4P98177 505 aa15.45■□□□□ 0.06
TRA2B-213ENST00000485530 CRY2Q49AN0 593 aa15.45■□□□□ 0.06
TRA2B-213ENST00000485530 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
TRA2B-213ENST00000485530 CDHR2Q9BYE9 1310 aa15.44■□□□□ 0.06
TRA2B-213ENST00000485530 H0YIN7 160 aa15.44■□□□□ 0.06
TRA2B-213ENST00000485530 ZBTB7BO15156 539 aaPredicted RBP15.44■□□□□ 0.06
TRA2B-213ENST00000485530 PDE6BP35913 854 aa15.44■□□□□ 0.06
TRA2B-213ENST00000485530 RRP1P56182 461 aaKnown RBP15.44■□□□□ 0.06
TRA2B-213ENST00000485530 SUCLG2Q96I99 432 aa15.44■□□□□ 0.06
TRA2B-213ENST00000485530 MEIS3Q99687 375 aa15.44■□□□□ 0.06
TRA2B-213ENST00000485530 C9orf78Q9NZ63 289 aaPredicted RBP15.44■□□□□ 0.06
TRA2B-213ENST00000485530 PASKQ96RG2 1323 aa15.43■□□□□ 0.06
TRA2B-213ENST00000485530 CTCFP49711 727 aaPredicted RBP15.43■□□□□ 0.06
TRA2B-213ENST00000485530 SF3B3Q15393 1217 aaKnown RBP15.43■□□□□ 0.06
TRA2B-213ENST00000485530 TTLL11Q8NHH1 800 aa15.43■□□□□ 0.06
TRA2B-213ENST00000485530 NLRP3Q96P20 1036 aa15.43■□□□□ 0.06
TRA2B-213ENST00000485530 PLA2G12BQ9BX93 195 aa15.43■□□□□ 0.06
TRA2B-213ENST00000485530 LTBP3Q9NS15 1303 aa15.43■□□□□ 0.06
TRA2B-213ENST00000485530 PDE8AO60658 829 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 CSF1RP07333 972 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 HOXA10P31260 410 aaPredicted RBP15.42■□□□□ 0.06
TRA2B-213ENST00000485530 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 SLC51AQ86UW1 340 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 AIDAQ96BJ3 306 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 RIC1Q4ADV7 1423 aa15.42■□□□□ 0.06
TRA2B-213ENST00000485530 C21orf2O43822 256 aa15.41■□□□□ 0.06
TRA2B-213ENST00000485530 DDNO94850 711 aaPredicted RBP15.41■□□□□ 0.06
TRA2B-213ENST00000485530 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
TRA2B-213ENST00000485530 CCDC85AQ96PX6 553 aaPredicted RBP15.41■□□□□ 0.06
TRA2B-213ENST00000485530 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
TRA2B-213ENST00000485530 VEGFBP49765 207 aa15.4■□□□□ 0.06
TRA2B-213ENST00000485530 CTSWP56202 376 aa15.4■□□□□ 0.06
TRA2B-213ENST00000485530 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
TRA2B-213ENST00000485530 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
TRA2B-213ENST00000485530 ZNF622Q969S3 477 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■□□□□ 11.1
TRA2B-213ENST00000485530 SEC31BQ9NQW1 1179 aa15.4■□□□□ 0.06
TRA2B-213ENST00000485530 WBP1LQ9NX94 342 aa15.4■□□□□ 0.06
TRA2B-213ENST00000485530 NPR1P16066 1061 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 LBX1P52954 281 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
TRA2B-213ENST00000485530 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 LMBR1LQ6UX01 489 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 LDHDQ86WU2 507 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 ITPRIPQ8IWB1 547 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
TRA2B-213ENST00000485530 MASTLQ96GX5 879 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 TAOK3Q9H2K8 898 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
TRA2B-213ENST00000485530 GREM2Q9H772 168 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 DDX60Q8IY21 1712 aaKnown RBP15.39■□□□□ 0.05
TRA2B-213ENST00000485530 ADAMTSL1Q8N6G6 1762 aa15.39■□□□□ 0.05
TRA2B-213ENST00000485530 SCN4AP35499 1836 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 COL4A1P02462 1669 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 CACNA1SQ13698 1873 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 MS4A1P11836 297 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 RABL6Q3YEC7 729 aaPredicted RBP15.38■□□□□ 0.05
TRA2B-213ENST00000485530 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 CRAMP1Q96RY5 1269 aa15.38■□□□□ 0.05
TRA2B-213ENST00000485530 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms