RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
SQSTM1-208ENST00000485412 VPS33BQ9H267 617 aa18.17■□□□□ 0.5
SQSTM1-208ENST00000485412 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
SQSTM1-208ENST00000485412 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
SQSTM1-208ENST00000485412 DUOX1Q9NRD9 1551 aa18.17■□□□□ 0.5
SQSTM1-208ENST00000485412 LRRC37AA6NMS7 1700 aa18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 SLC34A2O95436 690 aa18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 MLLT1Q03111 559 aaPredicted RBP18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 CXCL9Q07325 125 aa18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 CASP8AP2Q9UKL3 1982 aa18.16■□□□□ 0.5
SQSTM1-208ENST00000485412 GMPSP49915 693 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-208ENST00000485412 DDX10Q13206 875 aaKnown RBP18.15■□□□□ 0.5
SQSTM1-208ENST00000485412 RALBP1Q15311 655 aa18.15■□□□□ 0.5
SQSTM1-208ENST00000485412 SLC10A5Q5PT55 438 aa18.15■□□□□ 0.5
SQSTM1-208ENST00000485412 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
SQSTM1-208ENST00000485412 ZNF408Q9H9D4 720 aa18.15■□□□□ 0.5
SQSTM1-208ENST00000485412 CA12O43570 354 aa18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 CIAPIN1Q6FI81 312 aa18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 DPP8Q6V1X1 898 aaPredicted RBP18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 SAPCD2Q86UD0 394 aa18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 GLIS2Q9BZE0 524 aaPredicted RBP18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
SQSTM1-208ENST00000485412 CHL1O00533 1208 aa18.13■□□□□ 0.49
SQSTM1-208ENST00000485412 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-208ENST00000485412 BBOX1O75936 387 aa18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 TNIP1Q15025 636 aa18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 MPNDQ8N594 471 aa18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 HHIPL1Q96JK4 782 aa18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 RTFDC1Q9BY42 306 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 CDHR2Q9BYE9 1310 aa18.12■□□□□ 0.49
SQSTM1-208ENST00000485412 RAD17O75943 681 aa18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 BRPF1P55201 1214 aaPredicted RBP18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 TCIRG1Q13488 830 aa18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 SP8Q8IXZ3 490 aa18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
SQSTM1-208ENST00000485412 RGS19P49795 217 aa18.1■□□□□ 0.49
SQSTM1-208ENST00000485412 HSP90AB3PQ58FF7 597 aa18.1■□□□□ 0.49
SQSTM1-208ENST00000485412 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-208ENST00000485412 ZC3H15Q8WU90 426 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-208ENST00000485412 MCOLN1Q9GZU1 580 aa18.1■□□□□ 0.49
SQSTM1-208ENST00000485412 PGAP2Q9UHJ9 254 aa18.1■□□□□ 0.49
SQSTM1-208ENST00000485412 SHTN1A0MZ66 631 aa18.09■□□□□ 0.49
SQSTM1-208ENST00000485412 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
SQSTM1-208ENST00000485412 TRPM4Q8TD43 1214 aa18.09■□□□□ 0.49
SQSTM1-208ENST00000485412 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
SQSTM1-208ENST00000485412 SH3TC1Q8TE82 1336 aa18.08■□□□□ 0.49
SQSTM1-208ENST00000485412 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.48
SQSTM1-208ENST00000485412 H7C1D1 291 aa18.08■□□□□ 0.48
SQSTM1-208ENST00000485412 HIRAP54198 1017 aaPredicted RBP18.08■□□□□ 0.48
SQSTM1-208ENST00000485412 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
SQSTM1-208ENST00000485412 CNOT7Q9UIV1 285 aaKnown RBP18.08■□□□□ 0.48
SQSTM1-208ENST00000485412 YDJCA8MPS7 323 aa18.07■□□□□ 0.48
SQSTM1-208ENST00000485412 DGKZQ13574 1117 aa18.07■□□□□ 0.48
SQSTM1-208ENST00000485412 GRAPQ13588 217 aa18.07■□□□□ 0.48
SQSTM1-208ENST00000485412 RTL5Q5HYW3 569 aaPredicted RBP18.07■□□□□ 0.48
SQSTM1-208ENST00000485412 HDGFL1Q5TGJ6 251 aa18.07■□□□□ 0.48
SQSTM1-208ENST00000485412 GRAPLQ8TC17 118 aaPredicted RBP18.07■□□□□ 0.48
SQSTM1-208ENST00000485412 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 SCN9AQ15858 1988 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 HUNKP57058 714 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 NOGQ13253 232 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 USP48Q86UV5 1035 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 MICALL2Q8IY33 904 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 FAM89AQ96GI7 184 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 ISCA1Q9BUE6 129 aa18.06■□□□□ 0.48
SQSTM1-208ENST00000485412 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
SQSTM1-208ENST00000485412 TMC4Q7Z404 712 aa18.05■□□□□ 0.48
SQSTM1-208ENST00000485412 PLBD2Q8NHP8 589 aa18.05■□□□□ 0.48
SQSTM1-208ENST00000485412 CELF1Q92879 486 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-208ENST00000485412 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
SQSTM1-208ENST00000485412 MBIPQ9NS73 344 aa18.04■□□□□ 0.48
SQSTM1-208ENST00000485412 DLK2Q6UY11 383 aa18.03■□□□□ 0.48
SQSTM1-208ENST00000485412 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
SQSTM1-208ENST00000485412 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
SQSTM1-208ENST00000485412 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 PSMD14O00487 310 aa18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 WASHC4Q2M389 1173 aa18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 SAMD7Q7Z3H4 446 aa18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 DPF2Q92785 391 aa18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 ZIC5Q96T25 663 aa18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 DBF4Q9UBU7 674 aaPredicted RBP18.02■□□□□ 0.48
SQSTM1-208ENST00000485412 SPEF2Q9C093 1822 aa18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 TBC1D10BQ4KMP7 808 aaPredicted RBP18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 RGMBQ6NW40 437 aa18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 KRT26Q7Z3Y9 468 aa18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 DBNDD1Q9H9R9 158 aa18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 KCNQ5Q9NR82 932 aa18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 NSFL1CQ9UNZ2 370 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-208ENST00000485412 C6orf229H3BNL8 230 aa18■□□□□ 0.47
SQSTM1-208ENST00000485412 ELL2O00472 640 aaPredicted RBP18■□□□□ 0.47
SQSTM1-208ENST00000485412 RIMBP2O15034 1052 aa18■□□□□ 0.47
SQSTM1-208ENST00000485412 EGFRP00533 1210 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms