RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 PTPN12Q05209 780 aaKnown RBP21.63■■□□□ 1.05
CCDC78-214ENST00000485091 G3BP1Q13283 466 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCDC78-214ENST00000485091 CCDC57Q2TAC2 916 aa21.63■■□□□ 1.05
CCDC78-214ENST00000485091 ZNF594Q96JF6 807 aaPredicted RBP21.63■■□□□ 1.05
CCDC78-214ENST00000485091 LRRCC1Q9C099 1032 aa21.63■■□□□ 1.05
CCDC78-214ENST00000485091 CARMIL3Q8ND23 1372 aa21.63■■□□□ 1.05
CCDC78-214ENST00000485091 MSL1Q68DK7 614 aa21.63■■□□□ 1.05
CCDC78-214ENST00000485091 PELP1Q8IZL8 1130 aaKnown RBP21.63■■□□□ 1.05
CCDC78-214ENST00000485091 GREM2Q9H772 168 aa21.63■■□□□ 1.05
CCDC78-214ENST00000485091 NOP58Q9Y2X3 529 aaKnown RBP21.63■■□□□ 1.05
CCDC78-214ENST00000485091 RAB11FIP3O75154 756 aa21.62■■□□□ 1.05
CCDC78-214ENST00000485091 TM4SF1P30408 202 aa21.62■■□□□ 1.05
CCDC78-214ENST00000485091 HSP90AB4PQ58FF6 505 aa21.62■■□□□ 1.05
CCDC78-214ENST00000485091 C16orf71Q8IYS4 520 aaPredicted RBP21.62■■□□□ 1.05
CCDC78-214ENST00000485091 IL1RAPL2Q9NP60 686 aa21.62■■□□□ 1.05
CCDC78-214ENST00000485091 COL24A1Q17RW2 1714 aa21.62■■□□□ 1.05
CCDC78-214ENST00000485091 IFIT5Q13325 482 aaKnown RBP21.61■■□□□ 1.05
CCDC78-214ENST00000485091 COPRSQ9NQ92 184 aa21.61■■□□□ 1.05
CCDC78-214ENST00000485091 ABCC12Q96J65 1359 aa21.61■■□□□ 1.05
CCDC78-214ENST00000485091 DDX60Q8IY21 1712 aaKnown RBP21.61■■□□□ 1.05
CCDC78-214ENST00000485091 SERPINB2P05120 415 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 HSP90B1P14625 803 aaKnown RBP21.6■■□□□ 1.05
CCDC78-214ENST00000485091 ITGA6P23229 1130 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 TAF7LQ5H9L4 462 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 RHPN1Q8TCX5 695 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 DDR1Q08345 913 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
CCDC78-214ENST00000485091 ANKRD18BA2A2Z9 1011 aa21.59■■□□□ 1.05
CCDC78-214ENST00000485091 C3orf67Q6ZVT6 689 aa21.59■■□□□ 1.05
CCDC78-214ENST00000485091 KIF1BPQ96EK5 621 aa21.59■■□□□ 1.05
CCDC78-214ENST00000485091 MYH3P11055 1940 aa21.58■■□□□ 1.05
CCDC78-214ENST00000485091 PSDA5PKW4 1024 aaPredicted RBP21.58■■□□□ 1.05
CCDC78-214ENST00000485091 SLC10A5Q5PT55 438 aa21.58■■□□□ 1.05
CCDC78-214ENST00000485091 POLRMTO00411 1230 aaKnown RBP21.58■■□□□ 1.04
CCDC78-214ENST00000485091 CCDC152Q4G0S7 254 aa21.58■■□□□ 1.04
CCDC78-214ENST00000485091 PRR5LQ6MZQ0 368 aa21.58■■□□□ 1.04
CCDC78-214ENST00000485091 ERC1Q8IUD2 1116 aa21.58■■□□□ 1.04
CCDC78-214ENST00000485091 OTUD7AQ8TE49 926 aaPredicted RBP21.58■■□□□ 1.04
CCDC78-214ENST00000485091 PDGFDQ9GZP0 370 aaPredicted RBP21.58■■□□□ 1.04
CCDC78-214ENST00000485091 SEC31BQ9NQW1 1179 aa21.58■■□□□ 1.04
CCDC78-214ENST00000485091 SASH1O94885 1247 aa21.57■■□□□ 1.04
CCDC78-214ENST00000485091 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
CCDC78-214ENST00000485091 LRRC24Q50LG9 513 aa21.57■■□□□ 1.04
CCDC78-214ENST00000485091 NLRP3Q96P20 1036 aa21.57■■□□□ 1.04
CCDC78-214ENST00000485091 PUS3Q9BZE2 481 aaKnown RBP21.57■■□□□ 1.04
CCDC78-214ENST00000485091 LAMB2P55268 1798 aa21.56■■□□□ 1.04
CCDC78-214ENST00000485091 MMP10P09238 476 aa21.55■■□□□ 1.04
CCDC78-214ENST00000485091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.55■■□□□ 1.04
CCDC78-214ENST00000485091 EYA2O00167 538 aa21.55■■□□□ 1.04
CCDC78-214ENST00000485091 ST5P78524 1137 aa21.55■■□□□ 1.04
CCDC78-214ENST00000485091 PARP3Q9Y6F1 533 aa21.55■■□□□ 1.04
CCDC78-214ENST00000485091 TFCP2Q12800 502 aa21.54■■□□□ 1.04
CCDC78-214ENST00000485091 SF3B3Q15393 1217 aaKnown RBP21.53■■□□□ 1.04
CCDC78-214ENST00000485091 LDHAL6AQ6ZMR3 332 aa21.53■■□□□ 1.04
CCDC78-214ENST00000485091 ATG9AQ7Z3C6 839 aa21.53■■□□□ 1.04
CCDC78-214ENST00000485091 CNNM1Q9NRU3 951 aa21.53■■□□□ 1.04
CCDC78-214ENST00000485091 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
CCDC78-214ENST00000485091 PLEKHM2Q8IWE5 1019 aa21.52■■□□□ 1.04
CCDC78-214ENST00000485091 CLASRPQ8N2M8 674 aaKnown RBP21.52■■□□□ 1.04
CCDC78-214ENST00000485091 IL15P40933 162 aaPredicted RBP21.52■■□□□ 1.03
CCDC78-214ENST00000485091 TNRC6CQ9HCJ0 1690 aaKnown RBP21.5■■□□□ 1.03
CCDC78-214ENST00000485091 CIAO1O76071 339 aa21.5■■□□□ 1.03
CCDC78-214ENST00000485091 AACSQ86V21 672 aa21.5■■□□□ 1.03
CCDC78-214ENST00000485091 MPHOSPH8Q99549 860 aa21.5■■□□□ 1.03
CCDC78-214ENST00000485091 CASZ1Q86V15 1759 aa21.5■■□□□ 1.03
CCDC78-214ENST00000485091 IGHMBP2P38935 993 aaKnown RBP21.49■■□□□ 1.03
CCDC78-214ENST00000485091 TSHZ3Q63HK5 1081 aa21.49■■□□□ 1.03
CCDC78-214ENST00000485091 CCDC8Q9H0W5 538 aaPredicted RBP21.49■■□□□ 1.03
CCDC78-214ENST00000485091 RTL9Q8NET4 1388 aa21.49■■□□□ 1.03
CCDC78-214ENST00000485091 IFIT2P09913 472 aaKnown RBP21.49■■□□□ 1.03
CCDC78-214ENST00000485091 EAF2Q96CJ1 260 aaPredicted RBP21.49■■□□□ 1.03
CCDC78-214ENST00000485091 CDC5LQ99459 802 aaKnown RBP21.49■■□□□ 1.03
CCDC78-214ENST00000485091 METTL24Q5JXM2 366 aa21.48■■□□□ 1.03
CCDC78-214ENST00000485091 CEP126Q9P2H0 1117 aa21.48■■□□□ 1.03
CCDC78-214ENST00000485091 FBXO3Q9UK99 471 aa21.48■■□□□ 1.03
CCDC78-214ENST00000485091 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
CCDC78-214ENST00000485091 MX1P20591 662 aa21.47■■□□□ 1.03
CCDC78-214ENST00000485091 PDE1AP54750 535 aa21.47■■□□□ 1.03
CCDC78-214ENST00000485091 TNNI3KQ59H18 835 aa21.47■■□□□ 1.03
CCDC78-214ENST00000485091 DDX46Q7L014 1031 aaKnown RBP21.47■■□□□ 1.03
CCDC78-214ENST00000485091 ANKRD18AQ8IVF6 992 aa21.47■■□□□ 1.03
CCDC78-214ENST00000485091 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
CCDC78-214ENST00000485091 FPGT-TNNI3KV9GXZ4 949 aa21.47■■□□□ 1.03
CCDC78-214ENST00000485091 COL4A1P02462 1669 aa21.47■■□□□ 1.03
CCDC78-214ENST00000485091 SALL3Q9BXA9 1300 aa21.46■■□□□ 1.03
CCDC78-214ENST00000485091 TLR7Q9NYK1 1049 aaKnown RBP21.46■■□□□ 1.03
CCDC78-214ENST00000485091 TAF1P21675 1872 aa21.46■■□□□ 1.03
CCDC78-214ENST00000485091 SPEF2Q9C093 1822 aa21.45■■□□□ 1.02
CCDC78-214ENST00000485091 HELBQ8NG08 1087 aaPredicted RBP21.45■■□□□ 1.02
CCDC78-214ENST00000485091 RPGRQ92834 1020 aaKnown RBP21.45■■□□□ 1.02
CCDC78-214ENST00000485091 NEUROD6Q96NK8 337 aa21.45■■□□□ 1.02
CCDC78-214ENST00000485091 ZBTB7AO95365 584 aa21.44■■□□□ 1.02
CCDC78-214ENST00000485091 SLC16A10Q8TF71 515 aa21.44■■□□□ 1.02
CCDC78-214ENST00000485091 TIMM10P62072 90 aa21.43■■□□□ 1.02
CCDC78-214ENST00000485091 BRIP1Q9BX63 1249 aa21.43■■□□□ 1.02
CCDC78-214ENST00000485091 RIC1Q4ADV7 1423 aa21.43■■□□□ 1.02
CCDC78-214ENST00000485091 NRXN2Q9P2S2 1712 aa21.43■■□□□ 1.02
CCDC78-214ENST00000485091 RPS8P62241 208 aaKnown RBP21.43■■□□□ 1.02
CCDC78-214ENST00000485091 TTC22Q5TAA0 569 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms