RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.38□□□□□ -1.07
VPS8-223ENST00000485024 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
VPS8-223ENST00000485024 HMX2A2RU54 273 aa8.37□□□□□ -1.07
VPS8-223ENST00000485024 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
VPS8-223ENST00000485024 RNF43Q68DV7 783 aa8.37□□□□□ -1.07
VPS8-223ENST00000485024 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
VPS8-223ENST00000485024 GPLD1P80108 840 aa8.36□□□□□ -1.07
VPS8-223ENST00000485024 SETDB1Q15047 1291 aa8.36□□□□□ -1.07
VPS8-223ENST00000485024 SPOCD1Q6ZMY3 1216 aa8.36□□□□□ -1.07
VPS8-223ENST00000485024 CBLL1Q75N03 491 aa8.36□□□□□ -1.07
VPS8-223ENST00000485024 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
VPS8-223ENST00000485024 ALDH16A1Q8IZ83 802 aa8.35□□□□□ -1.07
VPS8-223ENST00000485024 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
VPS8-223ENST00000485024 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
VPS8-223ENST00000485024 KRT25Q7Z3Z0 450 aa8.34□□□□□ -1.07
VPS8-223ENST00000485024 WISP1O95388 367 aa8.33□□□□□ -1.08
VPS8-223ENST00000485024 SHKBP1Q8TBC3 707 aa8.33□□□□□ -1.08
VPS8-223ENST00000485024 DMGDHQ9UI17 866 aaKnown RBP8.33□□□□□ -1.08
VPS8-223ENST00000485024 CHMP3Q9Y3E7 222 aa8.33□□□□□ -1.08
VPS8-223ENST00000485024 IER5Q5VY09 327 aa8.32□□□□□ -1.08
VPS8-223ENST00000485024 UTP4Q969X6 686 aaKnown RBP8.32□□□□□ -1.08
VPS8-223ENST00000485024 ASIC4Q96FT7 647 aa8.32□□□□□ -1.08
VPS8-223ENST00000485024 IFT43Q96FT9 208 aa8.32□□□□□ -1.08
VPS8-223ENST00000485024 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
VPS8-223ENST00000485024 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
VPS8-223ENST00000485024 ITGB5P18084 799 aa8.31□□□□□ -1.08
VPS8-223ENST00000485024 EIF2AK2P19525 551 aaKnown RBP8.31□□□□□ -1.08
VPS8-223ENST00000485024 TARSP26639 723 aaKnown RBP8.31□□□□□ -1.08
VPS8-223ENST00000485024 SEMA3FQ13275 785 aa8.31□□□□□ -1.08
VPS8-223ENST00000485024 NCOA4Q13772 614 aa8.31□□□□□ -1.08
VPS8-223ENST00000485024 IL22RA1Q8N6P7 574 aa8.31□□□□□ -1.08
VPS8-223ENST00000485024 FAM46AQ96IP4 442 aaKnown RBP8.31□□□□□ -1.08
VPS8-223ENST00000485024 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
VPS8-223ENST00000485024 C21orf2O43822 256 aa8.3□□□□□ -1.08
VPS8-223ENST00000485024 SKIP12755 728 aa8.3□□□□□ -1.08
VPS8-223ENST00000485024 GDF6Q6KF10 455 aaPredicted RBP8.3□□□□□ -1.08
VPS8-223ENST00000485024 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
VPS8-223ENST00000485024 COL19A1Q14993 1142 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 HIF1AQ16665 826 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 UVSSAQ2YD98 709 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 PLD4Q96BZ4 506 aa8.29□□□□□ -1.08
VPS8-223ENST00000485024 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
VPS8-223ENST00000485024 PPP1R12BO60237 982 aaPredicted RBP8.28□□□□□ -1.08
VPS8-223ENST00000485024 MAP4K3Q8IVH8 894 aa8.28□□□□□ -1.08
VPS8-223ENST00000485024 GALNT11Q8NCW6 608 aa8.28□□□□□ -1.08
VPS8-223ENST00000485024 MYRFLQ96LU7 910 aa8.28□□□□□ -1.08
VPS8-223ENST00000485024 CEP41Q9BYV8 373 aa8.28□□□□□ -1.08
VPS8-223ENST00000485024 ZBTB7BO15156 539 aaPredicted RBP8.27□□□□□ -1.09
VPS8-223ENST00000485024 RARAP10276 462 aa8.27□□□□□ -1.09
VPS8-223ENST00000485024 NRLP54845 237 aa8.27□□□□□ -1.09
VPS8-223ENST00000485024 ZNF648Q5T619 568 aaPredicted RBP8.27□□□□□ -1.09
VPS8-223ENST00000485024 KRTAP5-3Q6L8H2 238 aa8.27□□□□□ -1.09
VPS8-223ENST00000485024 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
VPS8-223ENST00000485024 LZTS3O60299 673 aaPredicted RBP8.26□□□□□ -1.09
VPS8-223ENST00000485024 SASH3O75995 380 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
VPS8-223ENST00000485024 INPP5BP32019 993 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 ZNF124Q15973 351 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 ACAD11Q709F0 780 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 DEPDC4Q8N2C3 294 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 KCNK4Q9NYG8 393 aa8.26□□□□□ -1.09
VPS8-223ENST00000485024 ANGEL1Q9UNK9 670 aaKnown RBP8.26□□□□□ -1.09
VPS8-223ENST00000485024 J3QW42 95 aa8.25□□□□□ -1.09
VPS8-223ENST00000485024 C2orf49Q9BVC5 232 aaPredicted RBP8.25□□□□□ -1.09
VPS8-223ENST00000485024 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 EPB42P16452 691 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 JUNBP17275 347 aaPredicted RBP8.24□□□□□ -1.09
VPS8-223ENST00000485024 SOX11P35716 441 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 CLEC10AQ8IUN9 316 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 FAM20CQ8IXL6 584 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 COL26A1Q96A83 441 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 FAM83CQ9BQN1 747 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 CCDC39Q9UFE4 941 aa8.24□□□□□ -1.09
VPS8-223ENST00000485024 DBX1A6NMT0 343 aa8.23□□□□□ -1.09
VPS8-223ENST00000485024 TM4SF5O14894 197 aa8.23□□□□□ -1.09
VPS8-223ENST00000485024 CCDC102BQ68D86 513 aa8.23□□□□□ -1.09
VPS8-223ENST00000485024 TSEN2Q8NCE0 465 aaKnown RBP8.23□□□□□ -1.09
VPS8-223ENST00000485024 GDPD2Q9HCC8 539 aa8.23□□□□□ -1.09
VPS8-223ENST00000485024 PIM2Q9P1W9 311 aa8.23□□□□□ -1.09
VPS8-223ENST00000485024 TRIM33Q9UPN9 1127 aa8.23□□□□□ -1.09
VPS8-223ENST00000485024 ABL2P42684 1182 aa8.22□□□□□ -1.09
VPS8-223ENST00000485024 IDH3AP50213 366 aa8.22□□□□□ -1.09
VPS8-223ENST00000485024 CLDN10P78369 228 aa8.22□□□□□ -1.09
VPS8-223ENST00000485024 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
VPS8-223ENST00000485024 KIAA1211Q6ZU35 1233 aa8.22□□□□□ -1.09
VPS8-223ENST00000485024 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
VPS8-223ENST00000485024 USP17L5A8MUK1 530 aa8.21□□□□□ -1.1
VPS8-223ENST00000485024 M0R2N6 131 aa8.21□□□□□ -1.1
VPS8-223ENST00000485024 RTN1Q16799 776 aa8.21□□□□□ -1.1
VPS8-223ENST00000485024 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
VPS8-223ENST00000485024 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
VPS8-223ENST00000485024 LOC102724428A0A0B4J2F2 783 aa8.2□□□□□ -1.1
VPS8-223ENST00000485024 PRNPP04156 253 aa8.2□□□□□ -1.1
VPS8-223ENST00000485024 SIK1P57059 783 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms