RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 NLGN1Q8N2Q7 840 aa25.33■■□□□ 1.65
VCPKMT-203ENST00000484763 LRRCC1Q9C099 1032 aa25.33■■□□□ 1.65
VCPKMT-203ENST00000484763 PTPN12Q05209 780 aaKnown RBP25.33■■□□□ 1.64
VCPKMT-203ENST00000484763 FAM161AQ3B820 660 aa25.33■■□□□ 1.64
VCPKMT-203ENST00000484763 UPF1Q92900 1129 aaKnown RBP eCLIP25.33■■□□□ 1.64
VCPKMT-203ENST00000484763 ABCC12Q96J65 1359 aa25.32■■□□□ 1.64
VCPKMT-203ENST00000484763 RGS3P49796 1198 aa25.32■■□□□ 1.64
VCPKMT-203ENST00000484763 OS9Q13438 667 aaPredicted RBP25.32■■□□□ 1.64
VCPKMT-203ENST00000484763 CCDC57Q2TAC2 916 aa25.32■■□□□ 1.64
VCPKMT-203ENST00000484763 KLHDC4Q8TBB5 520 aa25.32■■□□□ 1.64
VCPKMT-203ENST00000484763 NPHP1O15259 732 aa25.31■■□□□ 1.64
VCPKMT-203ENST00000484763 SLC10A5Q5PT55 438 aa25.31■■□□□ 1.64
VCPKMT-203ENST00000484763 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
VCPKMT-203ENST00000484763 G3BP1Q13283 466 aaKnown RBP eCLIP25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 IFIT5Q13325 482 aaKnown RBP25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 CNBD1Q8NA66 436 aa25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 CCDC85AQ96PX6 553 aaPredicted RBP25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 KIF1BPQ96EK5 621 aa25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 SIL1Q9H173 461 aa25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 GREM2Q9H772 168 aa25.3■■□□□ 1.64
VCPKMT-203ENST00000484763 SMARCA5O60264 1052 aaPredicted RBP25.29■■□□□ 1.64
VCPKMT-203ENST00000484763 PDE4AP27815 886 aa25.29■■□□□ 1.64
VCPKMT-203ENST00000484763 CCDC152Q4G0S7 254 aa25.29■■□□□ 1.64
VCPKMT-203ENST00000484763 RHPN1Q8TCX5 695 aa25.29■■□□□ 1.64
VCPKMT-203ENST00000484763 RIC1Q4ADV7 1423 aa25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 RTL9Q8NET4 1388 aa25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 POLRMTO00411 1230 aaKnown RBP25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 ITGA6P23229 1130 aa25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 DDR1Q08345 913 aa25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 NRXN2Q9P2S2 1712 aa25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 SERPINB2P05120 415 aa25.28■■□□□ 1.64
VCPKMT-203ENST00000484763 TNRC6CQ9HCJ0 1690 aaKnown RBP25.27■■□□□ 1.64
VCPKMT-203ENST00000484763 ANKRD18BA2A2Z9 1011 aa25.27■■□□□ 1.64
VCPKMT-203ENST00000484763 TAF7LQ5H9L4 462 aa25.27■■□□□ 1.64
VCPKMT-203ENST00000484763 PRR5LQ6MZQ0 368 aa25.26■■□□□ 1.63
VCPKMT-203ENST00000484763 LRP5O75197 1615 aa25.26■■□□□ 1.63
VCPKMT-203ENST00000484763 ST5P78524 1137 aa25.26■■□□□ 1.63
VCPKMT-203ENST00000484763 SF3B3Q15393 1217 aaKnown RBP25.26■■□□□ 1.63
VCPKMT-203ENST00000484763 ZNF594Q96JF6 807 aaPredicted RBP25.26■■□□□ 1.63
VCPKMT-203ENST00000484763 NLRP3Q96P20 1036 aa25.25■■□□□ 1.63
VCPKMT-203ENST00000484763 FBXO3Q9UK99 471 aa25.25■■□□□ 1.63
VCPKMT-203ENST00000484763 EYA2O00167 538 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 CIAO1O76071 339 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 SASH1O94885 1247 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 MSL1Q68DK7 614 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 C3orf67Q6ZVT6 689 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 BCL11AQ9H165 835 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 IL1RAPL2Q9NP60 686 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 CCDC24Q8N4L8 307 aa25.23■■□□□ 1.63
VCPKMT-203ENST00000484763 MMP10P09238 476 aa25.22■■□□□ 1.63
VCPKMT-203ENST00000484763 IL15P40933 162 aaPredicted RBP25.22■■□□□ 1.63
VCPKMT-203ENST00000484763 PARP3Q9Y6F1 533 aa25.22■■□□□ 1.63
VCPKMT-203ENST00000484763 SPEF2Q9C093 1822 aa25.21■■□□□ 1.63
VCPKMT-203ENST00000484763 ATG9AQ7Z3C6 839 aa25.21■■□□□ 1.63
VCPKMT-203ENST00000484763 CLASRPQ8N2M8 674 aaKnown RBP25.21■■□□□ 1.63
VCPKMT-203ENST00000484763 LRRC24Q50LG9 513 aa25.2■■□□□ 1.62
VCPKMT-203ENST00000484763 C16orf71Q8IYS4 520 aaPredicted RBP25.2■■□□□ 1.62
VCPKMT-203ENST00000484763 SEC31BQ9NQW1 1179 aa25.2■■□□□ 1.62
VCPKMT-203ENST00000484763 CDC5LQ99459 802 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-203ENST00000484763 PUS3Q9BZE2 481 aaKnown RBP25.19■■□□□ 1.62
VCPKMT-203ENST00000484763 LDHAL6AQ6ZMR3 332 aa25.19■■□□□ 1.62
VCPKMT-203ENST00000484763 PLEKHM2Q8IWE5 1019 aa25.19■■□□□ 1.62
VCPKMT-203ENST00000484763 OTUD7AQ8TE49 926 aaPredicted RBP25.19■■□□□ 1.62
VCPKMT-203ENST00000484763 SLC16A10Q8TF71 515 aa25.19■■□□□ 1.62
VCPKMT-203ENST00000484763 ANKRD31Q8N7Z5 1873 aa25.18■■□□□ 1.62
VCPKMT-203ENST00000484763 PDGFDQ9GZP0 370 aaPredicted RBP25.18■■□□□ 1.62
VCPKMT-203ENST00000484763 TFCP2Q12800 502 aa25.17■■□□□ 1.62
VCPKMT-203ENST00000484763 CNNM1Q9NRU3 951 aa25.17■■□□□ 1.62
VCPKMT-203ENST00000484763 SALL3Q9BXA9 1300 aa25.17■■□□□ 1.62
VCPKMT-203ENST00000484763 IGHMBP2P38935 993 aaKnown RBP25.16■■□□□ 1.62
VCPKMT-203ENST00000484763 TAF1P21675 1872 aa25.16■■□□□ 1.62
VCPKMT-203ENST00000484763 MPHOSPH8Q99549 860 aa25.16■■□□□ 1.62
VCPKMT-203ENST00000484763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.16■■□□□ 1.62
VCPKMT-203ENST00000484763 COL4A1P02462 1669 aa25.15■■□□□ 1.62
VCPKMT-203ENST00000484763 MX1P20591 662 aa25.15■■□□□ 1.62
VCPKMT-203ENST00000484763 RIPOR2Q9Y4F9 1068 aa25.15■■□□□ 1.62
VCPKMT-203ENST00000484763 AACSQ86V21 672 aa25.14■■□□□ 1.62
VCPKMT-203ENST00000484763 ANKRD18AQ8IVF6 992 aa25.14■■□□□ 1.62
VCPKMT-203ENST00000484763 IFIT2P09913 472 aaKnown RBP25.14■■□□□ 1.61
VCPKMT-203ENST00000484763 CRY2Q49AN0 593 aa25.14■■□□□ 1.61
VCPKMT-203ENST00000484763 DDX46Q7L014 1031 aaKnown RBP25.14■■□□□ 1.61
VCPKMT-203ENST00000484763 GPR108Q9NPR9 543 aa25.14■■□□□ 1.61
VCPKMT-203ENST00000484763 CEP126Q9P2H0 1117 aa25.14■■□□□ 1.61
VCPKMT-203ENST00000484763 PDE1AP54750 535 aa25.13■■□□□ 1.61
VCPKMT-203ENST00000484763 TNNI3KQ59H18 835 aa25.13■■□□□ 1.61
VCPKMT-203ENST00000484763 EAF2Q96CJ1 260 aaPredicted RBP25.13■■□□□ 1.61
VCPKMT-203ENST00000484763 BRIP1Q9BX63 1249 aa25.13■■□□□ 1.61
VCPKMT-203ENST00000484763 OSBPL3Q9H4L5 887 aa25.13■■□□□ 1.61
VCPKMT-203ENST00000484763 FPGT-TNNI3KV9GXZ4 949 aa25.13■■□□□ 1.61
VCPKMT-203ENST00000484763 METTL24Q5JXM2 366 aa25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 MROH5Q6ZUA9 1318 aa25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 ZNF609O15014 1411 aa25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 AOX1Q06278 1338 aa25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 KLRG2A4D1S0 409 aaPredicted RBP25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 RPGRQ92834 1020 aaKnown RBP25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 STAP2Q9UGK3 403 aa25.12■■□□□ 1.61
VCPKMT-203ENST00000484763 CELF1Q92879 486 aaKnown RBP25.11■■□□□ 1.61
VCPKMT-203ENST00000484763 A0A1B0GUL6 1792 aa25.11■■□□□ 1.61
VCPKMT-203ENST00000484763 GPATCH3Q96I76 525 aa25.1■■□□□ 1.61
VCPKMT-203ENST00000484763 AKAP2Q9Y2D5 859 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms