RNA–Protein interactions for RNA: ENST00000484370.5

FGFR1-221, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-221ENST00000484370 FOXO4P98177 505 aa17.16■□□□□ 0.34
FGFR1-221ENST00000484370 TTLL11Q8NHH1 800 aa17.16■□□□□ 0.34
FGFR1-221ENST00000484370 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
FGFR1-221ENST00000484370 KAZALD1Q96I82 304 aa17.16■□□□□ 0.34
FGFR1-221ENST00000484370 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
FGFR1-221ENST00000484370 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
FGFR1-221ENST00000484370 CNKSR1Q969H4 720 aa17.15■□□□□ 0.34
FGFR1-221ENST00000484370 MYH3P11055 1940 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 ZBTB7BO15156 539 aaPredicted RBP17.14■□□□□ 0.33
FGFR1-221ENST00000484370 CSF1RP07333 972 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 GNAI3P08754 354 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 HOXA10P31260 410 aaPredicted RBP17.14■□□□□ 0.33
FGFR1-221ENST00000484370 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
FGFR1-221ENST00000484370 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
FGFR1-221ENST00000484370 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 BICC1Q9H694 974 aaKnown RBP17.14■□□□□ 0.33
FGFR1-221ENST00000484370 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
FGFR1-221ENST00000484370 DLEC1Q9Y238 1755 aa17.14■□□□□ 0.33
FGFR1-221ENST00000484370 DALRD3Q5D0E6 543 aaKnown RBP17.13■□□□□ 0.33
FGFR1-221ENST00000484370 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
FGFR1-221ENST00000484370 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
FGFR1-221ENST00000484370 GREM2Q9H772 168 aa17.13■□□□□ 0.33
FGFR1-221ENST00000484370 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
FGFR1-221ENST00000484370 TAF1P21675 1872 aa17.12■□□□□ 0.33
FGFR1-221ENST00000484370 BRCA1P38398 1863 aaKnown RBP17.12■□□□□ 0.33
FGFR1-221ENST00000484370 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
FGFR1-221ENST00000484370 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
FGFR1-221ENST00000484370 DDX19BQ9UMR2 479 aa17.12■□□□□ 0.33
FGFR1-221ENST00000484370 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
FGFR1-221ENST00000484370 GNAI2P04899 355 aa17.11■□□□□ 0.33
FGFR1-221ENST00000484370 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
FGFR1-221ENST00000484370 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
FGFR1-221ENST00000484370 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
FGFR1-221ENST00000484370 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
FGFR1-221ENST00000484370 SLX4Q8IY92 1834 aa17.11■□□□□ 0.33
FGFR1-221ENST00000484370 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-221ENST00000484370 ITGA6P23229 1130 aa17.1■□□□□ 0.33
FGFR1-221ENST00000484370 GRAPQ13588 217 aa17.1■□□□□ 0.33
FGFR1-221ENST00000484370 GPR162Q16538 588 aa17.1■□□□□ 0.33
FGFR1-221ENST00000484370 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-221ENST00000484370 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-221ENST00000484370 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
FGFR1-221ENST00000484370 YBX3P16989 372 aaKnown RBP eCLIP17.09■□□□□ 0.33
FGFR1-221ENST00000484370 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
FGFR1-221ENST00000484370 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
FGFR1-221ENST00000484370 RTL9Q8NET4 1388 aa17.09■□□□□ 0.33
FGFR1-221ENST00000484370 COL4A1P02462 1669 aa17.08■□□□□ 0.32
FGFR1-221ENST00000484370 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
FGFR1-221ENST00000484370 PPEF1O14829 653 aaPredicted RBP17.08■□□□□ 0.32
FGFR1-221ENST00000484370 C21orf2O43822 256 aa17.08■□□□□ 0.32
FGFR1-221ENST00000484370 BBOX1O75936 387 aa17.08■□□□□ 0.32
FGFR1-221ENST00000484370 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
FGFR1-221ENST00000484370 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.32
FGFR1-221ENST00000484370 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.32
FGFR1-221ENST00000484370 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
FGFR1-221ENST00000484370 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
FGFR1-221ENST00000484370 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
FGFR1-221ENST00000484370 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
FGFR1-221ENST00000484370 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
FGFR1-221ENST00000484370 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
FGFR1-221ENST00000484370 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
FGFR1-221ENST00000484370 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
FGFR1-221ENST00000484370 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
FGFR1-221ENST00000484370 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
FGFR1-221ENST00000484370 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
FGFR1-221ENST00000484370 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
FGFR1-221ENST00000484370 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
FGFR1-221ENST00000484370 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
FGFR1-221ENST00000484370 ARFGEF1Q9Y6D6 1849 aa17.05■□□□□ 0.32
FGFR1-221ENST00000484370 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
FGFR1-221ENST00000484370 TMX4Q9H1E5 349 aaPredicted RBP17.04■□□□□ 0.32
FGFR1-221ENST00000484370 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 SRGAP3O43295 1099 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 RFX5P48382 616 aaPredicted RBP17.03■□□□□ 0.32
FGFR1-221ENST00000484370 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 MTX1Q13505 466 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 CCDC93Q567U6 631 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 TMC4Q7Z404 712 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 KLHDC4Q8TBB5 520 aa17.03■□□□□ 0.32
FGFR1-221ENST00000484370 BSDC1Q9NW68 430 aaPredicted RBP17.03■□□□□ 0.32
FGFR1-221ENST00000484370 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.32
FGFR1-221ENST00000484370 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
FGFR1-221ENST00000484370 SOGA3Q5TF21 947 aa17.02■□□□□ 0.32
FGFR1-221ENST00000484370 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
FGFR1-221ENST00000484370 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
FGFR1-221ENST00000484370 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
FGFR1-221ENST00000484370 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
FGFR1-221ENST00000484370 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
FGFR1-221ENST00000484370 PUS3Q9BZE2 481 aaKnown RBP17.01■□□□□ 0.31
FGFR1-221ENST00000484370 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
FGFR1-221ENST00000484370 PA2G4Q9UQ80 394 aaKnown RBP17.01■□□□□ 0.31
FGFR1-221ENST00000484370 GPSM2P81274 684 aa17■□□□□ 0.31
FGFR1-221ENST00000484370 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
FGFR1-221ENST00000484370 MPNDQ8N594 471 aa17■□□□□ 0.31
FGFR1-221ENST00000484370 MINPP1Q9UNW1 487 aa17■□□□□ 0.31
FGFR1-221ENST00000484370 NSFL1CQ9UNZ2 370 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms