RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 CRAMP1Q96RY5 1269 aa24.58■■□□□ 1.53
SNED1-210ENST00000483962 CTSWP56202 376 aa24.57■■□□□ 1.52
SNED1-210ENST00000483962 PRPF40BQ6NWY9 871 aaKnown RBP24.57■■□□□ 1.52
SNED1-210ENST00000483962 DZIP1LQ8IYY4 767 aaKnown RBP24.57■■□□□ 1.52
SNED1-210ENST00000483962 TMEM57Q8N5G2 664 aa24.57■■□□□ 1.52
SNED1-210ENST00000483962 COL4A1P02462 1669 aa24.56■■□□□ 1.52
SNED1-210ENST00000483962 ALDH1B1P30837 517 aa24.56■■□□□ 1.52
SNED1-210ENST00000483962 EPHA10Q5JZY3 1008 aa24.56■■□□□ 1.52
SNED1-210ENST00000483962 TTLL11Q8NHH1 800 aa24.56■■□□□ 1.52
SNED1-210ENST00000483962 FOXO4P98177 505 aa24.55■■□□□ 1.52
SNED1-210ENST00000483962 DDX46Q7L014 1031 aaKnown RBP24.55■■□□□ 1.52
SNED1-210ENST00000483962 KAZALD1Q96I82 304 aa24.55■■□□□ 1.52
SNED1-210ENST00000483962 SUCLG2Q96I99 432 aa24.55■■□□□ 1.52
SNED1-210ENST00000483962 CCDC85AQ96PX6 553 aaPredicted RBP24.55■■□□□ 1.52
SNED1-210ENST00000483962 CCDC152Q4G0S7 254 aa24.54■■□□□ 1.52
SNED1-210ENST00000483962 FTSJ3Q8IY81 847 aaKnown RBP24.54■■□□□ 1.52
SNED1-210ENST00000483962 PANK1Q8TE04 598 aa24.54■■□□□ 1.52
SNED1-210ENST00000483962 ZNF219Q9P2Y4 722 aaPredicted RBP24.54■■□□□ 1.52
SNED1-210ENST00000483962 CSF1RP07333 972 aa24.53■■□□□ 1.52
SNED1-210ENST00000483962 C7orf43Q8WVR3 580 aa24.53■■□□□ 1.52
SNED1-210ENST00000483962 MEIS3Q99687 375 aa24.53■■□□□ 1.52
SNED1-210ENST00000483962 SEC31BQ9NQW1 1179 aa24.53■■□□□ 1.52
SNED1-210ENST00000483962 DCAF8L1A6NGE4 600 aa24.52■■□□□ 1.52
SNED1-210ENST00000483962 C21orf2O43822 256 aa24.52■■□□□ 1.52
SNED1-210ENST00000483962 SLC51AQ86UW1 340 aa24.52■■□□□ 1.52
SNED1-210ENST00000483962 GREM2Q9H772 168 aa24.52■■□□□ 1.52
SNED1-210ENST00000483962 GRAPQ13588 217 aa24.51■■□□□ 1.51
SNED1-210ENST00000483962 GRAPLQ8TC17 118 aaPredicted RBP24.51■■□□□ 1.51
SNED1-210ENST00000483962 CELF1Q92879 486 aaKnown RBP24.51■■□□□ 1.51
SNED1-210ENST00000483962 RTL9Q8NET4 1388 aa24.51■■□□□ 1.51
SNED1-210ENST00000483962 GRIN3BO60391 1043 aa24.5■■□□□ 1.51
SNED1-210ENST00000483962 LMBR1LQ6UX01 489 aa24.5■■□□□ 1.51
SNED1-210ENST00000483962 OLFM4Q6UX06 510 aa24.5■■□□□ 1.51
SNED1-210ENST00000483962 PPEF1O14829 653 aaPredicted RBP24.49■■□□□ 1.51
SNED1-210ENST00000483962 UBTFL1P0CB47 393 aaPredicted RBP24.49■■□□□ 1.51
SNED1-210ENST00000483962 MS4A1P11836 297 aa24.49■■□□□ 1.51
SNED1-210ENST00000483962 FAM161AQ3B820 660 aa24.49■■□□□ 1.51
SNED1-210ENST00000483962 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.49■■□□□ 1.51
SNED1-210ENST00000483962 BICC1Q9H694 974 aaKnown RBP24.49■■□□□ 1.51
SNED1-210ENST00000483962 UTRNP46939 3433 aa24.48■■□□□ 1.51
SNED1-210ENST00000483962 BBOX1O75936 387 aa24.48■■□□□ 1.51
SNED1-210ENST00000483962 FER1L6Q2WGJ9 1857 aa24.48■■□□□ 1.51
SNED1-210ENST00000483962 C20orf194Q5TEA3 1177 aa24.48■■□□□ 1.51
SNED1-210ENST00000483962 ITPRIPQ8IWB1 547 aa24.48■■□□□ 1.51
SNED1-210ENST00000483962 ANKRD44Q8N8A2 993 aa24.48■■□□□ 1.51
SNED1-210ENST00000483962 SPEF2Q9C093 1822 aa24.47■■□□□ 1.51
SNED1-210ENST00000483962 ARHGAP27Q6ZUM4 889 aa24.47■■□□□ 1.51
SNED1-210ENST00000483962 GNAI3P08754 354 aa24.46■■□□□ 1.51
SNED1-210ENST00000483962 ITGA6P23229 1130 aa24.46■■□□□ 1.51
SNED1-210ENST00000483962 RPS8P62241 208 aaKnown RBP24.46■■□□□ 1.51
SNED1-210ENST00000483962 RABL6Q3YEC7 729 aaPredicted RBP24.46■■□□□ 1.51
SNED1-210ENST00000483962 CHMP3Q9Y3E7 222 aa24.46■■□□□ 1.51
SNED1-210ENST00000483962 LRRC37AA6NMS7 1700 aa24.45■■□□□ 1.5
SNED1-210ENST00000483962 RRP1P56182 461 aaKnown RBP24.45■■□□□ 1.5
SNED1-210ENST00000483962 PDE3AQ14432 1141 aa24.45■■□□□ 1.5
SNED1-210ENST00000483962 ATP6V0A2Q9Y487 856 aa24.45■■□□□ 1.5
SNED1-210ENST00000483962 LRRFIP2Q9Y608 721 aaKnown RBP24.45■■□□□ 1.5
SNED1-210ENST00000483962 SNED1Q8TER0 1413 aa24.44■■□□□ 1.5
SNED1-210ENST00000483962 ZBTB7BO15156 539 aaPredicted RBP24.44■■□□□ 1.5
SNED1-210ENST00000483962 SP8Q8IXZ3 490 aa24.44■■□□□ 1.5
SNED1-210ENST00000483962 COG6Q9Y2V7 657 aa24.44■■□□□ 1.5
SNED1-210ENST00000483962 NFKBIEO00221 500 aa24.43■■□□□ 1.5
SNED1-210ENST00000483962 CCDC93Q567U6 631 aa24.43■■□□□ 1.5
SNED1-210ENST00000483962 SOGA3Q5TF21 947 aa24.43■■□□□ 1.5
SNED1-210ENST00000483962 ANKRD18AQ8IVF6 992 aa24.43■■□□□ 1.5
SNED1-210ENST00000483962 CDC5LQ99459 802 aaKnown RBP24.43■■□□□ 1.5
SNED1-210ENST00000483962 ANKRD18BA2A2Z9 1011 aa24.42■■□□□ 1.5
SNED1-210ENST00000483962 IFIT5Q13325 482 aaKnown RBP24.42■■□□□ 1.5
SNED1-210ENST00000483962 MVPQ14764 893 aaKnown RBP24.42■■□□□ 1.5
SNED1-210ENST00000483962 TMC4Q7Z404 712 aa24.42■■□□□ 1.5
SNED1-210ENST00000483962 SBF1O95248 1867 aa24.42■■□□□ 1.5
SNED1-210ENST00000483962 RASSF7Q02833 373 aa24.41■■□□□ 1.5
SNED1-210ENST00000483962 CC2D2BQ6DHV5 1058 aa24.41■■□□□ 1.5
SNED1-210ENST00000483962 HDAC5Q9UQL6 1122 aa24.41■■□□□ 1.5
SNED1-210ENST00000483962 CHD4Q14839 1912 aa24.41■■□□□ 1.5
SNED1-210ENST00000483962 CCDC88AQ3V6T2 1871 aa24.41■■□□□ 1.5
SNED1-210ENST00000483962 GNAI2P04899 355 aa24.4■■□□□ 1.5
SNED1-210ENST00000483962 PRELPP51888 382 aa24.4■■□□□ 1.5
SNED1-210ENST00000483962 CCDC57Q2TAC2 916 aa24.4■■□□□ 1.5
SNED1-210ENST00000483962 ZNF594Q96JF6 807 aaPredicted RBP24.4■■□□□ 1.5
SNED1-210ENST00000483962 RTKN2Q8IZC4 609 aa24.39■■□□□ 1.49
SNED1-210ENST00000483962 BSDC1Q9NW68 430 aaPredicted RBP24.39■■□□□ 1.49
SNED1-210ENST00000483962 IGHMBP2P38935 993 aaKnown RBP24.38■■□□□ 1.49
SNED1-210ENST00000483962 DDX19BQ9UMR2 479 aa24.38■■□□□ 1.49
SNED1-210ENST00000483962 LTBP3Q9NS15 1303 aa24.37■■□□□ 1.49
SNED1-210ENST00000483962 TMX4Q9H1E5 349 aaPredicted RBP24.37■■□□□ 1.49
SNED1-210ENST00000483962 C1orf115Q9H7X2 142 aa24.37■■□□□ 1.49
SNED1-210ENST00000483962 LTBP1Q14766 1721 aa24.37■■□□□ 1.49
SNED1-210ENST00000483962 RFX5P48382 616 aaPredicted RBP24.36■■□□□ 1.49
SNED1-210ENST00000483962 GPSM2P81274 684 aa24.36■■□□□ 1.49
SNED1-210ENST00000483962 FKBP4Q02790 459 aaKnown RBP eCLIP24.36■■□□□ 1.49
SNED1-210ENST00000483962 MPNDQ8N594 471 aa24.36■■□□□ 1.49
SNED1-210ENST00000483962 TAOK3Q9H2K8 898 aa24.36■■□□□ 1.49
SNED1-210ENST00000483962 SUPT16HQ9Y5B9 1047 aaKnown RBP24.36■■□□□ 1.49
SNED1-210ENST00000483962 DUOX1Q9NRD9 1551 aa24.36■■□□□ 1.49
SNED1-210ENST00000483962 GRIPAP1Q4V328 841 aa24.35■■□□□ 1.49
SNED1-210ENST00000483962 TAF7LQ5H9L4 462 aa24.35■■□□□ 1.49
SNED1-210ENST00000483962 KLHDC4Q8TBB5 520 aa24.35■■□□□ 1.49
SNED1-210ENST00000483962 PSMD1Q99460 953 aa24.35■■□□□ 1.49
SNED1-210ENST00000483962 MPHOSPH8Q99549 860 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms