RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 HMMRO75330 724 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 ST5P78524 1137 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 SUCLG2Q96I99 432 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 PODXL2Q9NZ53 605 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.61
SHROOM4-204ENST00000483955 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 SERPINB2P05120 415 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 MTX1Q13505 466 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 CEP85Q6P2H3 762 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 DDX60Q8IY21 1712 aaKnown RBP11.26□□□□□ -0.61
SHROOM4-204ENST00000483955 MYH3P11055 1940 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 MMP10P09238 476 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 CTSWP56202 376 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 DDR1Q08345 913 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 CCDC136Q96JN2 1154 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 PCDHB15Q9Y5E8 787 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
SHROOM4-204ENST00000483955 POLD1P28340 1107 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 CCDC152Q4G0S7 254 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 PRR5LQ6MZQ0 368 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
SHROOM4-204ENST00000483955 SRGAP3O43295 1099 aa11.23□□□□□ -0.61
SHROOM4-204ENST00000483955 FOXO4P98177 505 aa11.23□□□□□ -0.61
SHROOM4-204ENST00000483955 LMBR1LQ6UX01 489 aa11.23□□□□□ -0.61
SHROOM4-204ENST00000483955 JARID2Q92833 1246 aaPredicted RBP11.23□□□□□ -0.61
SHROOM4-204ENST00000483955 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
SHROOM4-204ENST00000483955 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
SHROOM4-204ENST00000483955 SOCS7O14512 581 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 CSF1RP07333 972 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 HCLS1P14317 486 aaPredicted RBP11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 SF3B3Q15393 1217 aaKnown RBP11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 CCDC57Q2TAC2 916 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 EPHA10Q5JZY3 1008 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 PDGFDQ9GZP0 370 aaPredicted RBP11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 CHMP3Q9Y3E7 222 aa11.22□□□□□ -0.61
SHROOM4-204ENST00000483955 TNRC6CQ9HCJ0 1690 aaKnown RBP11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 C10orf71Q711Q0 1435 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 IFIT5Q13325 482 aaKnown RBP11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 FAM161AQ3B820 660 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 HSP90AB4PQ58FF6 505 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 SYNE4Q8N205 404 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
SHROOM4-204ENST00000483955 ANKRD18BA2A2Z9 1011 aa11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 PDE6BP35913 854 aa11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 SIRT2Q8IXJ6 389 aa11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 LRP5O75197 1615 aa11.2□□□□□ -0.62
SHROOM4-204ENST00000483955 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 ITGA6P23229 1130 aa11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 CRY2Q49AN0 593 aa11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 GREM2Q9H772 168 aa11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 COPRSQ9NQ92 184 aa11.19□□□□□ -0.62
SHROOM4-204ENST00000483955 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 IGHMBP2P38935 993 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 NOP58Q9Y2X3 529 aaKnown RBP11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 ANKRD31Q8N7Z5 1873 aa11.18□□□□□ -0.62
SHROOM4-204ENST00000483955 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 SURF6O75683 361 aaKnown RBP11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 CIAO1O76071 339 aa11.17□□□□□ -0.62
SHROOM4-204ENST00000483955 IGHDP01880 384 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms