RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
RXRB-205ENST00000483821 FLAD1Q8NFF5 587 aa16.41■□□□□ 0.22
RXRB-205ENST00000483821 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
RXRB-205ENST00000483821 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
RXRB-205ENST00000483821 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
RXRB-205ENST00000483821 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
RXRB-205ENST00000483821 SDSP20132 328 aa16.4■□□□□ 0.22
RXRB-205ENST00000483821 SLC10A5Q5PT55 438 aa16.4■□□□□ 0.22
RXRB-205ENST00000483821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
RXRB-205ENST00000483821 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 PHF14O94880 888 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 ITGA6P23229 1130 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 TFCP2Q12800 502 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
RXRB-205ENST00000483821 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
RXRB-205ENST00000483821 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
RXRB-205ENST00000483821 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 HCLS1P14317 486 aaPredicted RBP16.38■□□□□ 0.21
RXRB-205ENST00000483821 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
RXRB-205ENST00000483821 GREM2Q9H772 168 aa16.38■□□□□ 0.21
RXRB-205ENST00000483821 TBC1D9Q6ZT07 1266 aa16.37■□□□□ 0.21
RXRB-205ENST00000483821 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
RXRB-205ENST00000483821 PROM2Q8N271 834 aa16.37■□□□□ 0.21
RXRB-205ENST00000483821 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
RXRB-205ENST00000483821 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
RXRB-205ENST00000483821 NPHP1O15259 732 aa16.36■□□□□ 0.21
RXRB-205ENST00000483821 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
RXRB-205ENST00000483821 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
RXRB-205ENST00000483821 ZNF594Q96JF6 807 aaPredicted RBP16.36■□□□□ 0.21
RXRB-205ENST00000483821 CDC5LQ99459 802 aaKnown RBP16.36■□□□□ 0.21
RXRB-205ENST00000483821 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
RXRB-205ENST00000483821 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
RXRB-205ENST00000483821 IGHMBP2P38935 993 aaKnown RBP16.35■□□□□ 0.21
RXRB-205ENST00000483821 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
RXRB-205ENST00000483821 ERFEQ4G0M1 354 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 RILPL2Q969X0 211 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
RXRB-205ENST00000483821 MPHOSPH8Q99549 860 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 MROH5Q6ZUA9 1318 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
RXRB-205ENST00000483821 ATP5JP18859 108 aa16.34■□□□□ 0.21
RXRB-205ENST00000483821 LRRC24Q50LG9 513 aa16.34■□□□□ 0.21
RXRB-205ENST00000483821 METTL24Q5JXM2 366 aa16.34■□□□□ 0.21
RXRB-205ENST00000483821 RIPOR2Q9Y4F9 1068 aa16.34■□□□□ 0.21
RXRB-205ENST00000483821 HIP1O00291 1037 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 REC8O95072 547 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 SEC24BO95487 1268 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
RXRB-205ENST00000483821 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 SMIM5Q71RC9 77 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
RXRB-205ENST00000483821 PUS3Q9BZE2 481 aaKnown RBP16.33■□□□□ 0.2
RXRB-205ENST00000483821 GYS1P13807 737 aa16.32■□□□□ 0.2
RXRB-205ENST00000483821 NFIXQ14938 502 aa16.32■□□□□ 0.2
RXRB-205ENST00000483821 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
RXRB-205ENST00000483821 AMIGO3Q86WK7 504 aa16.32■□□□□ 0.2
RXRB-205ENST00000483821 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
RXRB-205ENST00000483821 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
RXRB-205ENST00000483821 CCDC158Q5M9N0 1113 aa16.31■□□□□ 0.2
RXRB-205ENST00000483821 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
RXRB-205ENST00000483821 CNBD1Q8NA66 436 aa16.31■□□□□ 0.2
RXRB-205ENST00000483821 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
RXRB-205ENST00000483821 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
RXRB-205ENST00000483821 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
RXRB-205ENST00000483821 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
RXRB-205ENST00000483821 MYH3P11055 1940 aa16.3■□□□□ 0.2
RXRB-205ENST00000483821 A0A1B0GUL7 405 aa16.3■□□□□ 0.2
RXRB-205ENST00000483821 BAG6P46379 1132 aa16.3■□□□□ 0.2
RXRB-205ENST00000483821 ST5P78524 1137 aa16.3■□□□□ 0.2
RXRB-205ENST00000483821 ATP2B3Q16720 1220 aa16.3■□□□□ 0.2
RXRB-205ENST00000483821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.3■□□□□ 0.2
RXRB-205ENST00000483821 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
RXRB-205ENST00000483821 RGPD3A6NKT7 1758 aaPredicted RBP16.29■□□□□ 0.2
RXRB-205ENST00000483821 RGPD4Q7Z3J3 1758 aa16.29■□□□□ 0.2
RXRB-205ENST00000483821 MSH5O43196 834 aa16.29■□□□□ 0.2
RXRB-205ENST00000483821 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
RXRB-205ENST00000483821 PDE8BO95263 885 aa16.29■□□□□ 0.2
RXRB-205ENST00000483821 CHMLP26374 656 aa16.29■□□□□ 0.2
RXRB-205ENST00000483821 TM4SF1P30408 202 aa16.29■□□□□ 0.2
RXRB-205ENST00000483821 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
RXRB-205ENST00000483821 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
RXRB-205ENST00000483821 TIMM10P62072 90 aa16.28■□□□□ 0.2
RXRB-205ENST00000483821 PUM3Q15397 648 aaKnown RBP16.28■□□□□ 0.2
RXRB-205ENST00000483821 LRRFIP1Q32MZ4 808 aaKnown RBP16.28■□□□□ 0.2
RXRB-205ENST00000483821 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
RXRB-205ENST00000483821 CCDC125Q86Z20 511 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms