RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
COL2A1-206ENST00000483376 UBE3BQ7Z3V4 1068 aa20.61■□□□□ 0.89
COL2A1-206ENST00000483376 FER1L6Q2WGJ9 1857 aa20.6■□□□□ 0.89
COL2A1-206ENST00000483376 PPEF1O14829 653 aaPredicted RBP20.6■□□□□ 0.89
COL2A1-206ENST00000483376 IPO8O15397 1037 aaKnown RBP20.6■□□□□ 0.89
COL2A1-206ENST00000483376 CTSWP56202 376 aa20.6■□□□□ 0.89
COL2A1-206ENST00000483376 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
COL2A1-206ENST00000483376 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
COL2A1-206ENST00000483376 YY1P25490 414 aa20.59■□□□□ 0.89
COL2A1-206ENST00000483376 CCT4P50991 539 aaKnown RBP20.59■□□□□ 0.89
COL2A1-206ENST00000483376 ATP6V0A2Q9Y487 856 aa20.59■□□□□ 0.89
COL2A1-206ENST00000483376 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
COL2A1-206ENST00000483376 CSF1RP07333 972 aa20.58■□□□□ 0.89
COL2A1-206ENST00000483376 TTLL11Q8NHH1 800 aa20.58■□□□□ 0.89
COL2A1-206ENST00000483376 PSMD1Q99460 953 aa20.58■□□□□ 0.89
COL2A1-206ENST00000483376 CACNA1SQ13698 1873 aa20.58■□□□□ 0.88
COL2A1-206ENST00000483376 LMNB1P20700 586 aa20.57■□□□□ 0.88
COL2A1-206ENST00000483376 SP8Q8IXZ3 490 aa20.57■□□□□ 0.88
COL2A1-206ENST00000483376 JARID2Q92833 1246 aaPredicted RBP20.57■□□□□ 0.88
COL2A1-206ENST00000483376 TAOK3Q9H2K8 898 aa20.57■□□□□ 0.88
COL2A1-206ENST00000483376 BCAR3O75815 825 aa20.56■□□□□ 0.88
COL2A1-206ENST00000483376 FKBP4Q02790 459 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL2A1-206ENST00000483376 ATF7IPQ6VMQ6 1270 aa20.56■□□□□ 0.88
COL2A1-206ENST00000483376 C9orf78Q9NZ63 289 aaPredicted RBP20.56■□□□□ 0.88
COL2A1-206ENST00000483376 MYH3P11055 1940 aa20.56■□□□□ 0.88
COL2A1-206ENST00000483376 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
COL2A1-206ENST00000483376 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
COL2A1-206ENST00000483376 CELF1Q92879 486 aaKnown RBP20.55■□□□□ 0.88
COL2A1-206ENST00000483376 TMX4Q9H1E5 349 aaPredicted RBP20.55■□□□□ 0.88
COL2A1-206ENST00000483376 SBF1O95248 1867 aa20.55■□□□□ 0.88
COL2A1-206ENST00000483376 RASSF7Q02833 373 aa20.54■□□□□ 0.88
COL2A1-206ENST00000483376 C9orf131Q5VYM1 1079 aa20.54■□□□□ 0.88
COL2A1-206ENST00000483376 INTS3Q68E01 1043 aaKnown RBP20.54■□□□□ 0.88
COL2A1-206ENST00000483376 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
COL2A1-206ENST00000483376 VPS33BQ9H267 617 aa20.54■□□□□ 0.88
COL2A1-206ENST00000483376 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
COL2A1-206ENST00000483376 TRIM27P14373 513 aa20.53■□□□□ 0.88
COL2A1-206ENST00000483376 PRELPP51888 382 aa20.53■□□□□ 0.88
COL2A1-206ENST00000483376 FOXO4P98177 505 aa20.53■□□□□ 0.88
COL2A1-206ENST00000483376 RTFDC1Q9BY42 306 aaPredicted RBP20.53■□□□□ 0.88
COL2A1-206ENST00000483376 USP44Q9H0E7 712 aa20.53■□□□□ 0.88
COL2A1-206ENST00000483376 NBPF7P0C2Y1 421 aaPredicted RBP20.52■□□□□ 0.88
COL2A1-206ENST00000483376 ZKSCAN2Q63HK3 967 aa20.52■□□□□ 0.88
COL2A1-206ENST00000483376 OLFM4Q6UX06 510 aa20.52■□□□□ 0.88
COL2A1-206ENST00000483376 GREM2Q9H772 168 aa20.52■□□□□ 0.88
COL2A1-206ENST00000483376 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
COL2A1-206ENST00000483376 KAZALD1Q96I82 304 aa20.51■□□□□ 0.87
COL2A1-206ENST00000483376 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
COL2A1-206ENST00000483376 COL4A1P02462 1669 aa20.51■□□□□ 0.87
COL2A1-206ENST00000483376 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
COL2A1-206ENST00000483376 ANKRD18AQ8IVF6 992 aa20.5■□□□□ 0.87
COL2A1-206ENST00000483376 BSDC1Q9NW68 430 aaPredicted RBP20.5■□□□□ 0.87
COL2A1-206ENST00000483376 ITGA6P23229 1130 aa20.49■□□□□ 0.87
COL2A1-206ENST00000483376 SUPT20HQ8NEM7 779 aa20.49■□□□□ 0.87
COL2A1-206ENST00000483376 FRAT1Q92837 279 aaPredicted RBP20.49■□□□□ 0.87
COL2A1-206ENST00000483376 SUCLG2Q96I99 432 aa20.49■□□□□ 0.87
COL2A1-206ENST00000483376 PODXL2Q9NZ53 605 aa20.49■□□□□ 0.87
COL2A1-206ENST00000483376 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
COL2A1-206ENST00000483376 DICER1Q9UPY3 1922 aaKnown RBP20.49■□□□□ 0.87
COL2A1-206ENST00000483376 TAF1P21675 1872 aa20.48■□□□□ 0.87
COL2A1-206ENST00000483376 FAM161AQ3B820 660 aa20.48■□□□□ 0.87
COL2A1-206ENST00000483376 EPHA10Q5JZY3 1008 aa20.48■□□□□ 0.87
COL2A1-206ENST00000483376 MPNDQ8N594 471 aa20.48■□□□□ 0.87
COL2A1-206ENST00000483376 LTBP1Q14766 1721 aa20.47■□□□□ 0.87
COL2A1-206ENST00000483376 IARSP41252 1262 aaKnown RBP20.47■□□□□ 0.87
COL2A1-206ENST00000483376 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
COL2A1-206ENST00000483376 DPP8Q6V1X1 898 aaPredicted RBP20.47■□□□□ 0.87
COL2A1-206ENST00000483376 ZNF784Q8NCA9 323 aaPredicted RBP20.47■□□□□ 0.87
COL2A1-206ENST00000483376 CCDC85AQ96PX6 553 aaPredicted RBP20.47■□□□□ 0.87
COL2A1-206ENST00000483376 RCAN3Q9UKA8 241 aa20.47■□□□□ 0.87
COL2A1-206ENST00000483376 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
COL2A1-206ENST00000483376 ANKRD18BA2A2Z9 1011 aa20.46■□□□□ 0.87
COL2A1-206ENST00000483376 IFIT5Q13325 482 aaKnown RBP20.46■□□□□ 0.87
COL2A1-206ENST00000483376 SLC51AQ86UW1 340 aa20.46■□□□□ 0.87
COL2A1-206ENST00000483376 UBTFL1P0CB47 393 aaPredicted RBP20.45■□□□□ 0.86
COL2A1-206ENST00000483376 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
COL2A1-206ENST00000483376 BICC1Q9H694 974 aaKnown RBP20.45■□□□□ 0.86
COL2A1-206ENST00000483376 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
COL2A1-206ENST00000483376 GNAI3P08754 354 aa20.44■□□□□ 0.86
COL2A1-206ENST00000483376 MS4A1P11836 297 aa20.44■□□□□ 0.86
COL2A1-206ENST00000483376 CCDC57Q2TAC2 916 aa20.44■□□□□ 0.86
COL2A1-206ENST00000483376 DZIP1LQ8IYY4 767 aaKnown RBP20.44■□□□□ 0.86
COL2A1-206ENST00000483376 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
COL2A1-206ENST00000483376 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
COL2A1-206ENST00000483376 GPSM2P81274 684 aa20.43■□□□□ 0.86
COL2A1-206ENST00000483376 KIAA2012Q0VF49 1180 aa20.43■□□□□ 0.86
COL2A1-206ENST00000483376 MINPP1Q9UNW1 487 aa20.43■□□□□ 0.86
COL2A1-206ENST00000483376 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
COL2A1-206ENST00000483376 XDHP47989 1333 aa20.43■□□□□ 0.86
COL2A1-206ENST00000483376 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
COL2A1-206ENST00000483376 FZD9O00144 591 aa20.42■□□□□ 0.86
COL2A1-206ENST00000483376 FTSJ3Q8IY81 847 aaKnown RBP20.42■□□□□ 0.86
COL2A1-206ENST00000483376 MPHOSPH8Q99549 860 aa20.42■□□□□ 0.86
COL2A1-206ENST00000483376 TNNQ9UQP3 1299 aa20.42■□□□□ 0.86
COL2A1-206ENST00000483376 GLTPD2A6NH11 291 aa20.41■□□□□ 0.86
COL2A1-206ENST00000483376 TMEM57Q8N5G2 664 aa20.41■□□□□ 0.86
COL2A1-206ENST00000483376 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
COL2A1-206ENST00000483376 CLUAP1Q96AJ1 413 aa20.41■□□□□ 0.86
COL2A1-206ENST00000483376 MEIS3Q99687 375 aa20.41■□□□□ 0.86
COL2A1-206ENST00000483376 PPIP5K2O43314 1243 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms