RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 NFIXQ14938 502 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 HLFQ16534 295 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.8□□□□□ -1.48
HDAC9-224ENST00000483142 NLRP10Q86W26 655 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 TMEM57Q8N5G2 664 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 TMEM106CQ9BVX2 250 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 SRCIN1Q9C0H9 1055 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 TFCP2L1Q9NZI6 479 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 SRP68Q9UHB9 627 aaKnown RBP5.8□□□□□ -1.48
HDAC9-224ENST00000483142 DDX19BQ9UMR2 479 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 TBC1D2BQ9UPU7 963 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 ARFGEF1Q9Y6D6 1849 aa5.8□□□□□ -1.48
HDAC9-224ENST00000483142 SH3TC1Q8TE82 1336 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 H7C1W4 665 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 GRM8O00222 908 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 ZPR1O75312 459 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 PHF14O94880 888 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 RFC4P35249 363 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 RABL6Q3YEC7 729 aaPredicted RBP5.79□□□□□ -1.48
HDAC9-224ENST00000483142 C20orf194Q5TEA3 1177 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 TBC1D9BQ66K14 1250 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 RIC3Q7Z5B4 369 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
HDAC9-224ENST00000483142 NLGN1Q8N2Q7 840 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 MYD88Q99836 296 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 MTFR1LQ9H019 292 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 CWC25Q9NXE8 425 aaPredicted RBP5.79□□□□□ -1.48
HDAC9-224ENST00000483142 DUOX1Q9NRD9 1551 aa5.79□□□□□ -1.48
HDAC9-224ENST00000483142 KLRG2A4D1S0 409 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 TTLL13PA6NNM8 815 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 ZBTB7BO15156 539 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 EVX2Q03828 476 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 AIMP1Q12904 312 aaKnown RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 CAMK2BQ13554 666 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 CWF19L2Q2TBE0 894 aaKnown RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 CRY2Q49AN0 593 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 SLC10A5Q5PT55 438 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 ERICH6BQ5W0A0 696 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 PRR5LQ6MZQ0 368 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 SMIM5Q71RC9 77 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 NPM2Q86SE8 214 aaKnown RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 ZBTB38Q8NAP3 1195 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 PANK1Q8TE04 598 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 FRAT1Q92837 279 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 KAZALD1Q96I82 304 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 MEIS3Q99687 375 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 NYXQ9GZU5 481 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 USP44Q9H0E7 712 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 CHMP4BQ9H444 224 aaKnown RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 BMP2KQ9NSY1 1161 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 ZBTB40Q9NUA8 1239 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 NIP7Q9Y221 180 aaKnown RBP eCLIP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 ZNF330Q9Y3S2 320 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 ARIH1Q9Y4X5 557 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 SUPT16HQ9Y5B9 1047 aaKnown RBP5.78□□□□□ -1.48
HDAC9-224ENST00000483142 SPEF2Q9C093 1822 aa5.78□□□□□ -1.48
HDAC9-224ENST00000483142 PLIN1O60240 522 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 GNAI3P08754 354 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 TIE1P35590 1138 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 PTGER2P43116 358 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 E2F4Q16254 413 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 SUSD4Q5VX71 490 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 PPP1R42Q7Z4L9 355 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 ANKRD44Q8N8A2 993 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 CNBD1Q8NA66 436 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 CLUAP1Q96AJ1 413 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 PDGFDQ9GZP0 370 aaPredicted RBP5.77□□□□□ -1.49
HDAC9-224ENST00000483142 COG6Q9Y2V7 657 aa5.77□□□□□ -1.49
HDAC9-224ENST00000483142 ZNF646O15015 1829 aaPredicted RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 ATP5J2-PTCD1G3V325 749 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 SERPINB2P05120 415 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 CSF1RP07333 972 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 MMP10P09238 476 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 NBPF7P0C2Y1 421 aaPredicted RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 UBTFL1P0CB47 393 aaPredicted RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 HSP90B1P14625 803 aaKnown RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 GPTP24298 496 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 R3HDM1Q15032 1099 aaKnown RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 SF3B3Q15393 1217 aaKnown RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 SLC4A10Q6U841 1118 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 ITPRIPQ8IWB1 547 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 SUCLG2Q96I99 432 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 CRBNQ96SW2 442 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 UTP14AQ9BVJ6 771 aaKnown RBP5.76□□□□□ -1.49
HDAC9-224ENST00000483142 PDZRN3Q9UPQ7 1066 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 HDAC5Q9UQL6 1122 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 CACNA1SQ13698 1873 aa5.76□□□□□ -1.49
HDAC9-224ENST00000483142 ZNF609O15014 1411 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 TESPA1A2RU30 521 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-224ENST00000483142 GALR2O43603 387 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-224ENST00000483142 PDE8AO60658 829 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 HOXA10P31260 410 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-224ENST00000483142 RFX5P48382 616 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-224ENST00000483142 CTSWP56202 376 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 FOXO4P98177 505 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 EPHA10Q5JZY3 1008 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 CEP85Q6P2H3 762 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 TPTE2Q6XPS3 522 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 UBE3BQ7Z3V4 1068 aa5.75□□□□□ -1.49
HDAC9-224ENST00000483142 NBPF5PQ86XG9 351 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms