RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
SPTLC1-206ENST00000482632 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
SPTLC1-206ENST00000482632 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
SPTLC1-206ENST00000482632 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
SPTLC1-206ENST00000482632 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 SH3TC1Q8TE82 1336 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 NPR1P16066 1061 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 SYNE4Q8N205 404 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 TAF1P21675 1872 aa12.74□□□□□ -0.37
SPTLC1-206ENST00000482632 ADCY9O60503 1353 aa12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 SRGNP10124 158 aa12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1-206ENST00000482632 MYH3P11055 1940 aa12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 RNF123Q5XPI4 1314 aa12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 F6X3S4 739 aa12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 C21orf2O43822 256 aa12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 DCBLD2Q96PD2 775 aa12.72□□□□□ -0.37
SPTLC1-206ENST00000482632 RASSF7Q02833 373 aa12.71□□□□□ -0.37
SPTLC1-206ENST00000482632 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
SPTLC1-206ENST00000482632 CCDC191Q8NCU4 936 aa12.71□□□□□ -0.37
SPTLC1-206ENST00000482632 SBF1O95248 1867 aa12.71□□□□□ -0.37
SPTLC1-206ENST00000482632 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
SPTLC1-206ENST00000482632 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
SPTLC1-206ENST00000482632 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1-206ENST00000482632 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
SPTLC1-206ENST00000482632 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
SPTLC1-206ENST00000482632 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1-206ENST00000482632 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
SPTLC1-206ENST00000482632 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 NEURL1BA8MQ27 555 aa12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 IGKV5-2P06315 115 aa12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 FER1L6Q2WGJ9 1857 aa12.69□□□□□ -0.38
SPTLC1-206ENST00000482632 KLRG2A4D1S0 409 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 PPEF1O14829 653 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 PCCAP05165 728 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 HSP90B1P14625 803 aaKnown RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 CRY2Q49AN0 593 aa12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 RNF181Q9P0P0 153 aa12.68□□□□□ -0.38
SPTLC1-206ENST00000482632 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 CT47B1P0C2W7 299 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 ALDH1L2Q3SY69 923 aa12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 SOGA3Q5TF21 947 aa12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 C9orf131Q5VYM1 1079 aa12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 LINS1Q8NG48 757 aa12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
SPTLC1-206ENST00000482632 ABCC4O15439 1325 aa12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 PDE8AO60658 829 aa12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 HSPA6P17066 643 aa12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 GCKRQ14397 625 aa12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
SPTLC1-206ENST00000482632 PTPRCP08575 1304 aa12.65□□□□□ -0.38
SPTLC1-206ENST00000482632 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
SPTLC1-206ENST00000482632 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1-206ENST00000482632 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
SPTLC1-206ENST00000482632 C9orf78Q9NZ63 289 aaPredicted RBP12.65□□□□□ -0.38
SPTLC1-206ENST00000482632 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
SPTLC1-206ENST00000482632 NFKBIEO00221 500 aa12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 STK25O00506 426 aa12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 GRAPQ13588 217 aa12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 BEND3Q5T5X7 828 aa12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 NOB1Q9ULX3 412 aaKnown RBP12.64□□□□□ -0.39
SPTLC1-206ENST00000482632 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 CDHR2Q9BYE9 1310 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 PCNTO95613 3336 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 LMNB1P20700 586 aa12.63□□□□□ -0.39
SPTLC1-206ENST00000482632 CTSWP56202 376 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms